ORF » Species Summary » Rattus norvegicus » Hoxa1 cDNA ORF clone

Hoxa1 cDNA ORF clone, Rattus norvegicus(Norway rat)

The following Hoxa1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hoxa1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa52207 NM_001309364.1
Latest version!		 Rattus norvegicus homeobox A1 (Hoxa1), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $69.30
$99.00
ORa40314 NM_013075.2
Latest version!		 Rattus norvegicus homeobox A1 (Hoxa1), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    Hoxa1 ( NM_001309364.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001296293.1 Rattus norvegicus homeobox A1 (Hoxa1), transcript variant 2, mRNA.
    Price & Availability↑
    CloneID ORa52207
    Clone ID Related Accession (Same CDS sequence) NM_001309364.1
    Accession Version NM_001309364.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 411bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-19
    Organism Rattus norvegicus(Norway rat)
    Product homeobox protein Hox-A1 isoform 2
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC122669.6. On or before Jun 2, 2015 this sequence version replaced XM_008773708.1, XM_008762938.1, XM_008775737.1. Transcript Variant: This variant (2) uses an alternate splice site in the 5' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 2, which has a shorter and distinct C-terminus, compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: EV772275.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906348, SAMN01906350 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    ATGGACAATG CAAGAATGAA CTCCTTTCTG GAATACCCCA TCCTTGGCAG TGGCGATTCT 
    GGGACCTGCT CGGCGCGAGT TTACTCCTCT GACCATGGAA TTACAACTTT CCAATCCTGC 
    GCGGTCAGTG CCAACAGCTG CGGCGGCGAC GACCGCTTCC TAGGGGGCAG GGGGGTGCAG 
    ATCACCTCGC CCCATCACCA CCACCACCAC CATCACCATC CCCAGCCGGC TACTTACCAG 
    ACTTCTGGGA ACCTTGGGGT TTCTTATTCC CACTCGAGTT GTGGTCCAAG CTATGGCGCG 
    CAGAACTTCA GTGCGCCTTA TGGCCCCTAT GGATTAAATC AGGAAGCAGA CCCACCAAGA 
    AGCCTGTCGT TCCCCTGCTT CAGAGACGTC TTCTCCAGCG CAGACCTTTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001296293.1
    CDS16..426
    Translation

    Target ORF information:

    RefSeq Version NM_001309364.1
    Organism Rattus norvegicus(Norway rat)
    Definition Rattus norvegicus homeobox A1 (Hoxa1), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001309364.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    ATGGACAATG CAAGAATGAA CTCCTTTCTG GAATACCCCA TCCTTGGCAG TGGCGATTCT 
    GGGACCTGCT CGGCGCGAGT TTACTCCTCT GACCATGGAA TTACAACTTT CCAATCCTGC 
    GCGGTCAGTG CCAACAGCTG CGGCGGCGAC GACCGCTTCC TAGGGGGCAG GGGGGTGCAG 
    ATCACCTCGC CCCATCACCA CCACCACCAC CATCACCATC CCCAGCCGGC TACTTACCAG 
    ACTTCTGGGA ACCTTGGGGT TTCTTATTCC CACTCGAGTT GTGGTCCAAG CTATGGCGCG 
    CAGAACTTCA GTGCGCCTTA TGGCCCCTAT GGATTAAATC AGGAAGCAGA CCCACCAAGA 
    AGCCTGTCGT TCCCCTGCTT CAGAGACGTC TTCTCCAGCG CAGACCTTTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    Hoxa1 ( NM_013075.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_037207.2 Rattus norvegicus homeobox A1 (Hoxa1), transcript variant 1, mRNA.
    Price & Availability↑
    CloneID ORa40314
    Clone ID Related Accession (Same CDS sequence) NM_013075.2
    Accession Version NM_013075.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1005bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-19
    Organism Rattus norvegicus(Norway rat)
    Product homeobox protein Hox-A1 isoform 1
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC122669.6. On or before Jun 2, 2015 this sequence version replaced XM_008762937.1, XM_008775736.1, NM_013075.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA2689601, SAMN01906347 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGACAATG CAAGAATGAA CTCCTTTCTG GAATACCCCA TCCTTGGCAG TGGCGATTCT 
    GGGACCTGCT CGGCGCGAGT TTACTCCTCT GACCATGGAA TTACAACTTT CCAATCCTGC 
    GCGGTCAGTG CCAACAGCTG CGGCGGCGAC GACCGCTTCC TAGGGGGCAG GGGGGTGCAG 
    ATCACCTCGC CCCATCACCA CCACCACCAC CATCACCATC CCCAGCCGGC TACTTACCAG 
    ACTTCTGGGA ACCTTGGGGT TTCTTATTCC CACTCGAGTT GTGGTCCAAG CTATGGCGCG 
    CAGAACTTCA GTGCGCCTTA TGGCCCCTAT GGATTAAATC AGGAAGCAGA CGTAAGTGGT 
    GGGTACCCCC CGTGCGCTCC CGCTGTTTAC TCTGGAAACC TCTCGTCTCC CATGGTCCAG 
    CATCACCACC ACCACCAGGG TTATGCTGGG GGCACAGTGG GCTCGCCCCA GTACATTCAC 
    CACTCATATG GACAAGAGCA CCAGAGTCTG GCCCTGGCCA CGTATAATAA CTCCTTATCC 
    CCTCTCCACG CCAGCCACCA AGAAGCCTGT CGTTCCCCTG CTTCAGAGAC GTCTTCTCCA 
    GCGCAGACCT TTGACTGGAT GAAAGTTAAA AGAAACCCTC CCAAAACAGG GAAAGTTGGA 
    GAGTATGGCT ACGTGGGTCA ACCCAACGCA GTGCGCACCA ACTTCACCAC CAAGCAGCTC 
    ACAGAGCTGG AGAAGGAGTT CCACTTCAAC AAGTACCTAA CAAGAGCCCG CAGGGTGGAG 
    ATAGCCGCGT CCCTGCAACT CAATGAGACC CAGGTGAAGA TCTGGTTCCA GAATCGCCGC 
    ATGAAGCAGA AGAAGCGCGA GAAAGAGGGG CTCTTGCCCA TTTCACCCGC CACCCCTCCT 
    GGAAGCGATG AGAAAACTGA AGAATCATCT GAGAAATCCA GCTCCTCGCC CAGCGCCCCT 
    TCTCCCGCAT CATCTACCTC AGATACTCTG ACTACCTCCC ACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_037207.2
    CDS16..1020
    Translation

    Target ORF information:

    RefSeq Version NM_013075.2
    Organism Rattus norvegicus(Norway rat)
    Definition Rattus norvegicus homeobox A1 (Hoxa1), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_013075.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGACAATG CAAGAATGAA CTCCTTTCTG GAATACCCCA TCCTTGGCAG TGGCGATTCT 
    GGGACCTGCT CGGCGCGAGT TTACTCCTCT GACCATGGAA TTACAACTTT CCAATCCTGC 
    GCGGTCAGTG CCAACAGCTG CGGCGGCGAC GACCGCTTCC TAGGGGGCAG GGGGGTGCAG 
    ATCACCTCGC CCCATCACCA CCACCACCAC CATCACCATC CCCAGCCGGC TACTTACCAG 
    ACTTCTGGGA ACCTTGGGGT TTCTTATTCC CACTCGAGTT GTGGTCCAAG CTATGGCGCG 
    CAGAACTTCA GTGCGCCTTA TGGCCCCTAT GGATTAAATC AGGAAGCAGA CGTAAGTGGT 
    GGGTACCCCC CGTGCGCTCC CGCTGTTTAC TCTGGAAACC TCTCGTCTCC CATGGTCCAG 
    CATCACCACC ACCACCAGGG TTATGCTGGG GGCACAGTGG GCTCGCCCCA GTACATTCAC 
    CACTCATATG GACAAGAGCA CCAGAGTCTG GCCCTGGCCA CGTATAATAA CTCCTTATCC 
    CCTCTCCACG CCAGCCACCA AGAAGCCTGT CGTTCCCCTG CTTCAGAGAC GTCTTCTCCA 
    GCGCAGACCT TTGACTGGAT GAAAGTTAAA AGAAACCCTC CCAAAACAGG GAAAGTTGGA 
    GAGTATGGCT ACGTGGGTCA ACCCAACGCA GTGCGCACCA ACTTCACCAC CAAGCAGCTC 
    ACAGAGCTGG AGAAGGAGTT CCACTTCAAC AAGTACCTAA CAAGAGCCCG CAGGGTGGAG 
    ATAGCCGCGT CCCTGCAACT CAATGAGACC CAGGTGAAGA TCTGGTTCCA GAATCGCCGC 
    ATGAAGCAGA AGAAGCGCGA GAAAGAGGGG CTCTTGCCCA TTTCACCCGC CACCCCTCCT 
    GGAAGCGATG AGAAAACTGA AGAATCATCT GAGAAATCCA GCTCCTCGCC CAGCGCCCCT 
    TCTCCCGCAT CATCTACCTC AGATACTCTG ACTACCTCCC ACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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