Gene Symbol | TM9SF1 |
Entrez Gene ID | 744934 |
Full Name | transmembrane 9 superfamily member 1 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » TM9SF1 cDNA ORF clone
Gene Symbol | TM9SF1 |
Entrez Gene ID | 744934 |
Full Name | transmembrane 9 superfamily member 1 |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
NM_001280486.1 | NP_001267415.1 | transmembrane 9 superfamily member 1 precursor |
XM_016925817.1 | XP_016781306.1 | transmembrane 9 superfamily member 1 isoform X1 |
XM_024348586.1 | XP_024204354.1 | transmembrane 9 superfamily member 1 isoform X1 |
XM_024348587.1 | XP_024204355.1 | transmembrane 9 superfamily member 1 isoform X1 |
XM_024348589.1 | XP_024204357.1 | transmembrane 9 superfamily member 1 isoform X1 |
XM_024348591.1 | XP_024204359.1 | transmembrane 9 superfamily member 1 isoform X2 |
XM_016925818.1 | XP_016781307.1 | transmembrane 9 superfamily member 1 isoform X2 |
XM_024348588.1 | XP_024204356.1 | transmembrane 9 superfamily member 1 isoform X1 |
XM_024348590.1 | XP_024204358.1 | transmembrane 9 superfamily member 1 isoform X1 |
Oryza sativa (rice) | Os03g0237000 | NP_001049492.1 |
Pan troglodytes (chimpanzee) | TM9SF1 | XP_003314316.1 |
Danio rerio (zebrafish) | tm9sf1 | NP_001003550.1 |
Arabidopsis thaliana (thale cress) | AT2G01970 | NP_178306.1 |
Xenopus tropicalis (tropical clawed frog) | tm9sf1 | XP_004910820.1 |
TM9SF1 | XP_001112694.1 | |
Rattus norvegicus (Norway rat) | Tm9sf1 | NP_001012155.1 |
Arabidopsis thaliana (thale cress) | AT1G14670 | NP_172919.1 |
Homo sapiens (human) | TM9SF1 | NP_006396.2 |
Canis lupus familiaris (dog) | TM9SF1 | XP_537385.2 |
Bos taurus (cattle) | TM9SF1 | NP_001077212.1 |
Mus musculus (house mouse) | Tm9sf1 | NP_083056.2 |
Oryza sativa (rice) | Os10g0112600 | NP_001064040.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TM9SF1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TM9SF1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00830 | |
Clone ID Related Accession (Same CDS sequence) | NM_001280486.1 | |
Accession Version | NM_001280486.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1821bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-04 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK305337.1. On Jul 22, 2013 this sequence version replaced XM_003314268.2. ##Evidence-Data-START## Transcript exon combination :: AK305337.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01120800, SAMN01120804 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001267415.1 |
CDS | 105..1925 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001280486.1 |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc17666 | |
Clone ID Related Accession (Same CDS sequence) | XM_016925817.1 | |
Accession Version | XM_016925817.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 798bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006481.4) and transcript sequence (GABC01020328.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 402 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTCGCGGC GGCGCCCTGA GGACGGATTG GGCAAGGCTG GTCCCTGTGT GATGAGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016781306.1 |
CDS | 243..1040 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016925817.1 |
1 | ATGTCGCGGC GGCGCCCTGA GGACGGATTG GGCAAGGCTG GTCCCTGTGT GATGAGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc67774 | |
Clone ID Related Accession (Same CDS sequence) | XM_016925818.1 | |
Accession Version | XM_016925818.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2577bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006481.4) and transcript sequence (GABC01020328.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 402 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTCGCGGC GGCGCCCTGA GGACGGATTG GGCAAGGCTG GTCCCTGTGT GATGAGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016781307.1 |
CDS | 243..2819 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016925818.1 |
1 | ATGTCGCGGC GGCGCCCTGA GGACGGATTG GGCAAGGCTG GTCCCTGTGT GATGAGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc97224 | |
Clone ID Related Accession (Same CDS sequence) | XM_024348586.1 , XM_024348587.1 , XM_024348589.1 , XM_024348588.1 , XM_024348590.1 | |
Accession Version | XM_024348586.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1821bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024204354.1 |
CDS | 1526..3346 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024348586.1 |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc97224 | |
Clone ID Related Accession (Same CDS sequence) | XM_024348586.1 , XM_024348587.1 , XM_024348589.1 , XM_024348588.1 , XM_024348590.1 | |
Accession Version | XM_024348587.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1821bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024204355.1 |
CDS | 1564..3384 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024348587.1 |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc97224 | |
Clone ID Related Accession (Same CDS sequence) | XM_024348586.1 , XM_024348587.1 , XM_024348589.1 , XM_024348588.1 , XM_024348590.1 | |
Accession Version | XM_024348589.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1821bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024204357.1 |
CDS | 85..1905 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024348589.1 |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc97224 | |
Clone ID Related Accession (Same CDS sequence) | XM_024348586.1 , XM_024348587.1 , XM_024348589.1 , XM_024348588.1 , XM_024348590.1 | |
Accession Version | XM_024348588.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1821bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024204356.1 |
CDS | 1542..3362 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024348588.1 |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc97224 | |
Clone ID Related Accession (Same CDS sequence) | XM_024348586.1 , XM_024348587.1 , XM_024348589.1 , XM_024348588.1 , XM_024348590.1 | |
Accession Version | XM_024348590.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1821bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024204358.1 |
CDS | 1323..3143 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024348590.1 |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc97225 | |
Clone ID Related Accession (Same CDS sequence) | XM_024348591.1 | |
Accession Version | XM_024348591.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1635bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | transmembrane 9 superfamily member 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024204359.1 |
CDS | 1528..3162 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024348591.1 |
1 | ATGACAGTCG TAGGGAACCC TCGAAGTTGG AGCTGCCAGT GGTTGCCAAT CCTGATACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |