Gene Symbol | TRAPPC6A |
Entrez Gene ID | 713880 |
Full Name | trafficking protein particle complex 6A |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » TRAPPC6A cDNA ORF clone
Gene Symbol | TRAPPC6A |
Entrez Gene ID | 713880 |
Full Name | trafficking protein particle complex 6A |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
NM_001194478.1 | NP_001181407.1 | trafficking protein particle complex subunit 6A |
XM_002801293.2 | XP_002801339.1 | trafficking protein particle complex subunit 6A isoform X1 |
XM_015124121.1 | XP_014979607.1 | trafficking protein particle complex subunit 6A isoform X2 |
NM_001194478.3 | NP_001181407.2 | trafficking protein particle complex subunit 6A |
NM_001194478.2 | NP_001181407.1 | trafficking protein particle complex subunit 6A |
XM_015124121.2 | XP_014979607.2 | trafficking protein particle complex subunit 6A isoform X2 |
XM_002801293.3 | XP_002801339.2 | trafficking protein particle complex subunit 6A isoform X1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TRAPPC6A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRAPPC6A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb00199 | |
Clone ID Related Accession (Same CDS sequence) | NM_001194478.1 | |
Accession Version | NM_001194478.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 522bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2014-02-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | trafficking protein particle complex subunit 6A | |
Comment | INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from AANU01219224.1 and AANU01219226.1. On Aug 11, 2010 this sequence version replaced XM_001110301.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SRS211172, SRS211173 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001181407.1 |
CDS | 14..535 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001194478.1 |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb12274 | |
Clone ID Related Accession (Same CDS sequence) | XM_002801293.2 | |
Accession Version | XM_002801293.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 480bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | trafficking protein particle complex subunit 6A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805800.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 21, 2015 this sequence version replaced XM_002801293.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002801339.1 |
CDS | 96..575 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002801293.2 |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb57662 | |
Clone ID Related Accession (Same CDS sequence) | NM_001194478.2 | |
Accession Version | NM_001194478.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 522bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-28 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | trafficking protein particle complex subunit 6A | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JSUE03021876.1. On Jun 30, 2017 this sequence version replaced NM_001194478.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN02690825 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001181407.1 |
CDS | 14..535 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001194478.2 |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb94863 | |
Clone ID Related Accession (Same CDS sequence) | NM_001194478.3 | |
Accession Version | NM_001194478.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 522bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-11 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | trafficking protein particle complex subunit 6A | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from QNVO02000225.1. On Dec 12, 2019 this sequence version replaced NM_001194478.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN02690825 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001181407.2 |
CDS | 14..535 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001194478.3 |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb53859 | |
Clone ID Related Accession (Same CDS sequence) | XM_015124121.1 | |
Accession Version | XM_015124121.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 384bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | trafficking protein particle complex subunit 6A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805800.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014979607.1 |
CDS | 4..387 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015124121.1 |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb75510 | |
Clone ID Related Accession (Same CDS sequence) | XM_002801293.3 | |
Accession Version | XM_002801293.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 480bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | trafficking protein particle complex subunit 6A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041772.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_002801293.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002801339.2 |
CDS | 67..546 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002801293.3 |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb75511 | |
Clone ID Related Accession (Same CDS sequence) | XM_015124121.2 | |
Accession Version | XM_015124121.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 384bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | trafficking protein particle complex subunit 6A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041772.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015124121.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014979607.2 |
CDS | 411..794 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015124121.2 |
1 | ATGGCGGACA CTGTGCTGTT CGAGTTTCTT CACACGGAGA TGGTGGCGGA GCTGTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |