LTA cDNA ORF clone, Pan troglodytes(chimpanzee)

Gene
Clones
gRNAs

Summary

Gene Symbol	LTA
Entrez Gene ID	494185
Full Name	lymphotoxin alpha
Synonyms	TNLG1E
General protein information	Preferred Names lymphotoxin alpha Names lymphotoxin-alpha LT-alpha TNF superfamily, member 1 TNF-beta tumor necrosis factor ligand 1E tumor necrosis factor ligand superfamily member 1
Gene Type	protein-coding
Organism	Pan troglodytes(chimpanzee)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009450863.2	XP_009449138.1	lymphotoxin-alpha isoform X1
XM_009450863.3	XP_009449138.1	lymphotoxin-alpha isoform X1
XM_016954736.2	XP_016810225.1	lymphotoxin-alpha isoform X1
NM_001045510.1	NP_001038975.1	lymphotoxin-alpha precursor
XM_016954736.1	XP_016810225.1	lymphotoxin-alpha isoform X1

Pathways from BioSystems

Homologies

	LTA	NP_001040613.1
Homo sapiens (human)	LTA	NP_000586.2
Pan troglodytes (chimpanzee)	LTA	NP_001038975.1
Canis lupus familiaris (dog)	LTA	XP_848886.2
Bos taurus (cattle)	LTA	NP_001013419.1
Mus musculus (house mouse)	Lta	NP_034865.1
Rattus norvegicus (Norway rat)	Lta	NP_542947.1
Xenopus tropicalis (tropical clawed frog)	lta	NP_001107150.1

Gene Ontology
Bibliography

Related articles in PubMed

Comparative genomic analysis of eutherian tumor necrosis factor ligand genes.
Premzl M
Immunogenetics68(2)125-32(2016 Feb)

Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity.
Shiina T, Ota M, Shimizu S, Katsuyama Y, Hashimoto N, Takasu M, Anzai T, Kulski JK, Kikkawa E, Naruse T, Kimura N, Yanagiya K, Watanabe A, Hosomichi K, Kohara S, Iwamoto C, Umehara Y, Meyer A, Wanner V, Sano K, Macquin C, Ikeo K, Tokunaga K, Gojobori T, Inoko H, Bahram S
Genetics173(3)1555-70(2006 Jul)

Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence.
Anzai T, Shiina T, Kimura N, Yanagiya K, Kohara S, Shigenari A, Yamagata T, Kulski JK, Naruse TK, Fujimori Y, Fukuzumi Y, Yamazaki M, Tashiro H, Iwamoto C, Umehara Y, Imanishi T, Meyer A, Ikeo K, Gojobori T, Bahram S, Inoko H
Proceedings of the National Academy of Sciences of the United States of America100(13)7708-13(2003 Jun)

Comparative genomic analysis of the MHC: the evolution of class I duplication blocks, diversity and complexity from shark to man.
Kulski JK, Shiina T, Anzai T, Kohara S, Inoko H
Immunological reviews19095-122(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LTA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LTA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OPc00416	NM_001045510.1 Latest version!	Pan troglodytes lymphotoxin alpha (LTA), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OPc00416	XM_016954736.2 Latest version!	Pan troglodytes lymphotoxin alpha (LTA), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OPc00416	XM_009450863.3 Latest version!	Pan troglodytes lymphotoxin alpha (LTA), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
View Old Accession Versions >>
OPc00416	XM_009450863.2	Pan troglodytes lymphotoxin alpha (LTA), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OPc00416	XM_016954736.1	Pan troglodytes lymphotoxin alpha (LTA), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone	40% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LTA ( NM_001045510.1 ) cDNA ORF clone, Pan troglodytes(chimpanzee) -> NP_001038975.1 Pan troglodytes lymphotoxin alpha (LTA), mRNA.

Price & Availability↑

CloneID	OPc00416
Clone ID Related Accession (Same CDS sequence)	XM_009450863.2 , XM_009450863.3 , XM_016954736.2 , NM_001045510.1 , XM_016954736.1
Accession Version	NM_001045510.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-20
Organism	Pan troglodytes(chimpanzee)
Product	lymphotoxin-alpha precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BA000041.2. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN02045701, SAMN03018695 [ECO:0000348] ##Evidence-Data-END##

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001038975.1
CDS	1..618
Translation	MTPPERLFLPRVRGTTLHLLLLGLLLVLLPGAQGLPGVGLTPSAAQTARQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL

Target ORF information:

RefSeq Version	NM_001045510.1
Organism	Pan troglodytes(chimpanzee)
Definition	Pan troglodytes lymphotoxin alpha (LTA), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001045510.1

ORF Insert Sequence:

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LTA ( XM_009450863.2 ) cDNA ORF clone, Pan troglodytes(chimpanzee) -> XP_009449138.1 Pan troglodytes lymphotoxin alpha (LTA), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OPc00416
Clone ID Related Accession (Same CDS sequence)	XM_009450863.2 , XM_009450863.3 , XM_016954736.2 , NM_001045510.1 , XM_016954736.1
Accession Version	XM_009450863.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-01
Organism	Pan troglodytes(chimpanzee)
Product	lymphotoxin-alpha isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 2, 2016 this sequence version replaced XM_009450863.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009449138.1
CDS	894..1511
Translation	MTPPERLFLPRVRGTTLHLLLLGLLLVLLPGAQGLPGVGLTPSAAQTARQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL

Target ORF information:

RefSeq Version	XM_009450863.2
Organism	Pan troglodytes(chimpanzee)
Definition	Pan troglodytes lymphotoxin alpha (LTA), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009450863.2

ORF Insert Sequence:

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LTA ( XM_009450863.3 ) cDNA ORF clone, Pan troglodytes(chimpanzee) -> XP_009449138.1 Pan troglodytes lymphotoxin alpha (LTA), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OPc00416
Clone ID Related Accession (Same CDS sequence)	XM_009450863.2 , XM_009450863.3 , XM_016954736.2 , NM_001045510.1 , XM_016954736.1
Accession Version	XM_009450863.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-03-19
Organism	Pan troglodytes(chimpanzee)
Product	lymphotoxin-alpha isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_009450863.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009449138.1
CDS	902..1519
Translation	MTPPERLFLPRVRGTTLHLLLLGLLLVLLPGAQGLPGVGLTPSAAQTARQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL

Target ORF information:

RefSeq Version	XM_009450863.3
Organism	Pan troglodytes(chimpanzee)
Definition	Pan troglodytes lymphotoxin alpha (LTA), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009450863.3

ORF Insert Sequence:

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LTA ( XM_016954736.2 ) cDNA ORF clone, Pan troglodytes(chimpanzee) -> XP_016810225.1 Pan troglodytes lymphotoxin alpha (LTA), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OPc00416
Clone ID Related Accession (Same CDS sequence)	XM_009450863.2 , XM_009450863.3 , XM_016954736.2 , NM_001045510.1 , XM_016954736.1
Accession Version	XM_016954736.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-03-19
Organism	Pan troglodytes(chimpanzee)
Product	lymphotoxin-alpha isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036885.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016954736.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016810225.1
CDS	758..1375
Translation	MTPPERLFLPRVRGTTLHLLLLGLLLVLLPGAQGLPGVGLTPSAAQTARQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL

Target ORF information:

RefSeq Version	XM_016954736.2
Organism	Pan troglodytes(chimpanzee)
Definition	Pan troglodytes lymphotoxin alpha (LTA), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016954736.2

ORF Insert Sequence:

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LTA ( XM_016954736.1 ) cDNA ORF clone, Pan troglodytes(chimpanzee) -> XP_016810225.1 Pan troglodytes lymphotoxin alpha (LTA), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OPc00416
Clone ID Related Accession (Same CDS sequence)	XM_009450863.2 , XM_009450863.3 , XM_016954736.2 , NM_001045510.1 , XM_016954736.1
Accession Version	XM_016954736.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-01
Organism	Pan troglodytes(chimpanzee)
Product	lymphotoxin-alpha isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006473.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016810225.1
CDS	750..1367
Translation	MTPPERLFLPRVRGTTLHLLLLGLLLVLLPGAQGLPGVGLTPSAAQTARQHPKMHLAHSTLKPAAHLIGDPSKQNSLLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFSGKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMVYPGLQEPWLHSMYHGAAFQLTQGDQLSTHTDGIPHLVLSPSTVFFGAFAL

Target ORF information:

RefSeq Version	XM_016954736.1
Organism	Pan troglodytes(chimpanzee)
Definition	Pan troglodytes lymphotoxin alpha (LTA), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016954736.1

ORF Insert Sequence:

ATGACACCAC CTGAACGTCT CTTCCTCCCA AGGGTGCGTG GCACCACCCT ACACCTCCTC 
CTTCTGGGGC TGCTGCTGGT TCTGCTGCCT GGGGCCCAGG GGCTCCCTGG TGTTGGCCTC 
ACACCTTCAG CTGCCCAGAC TGCCCGTCAG CACCCCAAGA TGCATCTTGC CCACAGCACC 
CTCAAACCTG CTGCTCACCT CATTGGAGAC CCCAGCAAGC AGAACTCACT GCTCTGGAGA 
GCAAACACGG ACCGTGCCTT CCTCCAGGAT GGTTTCTCCT TGAGCAACAA TTCTCTCCTG 
GTCCCCACCA GTGGCATCTA CTTCGTCTAC TCCCAGGTGG TCTTCTCTGG GAAAGCCTAC 
TCTCCCAAGG CCACCTCCTC CCCACTCTAC CTGGCCCATG AGGTCCAGCT CTTCTCCTCC 
CAGTACCCCT TCCACGTGCC TCTCCTCAGC TCCCAGAAGA TGGTGTATCC AGGGCTGCAG 
GAACCCTGGC TGCACTCGAT GTACCATGGG GCTGCGTTCC AGCTCACCCA GGGAGACCAG 
CTATCCACCC ACACAGATGG CATCCCCCAC CTAGTCCTCA GCCCTAGTAC TGTCTTCTTT 
GGAGCCTTCG CTCTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Comparative genomic analysis of eutherian tumor necrosis factor ligand genes.
Immunogenetics68(2)125-32(2016 Feb)
Premzl M

Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity.
Genetics173(3)1555-70(2006 Jul)
Shiina T,Ota M,Shimizu S,Katsuyama Y,Hashimoto N,Takasu M,Anzai T,Kulski JK,Kikkawa E,Naruse T,Kimura N,Yanagiya K,Watanabe A,Hosomichi K,Kohara S,Iwamoto C,Umehara Y,Meyer A,Wanner V,Sano K,Macquin C,Ikeo K,Tokunaga K,Gojobori T,Inoko H,Bahram S

Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence.
Proceedings of the National Academy of Sciences of the United States of America100(13)7708-13(2003 Jun)
Anzai T,Shiina T,Kimura N,Yanagiya K,Kohara S,Shigenari A,Yamagata T,Kulski JK,Naruse TK,Fujimori Y,Fukuzumi Y,Yamazaki M,Tashiro H,Iwamoto C,Umehara Y,Imanishi T,Meyer A,Ikeo K,Gojobori T,Bahram S,Inoko H

Comparative genomic analysis of the MHC: the evolution of class I duplication blocks, diversity and complexity from shark to man.
Immunological reviews19095-122(2002 Dec)
Kulski JK,Shiina T,Anzai T,Kohara S,Inoko H

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LTA cDNA ORF clone, Pan troglodytes(chimpanzee)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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