Gene Symbol | SSR1 |
Entrez Gene ID | 693818 |
Full Name | signal sequence receptor subunit 1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » SSR1 cDNA ORF clone
Gene Symbol | SSR1 |
Entrez Gene ID | 693818 |
Full Name | signal sequence receptor subunit 1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_015135448.1 | XP_014990934.1 | translocon-associated protein subunit alpha isoform X3 |
NM_001258152.1 | NP_001245081.1 | translocon-associated protein subunit alpha precursor |
XM_015135446.1 | XP_014990932.1 | translocon-associated protein subunit alpha isoform X1 |
XM_015135447.1 | XP_014990933.1 | translocon-associated protein subunit alpha isoform X2 |
XM_015135448.2 | XP_014990934.1 | translocon-associated protein subunit alpha isoform X1 |
Canis lupus familiaris (dog) | SSR1 | NP_001003270.1 |
Bos taurus (cattle) | SSR1 | NP_001095592.1 |
Rattus norvegicus (Norway rat) | Ssr1 | NP_001008891.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001721 | XP_321364.3 |
Xenopus tropicalis (tropical clawed frog) | ssr1 | NP_001016912.1 |
Pan troglodytes (chimpanzee) | SSR1 | XP_003311142.1 |
Gallus gallus (chicken) | SSR1 | NP_001006375.1 |
Drosophila melanogaster (fruit fly) | l(1)G0320 | NP_572567.1 |
Caenorhabditis elegans (roundworm) | trap-1 | NP_491076.1 |
Danio rerio (zebrafish) | ssr1 | NP_958484.1 |
Homo sapiens (human) | SSR1 | NP_003135.2 |
SSR1 | XP_001083953.1 | |
Mus musculus (house mouse) | Ssr1 | NP_080241.3 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SSR1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SSR1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb01695 | |
Clone ID Related Accession (Same CDS sequence) | NM_001258152.1 | |
Accession Version | NM_001258152.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 861bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-27 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | translocon-associated protein subunit alpha precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JU476943.1. On or before Apr 19, 2012 this sequence version replaced XM_001083838.2, XM_001083953.2, XM_001083265.2, XM_002803599.1. ##Evidence-Data-START## Transcript exon combination :: JU476943.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688316 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001245081.1 |
CDS | 111..971 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31544 | |
Clone ID Related Accession (Same CDS sequence) | XM_015135446.1 | |
Accession Version | XM_015135446.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 897bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | translocon-associated protein subunit alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804779.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014990932.1 |
CDS | 194..1090 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31545 | |
Clone ID Related Accession (Same CDS sequence) | XM_015135447.1 | |
Accession Version | XM_015135447.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | translocon-associated protein subunit alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804779.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014990933.1 |
CDS | 194..1075 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31546 | |
Clone ID Related Accession (Same CDS sequence) | XM_015135448.1 , XM_015135448.2 | |
Accession Version | XM_015135448.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 876bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | translocon-associated protein subunit alpha isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804779.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014990934.1 |
CDS | 194..1069 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31546 | |
Clone ID Related Accession (Same CDS sequence) | XM_015135448.1 , XM_015135448.2 | |
Accession Version | XM_015135448.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 876bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | translocon-associated protein subunit alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015135448.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014990934.1 |
CDS | 194..1069 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGACTCC TCCCCCGCTT GCTGCTGCTT CTCTTGCTCG TGTTCCCTGC CACTGTCTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |