LOC4340956 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

The following LOC4340956 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4340956 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa14008 XM_015787219.2
Latest version!
Oryza sativa Japonica Group xyloglucan galactosyltransferase XLT2 (LOC4340956), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 10-12 $342.30
$489.00
OOa35355 XM_015787218.2
Latest version!
Oryza sativa Japonica Group xyloglucan galactosyltransferase XLT2 (LOC4340956), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
View Old Accession Versions >>
OOa35355 XM_015787218.1 Oryza sativa Japonica Group xyloglucan galactosyltransferase KATAMARI1 homolog (LOC4340956), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OOa14008 XM_015787219.1 Oryza sativa Japonica Group xyloglucan galactosyltransferase KATAMARI1 homolog (LOC4340956), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 10-12 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OOa14008
    Clone ID Related Accession (Same CDS sequence) XM_015787219.1 , XM_015787219.2
    Accession Version XM_015787219.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1671bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product xyloglucan galactosyltransferase KATAMARI1 homolog isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379179.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCCGGAGT CACCGACATC GCCACCCACC TCGCCGCTGC CGGGATCGCC CACCAATAAT 
    GCCACGCCGC CGTCCCCGGT GTCGGCGTTT CTGCGAGCCA CCGTGCTGTT CGCCGCCTTC
    CTAGCCCTCC AGCTCGTGCT CTTCAAGTCC CTCCTCACGT TCCCGAGCTC CCGGTTCCTG
    CCGGCGCCGC GCCGCAGCAA CAGCACCTGG GCCAACGGCG CCGTGGACGA CGCCGAGGAG
    TGCAAGGCCG GGCTCATCTA CGTCTACGAC CTCCCGCCGG AGTTCAACCA CGACCTCGTC
    GCCCACTGCG ACCGCCTGTG GCCGTGGTAC TCCTTCTGCC CCTACCTCTC CAATGGCGGC
    CTCGGCCGGC CCGCCGCCGA GGTACCGGCG CTCTCCGCCG TCGTGCCGAA CGCGTCGCTG
    CCCAACTGGT ACAACACCGA CCAGTTCCCG CTCGAGGTCA TCGTCCACCG CCGCCTTCTG
    TCCCACCGGT GCCGCACCAT CGACGCGTCG CTCGCCACCG CGTTCTACGT GCCGTTCTAC
    GCGGGCCTCG ACGTCGGCAG CCACCTGTGG GGCCCGAACA GCACCGTCGC CGACCGCGAC
    CGCGCCGGCG CGCGGCTCCT CCGGTGGCTC AGGGGGCAGC CGTTCTTCGC CAAGTCCGGC
    GGGTGGGACC ACTTCATCAC GCTCGGGCGC ATCACGTGGG ACTTCCGCCG GTACGGCGCC
    GACGGGTGGG GCACCAACCT GGTGCTCATG CCCGGGATGG AGAACGTCAC CCGCCTCGTC
    ATCGAGGGCG ACCGCCTCGA CCCGCTCGAC GTCGGCGTCC CTTACCCGAC GGGGTTCCAC
    CCGCGGCGCG CCGCCGACGT CCGCGCGTGG CAGGAGCACG TGCTGTCCCT GGACCGCCGC
    AACCTGTTCG GGTTCGCCGG CGCGCCGCGT TCCGGGTTCC CGGACGACTT CAGGGACGTG
    CTGCTGGAGG AGTGCGAGGA CGCCGGGAGC GACCGCTGCC GCGCCGTGGA CTGCCGGGGC
    ACGCGGTGCA ACGACGACGG CGCGGCGGTG ATGAGGCTGT TCATGGGGTC CCGCTTCTGC
    CTGCAGCCGC GCGGGGACAG CTTCACGCGG CGGTCCCTGT TCGACTGCAT GGTGGCCGGC
    GCCGTGCCGG TGCTGTTCTG GCGGAGGACG GCGTACGACG CGTACCGGTG GTTCCTGCCG
    CGCGGCGAGG AGGGGGAGTG GTCGGTGTTC ATCGACCGGC GGGCGCTGCG GGTGGGCAAC
    GTGAGCGTGC GGGACGTGCT GGAAGGGTAC AGCGAGCGGC GGGTGCGGCG GATGCGGGAG
    CGCGTGGTGG AGATGATACC CAGGCTGGTG TACGGCTCGT CGCCCGACGG CCTCGGCGAC
    GGCATGGACG ACGCGCTTGA CGTCGCTCTC GGCGGCGTCC TCAAGCGGTT CCGCCACCGC
    CGGTGGAGCA TTGGGCATGA AGAGCGCCCG CCTGGGCGTT TGGTCGCTGG GGCACCACCA
    CGGCGTGGCA GCAGCAAAAC GACGACGCCT CCAACTTCTA ACGGGAGAAA CGGATCGGTG
    ATTGGGCAGC GTGCGTCGCG GCACAGATCA ACGGCGGCGT CCTCGGCGTA CATAAAAACC
    GTCCTATCGG AAGCACCGGC ATCAAGAAGC AAAAGCTTGC AGCAATCTTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015642705.1
    CDS143..1813
    Translation

    Target ORF information:

    RefSeq Version XM_015787219.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group xyloglucan galactosyltransferase KATAMARI1 homolog (LOC4340956), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015787219.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCCGGAGT CACCGACATC GCCACCCACC TCGCCGCTGC CGGGATCGCC CACCAATAAT 
    GCCACGCCGC CGTCCCCGGT GTCGGCGTTT CTGCGAGCCA CCGTGCTGTT CGCCGCCTTC
    CTAGCCCTCC AGCTCGTGCT CTTCAAGTCC CTCCTCACGT TCCCGAGCTC CCGGTTCCTG
    CCGGCGCCGC GCCGCAGCAA CAGCACCTGG GCCAACGGCG CCGTGGACGA CGCCGAGGAG
    TGCAAGGCCG GGCTCATCTA CGTCTACGAC CTCCCGCCGG AGTTCAACCA CGACCTCGTC
    GCCCACTGCG ACCGCCTGTG GCCGTGGTAC TCCTTCTGCC CCTACCTCTC CAATGGCGGC
    CTCGGCCGGC CCGCCGCCGA GGTACCGGCG CTCTCCGCCG TCGTGCCGAA CGCGTCGCTG
    CCCAACTGGT ACAACACCGA CCAGTTCCCG CTCGAGGTCA TCGTCCACCG CCGCCTTCTG
    TCCCACCGGT GCCGCACCAT CGACGCGTCG CTCGCCACCG CGTTCTACGT GCCGTTCTAC
    GCGGGCCTCG ACGTCGGCAG CCACCTGTGG GGCCCGAACA GCACCGTCGC CGACCGCGAC
    CGCGCCGGCG CGCGGCTCCT CCGGTGGCTC AGGGGGCAGC CGTTCTTCGC CAAGTCCGGC
    GGGTGGGACC ACTTCATCAC GCTCGGGCGC ATCACGTGGG ACTTCCGCCG GTACGGCGCC
    GACGGGTGGG GCACCAACCT GGTGCTCATG CCCGGGATGG AGAACGTCAC CCGCCTCGTC
    ATCGAGGGCG ACCGCCTCGA CCCGCTCGAC GTCGGCGTCC CTTACCCGAC GGGGTTCCAC
    CCGCGGCGCG CCGCCGACGT CCGCGCGTGG CAGGAGCACG TGCTGTCCCT GGACCGCCGC
    AACCTGTTCG GGTTCGCCGG CGCGCCGCGT TCCGGGTTCC CGGACGACTT CAGGGACGTG
    CTGCTGGAGG AGTGCGAGGA CGCCGGGAGC GACCGCTGCC GCGCCGTGGA CTGCCGGGGC
    ACGCGGTGCA ACGACGACGG CGCGGCGGTG ATGAGGCTGT TCATGGGGTC CCGCTTCTGC
    CTGCAGCCGC GCGGGGACAG CTTCACGCGG CGGTCCCTGT TCGACTGCAT GGTGGCCGGC
    GCCGTGCCGG TGCTGTTCTG GCGGAGGACG GCGTACGACG CGTACCGGTG GTTCCTGCCG
    CGCGGCGAGG AGGGGGAGTG GTCGGTGTTC ATCGACCGGC GGGCGCTGCG GGTGGGCAAC
    GTGAGCGTGC GGGACGTGCT GGAAGGGTAC AGCGAGCGGC GGGTGCGGCG GATGCGGGAG
    CGCGTGGTGG AGATGATACC CAGGCTGGTG TACGGCTCGT CGCCCGACGG CCTCGGCGAC
    GGCATGGACG ACGCGCTTGA CGTCGCTCTC GGCGGCGTCC TCAAGCGGTT CCGCCACCGC
    CGGTGGAGCA TTGGGCATGA AGAGCGCCCG CCTGGGCGTT TGGTCGCTGG GGCACCACCA
    CGGCGTGGCA GCAGCAAAAC GACGACGCCT CCAACTTCTA ACGGGAGAAA CGGATCGGTG
    ATTGGGCAGC GTGCGTCGCG GCACAGATCA ACGGCGGCGT CCTCGGCGTA CATAAAAACC
    GTCCTATCGG AAGCACCGGC ATCAAGAAGC AAAAGCTTGC AGCAATCTTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OOa14008
    Clone ID Related Accession (Same CDS sequence) XM_015787219.1 , XM_015787219.2
    Accession Version XM_015787219.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1671bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product xyloglucan galactosyltransferase XLT2 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029261.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015787219.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCCGGAGT CACCGACATC GCCACCCACC TCGCCGCTGC CGGGATCGCC CACCAATAAT 
    GCCACGCCGC CGTCCCCGGT GTCGGCGTTT CTGCGAGCCA CCGTGCTGTT CGCCGCCTTC
    CTAGCCCTCC AGCTCGTGCT CTTCAAGTCC CTCCTCACGT TCCCGAGCTC CCGGTTCCTG
    CCGGCGCCGC GCCGCAGCAA CAGCACCTGG GCCAACGGCG CCGTGGACGA CGCCGAGGAG
    TGCAAGGCCG GGCTCATCTA CGTCTACGAC CTCCCGCCGG AGTTCAACCA CGACCTCGTC
    GCCCACTGCG ACCGCCTGTG GCCGTGGTAC TCCTTCTGCC CCTACCTCTC CAATGGCGGC
    CTCGGCCGGC CCGCCGCCGA GGTACCGGCG CTCTCCGCCG TCGTGCCGAA CGCGTCGCTG
    CCCAACTGGT ACAACACCGA CCAGTTCCCG CTCGAGGTCA TCGTCCACCG CCGCCTTCTG
    TCCCACCGGT GCCGCACCAT CGACGCGTCG CTCGCCACCG CGTTCTACGT GCCGTTCTAC
    GCGGGCCTCG ACGTCGGCAG CCACCTGTGG GGCCCGAACA GCACCGTCGC CGACCGCGAC
    CGCGCCGGCG CGCGGCTCCT CCGGTGGCTC AGGGGGCAGC CGTTCTTCGC CAAGTCCGGC
    GGGTGGGACC ACTTCATCAC GCTCGGGCGC ATCACGTGGG ACTTCCGCCG GTACGGCGCC
    GACGGGTGGG GCACCAACCT GGTGCTCATG CCCGGGATGG AGAACGTCAC CCGCCTCGTC
    ATCGAGGGCG ACCGCCTCGA CCCGCTCGAC GTCGGCGTCC CTTACCCGAC GGGGTTCCAC
    CCGCGGCGCG CCGCCGACGT CCGCGCGTGG CAGGAGCACG TGCTGTCCCT GGACCGCCGC
    AACCTGTTCG GGTTCGCCGG CGCGCCGCGT TCCGGGTTCC CGGACGACTT CAGGGACGTG
    CTGCTGGAGG AGTGCGAGGA CGCCGGGAGC GACCGCTGCC GCGCCGTGGA CTGCCGGGGC
    ACGCGGTGCA ACGACGACGG CGCGGCGGTG ATGAGGCTGT TCATGGGGTC CCGCTTCTGC
    CTGCAGCCGC GCGGGGACAG CTTCACGCGG CGGTCCCTGT TCGACTGCAT GGTGGCCGGC
    GCCGTGCCGG TGCTGTTCTG GCGGAGGACG GCGTACGACG CGTACCGGTG GTTCCTGCCG
    CGCGGCGAGG AGGGGGAGTG GTCGGTGTTC ATCGACCGGC GGGCGCTGCG GGTGGGCAAC
    GTGAGCGTGC GGGACGTGCT GGAAGGGTAC AGCGAGCGGC GGGTGCGGCG GATGCGGGAG
    CGCGTGGTGG AGATGATACC CAGGCTGGTG TACGGCTCGT CGCCCGACGG CCTCGGCGAC
    GGCATGGACG ACGCGCTTGA CGTCGCTCTC GGCGGCGTCC TCAAGCGGTT CCGCCACCGC
    CGGTGGAGCA TTGGGCATGA AGAGCGCCCG CCTGGGCGTT TGGTCGCTGG GGCACCACCA
    CGGCGTGGCA GCAGCAAAAC GACGACGCCT CCAACTTCTA ACGGGAGAAA CGGATCGGTG
    ATTGGGCAGC GTGCGTCGCG GCACAGATCA ACGGCGGCGT CCTCGGCGTA CATAAAAACC
    GTCCTATCGG AAGCACCGGC ATCAAGAAGC AAAAGCTTGC AGCAATCTTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015642705.1
    CDS284..1954
    Translation

    Target ORF information:

    RefSeq Version XM_015787219.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group xyloglucan galactosyltransferase XLT2 (LOC4340956), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015787219.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCCGGAGT CACCGACATC GCCACCCACC TCGCCGCTGC CGGGATCGCC CACCAATAAT 
    GCCACGCCGC CGTCCCCGGT GTCGGCGTTT CTGCGAGCCA CCGTGCTGTT CGCCGCCTTC
    CTAGCCCTCC AGCTCGTGCT CTTCAAGTCC CTCCTCACGT TCCCGAGCTC CCGGTTCCTG
    CCGGCGCCGC GCCGCAGCAA CAGCACCTGG GCCAACGGCG CCGTGGACGA CGCCGAGGAG
    TGCAAGGCCG GGCTCATCTA CGTCTACGAC CTCCCGCCGG AGTTCAACCA CGACCTCGTC
    GCCCACTGCG ACCGCCTGTG GCCGTGGTAC TCCTTCTGCC CCTACCTCTC CAATGGCGGC
    CTCGGCCGGC CCGCCGCCGA GGTACCGGCG CTCTCCGCCG TCGTGCCGAA CGCGTCGCTG
    CCCAACTGGT ACAACACCGA CCAGTTCCCG CTCGAGGTCA TCGTCCACCG CCGCCTTCTG
    TCCCACCGGT GCCGCACCAT CGACGCGTCG CTCGCCACCG CGTTCTACGT GCCGTTCTAC
    GCGGGCCTCG ACGTCGGCAG CCACCTGTGG GGCCCGAACA GCACCGTCGC CGACCGCGAC
    CGCGCCGGCG CGCGGCTCCT CCGGTGGCTC AGGGGGCAGC CGTTCTTCGC CAAGTCCGGC
    GGGTGGGACC ACTTCATCAC GCTCGGGCGC ATCACGTGGG ACTTCCGCCG GTACGGCGCC
    GACGGGTGGG GCACCAACCT GGTGCTCATG CCCGGGATGG AGAACGTCAC CCGCCTCGTC
    ATCGAGGGCG ACCGCCTCGA CCCGCTCGAC GTCGGCGTCC CTTACCCGAC GGGGTTCCAC
    CCGCGGCGCG CCGCCGACGT CCGCGCGTGG CAGGAGCACG TGCTGTCCCT GGACCGCCGC
    AACCTGTTCG GGTTCGCCGG CGCGCCGCGT TCCGGGTTCC CGGACGACTT CAGGGACGTG
    CTGCTGGAGG AGTGCGAGGA CGCCGGGAGC GACCGCTGCC GCGCCGTGGA CTGCCGGGGC
    ACGCGGTGCA ACGACGACGG CGCGGCGGTG ATGAGGCTGT TCATGGGGTC CCGCTTCTGC
    CTGCAGCCGC GCGGGGACAG CTTCACGCGG CGGTCCCTGT TCGACTGCAT GGTGGCCGGC
    GCCGTGCCGG TGCTGTTCTG GCGGAGGACG GCGTACGACG CGTACCGGTG GTTCCTGCCG
    CGCGGCGAGG AGGGGGAGTG GTCGGTGTTC ATCGACCGGC GGGCGCTGCG GGTGGGCAAC
    GTGAGCGTGC GGGACGTGCT GGAAGGGTAC AGCGAGCGGC GGGTGCGGCG GATGCGGGAG
    CGCGTGGTGG AGATGATACC CAGGCTGGTG TACGGCTCGT CGCCCGACGG CCTCGGCGAC
    GGCATGGACG ACGCGCTTGA CGTCGCTCTC GGCGGCGTCC TCAAGCGGTT CCGCCACCGC
    CGGTGGAGCA TTGGGCATGA AGAGCGCCCG CCTGGGCGTT TGGTCGCTGG GGCACCACCA
    CGGCGTGGCA GCAGCAAAAC GACGACGCCT CCAACTTCTA ACGGGAGAAA CGGATCGGTG
    ATTGGGCAGC GTGCGTCGCG GCACAGATCA ACGGCGGCGT CCTCGGCGTA CATAAAAACC
    GTCCTATCGG AAGCACCGGC ATCAAGAAGC AAAAGCTTGC AGCAATCTTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OOa35355
    Clone ID Related Accession (Same CDS sequence) XM_015787218.2 , XM_015787218.1
    Accession Version XM_015787218.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1674bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product xyloglucan galactosyltransferase XLT2 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029261.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015787218.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCCGGAGT CACCGACATC GCCACCCACC TCGCCGCTGC CGGGATCGCC CACCAATAAT 
    GCCACGCCGC CGTCCCCGGT GTCGGCGTTT CTGCGAGCCA CCGTGCTGTT CGCCGCCTTC
    CTAGCCCTCC AGCTCGTGCT CTTCAAGTCC CTCCTCACGT TCCCGAGCTC CCGGTTCCTG
    CCGGCGCCGC GCCGCAGCAA CAGCACCTGG GCCAACGGCG CCGTGGACGA CGCCGAGGAG
    TGCAAGGCCG GGCTCATCTA CGTCTACGAC CTCCCGCCGG AGTTCAACCA CGACCTCGTC
    GCCCACTGCG ACCGCCTGTG GCCGTGGTAC TCCTTCTGCC CCTACCTCTC CAATGGCGGC
    CTCGGCCGGC CCGCCGCCGA GGTACCGGCG CTCTCCGCCG TCGTGCCGAA CGCGTCGCTG
    CCCAACTGGT ACAACACCGA CCAGTTCCCG CTCGAGGTCA TCGTCCACCG CCGCCTTCTG
    TCCCACCGGT GCCGCACCAT CGACGCGTCG CTCGCCACCG CGTTCTACGT GCCGTTCTAC
    GCGGGCCTCG ACGTCGGCAG CCACCTGTGG GGCCCGAACA GCACCGTCGC CGACCGCGAC
    CGCGCCGGCG CGCGGCTCCT CCGGTGGCTC AGGGGGCAGC CGTTCTTCGC CAAGTCCGGC
    GGGTGGGACC ACTTCATCAC GCTCGGGCGC ATCACGTGGG ACTTCCGCCG GTACGGCGCC
    GACGGGTGGG GCACCAACCT GGTGCTCATG CCCGGGATGG AGAACGTCAC CCGCCTCGTC
    ATCGAGGGCG ACCGCCTCGA CCCGCTCGAC GTCGGCGTCC CTTACCCGAC GGGGTTCCAC
    CCGCGGCGCG CCGCCGACGT CCGCGCGTGG CAGGAGCACG TGCTGTCCCT GGACCGCCGC
    AACCTGTTCG GGTTCGCCGG CGCGCCGCGT TCCGGGTTCC CGGACGACTT CAGGGACGTG
    CTGCTGGAGG AGTGCGAGGA CGCCGGGAGC GACCGCTGCC GCGCCGTGGA CTGCCGGGGC
    ACGCGGTGCA ACGACGACGG CGCGGCGGTG ATGAGGCTGT TCATGGGGTC CCGCTTCTGC
    CTGCAGCCGC GCGGGGACAG CTTCACGCGG CGGTCCCTGT TCGACTGCAT GGTGGCCGGC
    GCCGTGCCGG TGCTGTTCTG GCGGAGGACG GCGTACGACG CGTACCGGTG GTTCCTGCCG
    CGCGGCGAGG AGGGGGAGTG GTCGGTGTTC ATCGACCGGC GGGCGCTGCG GGTGGGCAAC
    GTGAGCGTGC GGGACGTGCT GGAAGGGTAC AGCGAGCGGC GGGTGCGGCG GATGCGGGAG
    CGCGTGGTGG AGATGATACC CAGGCTGGTG TACGGCTCGT CGCCCGACGG CCTCGGCGAC
    GGCATGGACG ACGCGCTTGA CGTCGCTCTC GGCGGCGTCC TCAAGCGGTT CCGCCACCGC
    CGGTGGAGCA TTGGGCATGA AGCAGAGCGC CCGCCTGGGC GTTTGGTCGC TGGGGCACCA
    CCACGGCGTG GCAGCAGCAA AACGACGACG CCTCCAACTT CTAACGGGAG AAACGGATCG
    GTGATTGGGC AGCGTGCGTC GCGGCACAGA TCAACGGCGG CGTCCTCGGC GTACATAAAA
    ACCGTCCTAT CGGAAGCACC GGCATCAAGA AGCAAAAGCT TGCAGCAATC TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015642704.1
    CDS283..1956
    Translation

    Target ORF information:

    RefSeq Version XM_015787218.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group xyloglucan galactosyltransferase XLT2 (LOC4340956), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015787218.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCCGGAGT CACCGACATC GCCACCCACC TCGCCGCTGC CGGGATCGCC CACCAATAAT 
    GCCACGCCGC CGTCCCCGGT GTCGGCGTTT CTGCGAGCCA CCGTGCTGTT CGCCGCCTTC
    CTAGCCCTCC AGCTCGTGCT CTTCAAGTCC CTCCTCACGT TCCCGAGCTC CCGGTTCCTG
    CCGGCGCCGC GCCGCAGCAA CAGCACCTGG GCCAACGGCG CCGTGGACGA CGCCGAGGAG
    TGCAAGGCCG GGCTCATCTA CGTCTACGAC CTCCCGCCGG AGTTCAACCA CGACCTCGTC
    GCCCACTGCG ACCGCCTGTG GCCGTGGTAC TCCTTCTGCC CCTACCTCTC CAATGGCGGC
    CTCGGCCGGC CCGCCGCCGA GGTACCGGCG CTCTCCGCCG TCGTGCCGAA CGCGTCGCTG
    CCCAACTGGT ACAACACCGA CCAGTTCCCG CTCGAGGTCA TCGTCCACCG CCGCCTTCTG
    TCCCACCGGT GCCGCACCAT CGACGCGTCG CTCGCCACCG CGTTCTACGT GCCGTTCTAC
    GCGGGCCTCG ACGTCGGCAG CCACCTGTGG GGCCCGAACA GCACCGTCGC CGACCGCGAC
    CGCGCCGGCG CGCGGCTCCT CCGGTGGCTC AGGGGGCAGC CGTTCTTCGC CAAGTCCGGC
    GGGTGGGACC ACTTCATCAC GCTCGGGCGC ATCACGTGGG ACTTCCGCCG GTACGGCGCC
    GACGGGTGGG GCACCAACCT GGTGCTCATG CCCGGGATGG AGAACGTCAC CCGCCTCGTC
    ATCGAGGGCG ACCGCCTCGA CCCGCTCGAC GTCGGCGTCC CTTACCCGAC GGGGTTCCAC
    CCGCGGCGCG CCGCCGACGT CCGCGCGTGG CAGGAGCACG TGCTGTCCCT GGACCGCCGC
    AACCTGTTCG GGTTCGCCGG CGCGCCGCGT TCCGGGTTCC CGGACGACTT CAGGGACGTG
    CTGCTGGAGG AGTGCGAGGA CGCCGGGAGC GACCGCTGCC GCGCCGTGGA CTGCCGGGGC
    ACGCGGTGCA ACGACGACGG CGCGGCGGTG ATGAGGCTGT TCATGGGGTC CCGCTTCTGC
    CTGCAGCCGC GCGGGGACAG CTTCACGCGG CGGTCCCTGT TCGACTGCAT GGTGGCCGGC
    GCCGTGCCGG TGCTGTTCTG GCGGAGGACG GCGTACGACG CGTACCGGTG GTTCCTGCCG
    CGCGGCGAGG AGGGGGAGTG GTCGGTGTTC ATCGACCGGC GGGCGCTGCG GGTGGGCAAC
    GTGAGCGTGC GGGACGTGCT GGAAGGGTAC AGCGAGCGGC GGGTGCGGCG GATGCGGGAG
    CGCGTGGTGG AGATGATACC CAGGCTGGTG TACGGCTCGT CGCCCGACGG CCTCGGCGAC
    GGCATGGACG ACGCGCTTGA CGTCGCTCTC GGCGGCGTCC TCAAGCGGTT CCGCCACCGC
    CGGTGGAGCA TTGGGCATGA AGCAGAGCGC CCGCCTGGGC GTTTGGTCGC TGGGGCACCA
    CCACGGCGTG GCAGCAGCAA AACGACGACG CCTCCAACTT CTAACGGGAG AAACGGATCG
    GTGATTGGGC AGCGTGCGTC GCGGCACAGA TCAACGGCGG CGTCCTCGGC GTACATAAAA
    ACCGTCCTAT CGGAAGCACC GGCATCAAGA AGCAAAAGCT TGCAGCAATC TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OOa35355
    Clone ID Related Accession (Same CDS sequence) XM_015787218.2 , XM_015787218.1
    Accession Version XM_015787218.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1674bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product xyloglucan galactosyltransferase KATAMARI1 homolog isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379179.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCCGGAGT CACCGACATC GCCACCCACC TCGCCGCTGC CGGGATCGCC CACCAATAAT 
    GCCACGCCGC CGTCCCCGGT GTCGGCGTTT CTGCGAGCCA CCGTGCTGTT CGCCGCCTTC
    CTAGCCCTCC AGCTCGTGCT CTTCAAGTCC CTCCTCACGT TCCCGAGCTC CCGGTTCCTG
    CCGGCGCCGC GCCGCAGCAA CAGCACCTGG GCCAACGGCG CCGTGGACGA CGCCGAGGAG
    TGCAAGGCCG GGCTCATCTA CGTCTACGAC CTCCCGCCGG AGTTCAACCA CGACCTCGTC
    GCCCACTGCG ACCGCCTGTG GCCGTGGTAC TCCTTCTGCC CCTACCTCTC CAATGGCGGC
    CTCGGCCGGC CCGCCGCCGA GGTACCGGCG CTCTCCGCCG TCGTGCCGAA CGCGTCGCTG
    CCCAACTGGT ACAACACCGA CCAGTTCCCG CTCGAGGTCA TCGTCCACCG CCGCCTTCTG
    TCCCACCGGT GCCGCACCAT CGACGCGTCG CTCGCCACCG CGTTCTACGT GCCGTTCTAC
    GCGGGCCTCG ACGTCGGCAG CCACCTGTGG GGCCCGAACA GCACCGTCGC CGACCGCGAC
    CGCGCCGGCG CGCGGCTCCT CCGGTGGCTC AGGGGGCAGC CGTTCTTCGC CAAGTCCGGC
    GGGTGGGACC ACTTCATCAC GCTCGGGCGC ATCACGTGGG ACTTCCGCCG GTACGGCGCC
    GACGGGTGGG GCACCAACCT GGTGCTCATG CCCGGGATGG AGAACGTCAC CCGCCTCGTC
    ATCGAGGGCG ACCGCCTCGA CCCGCTCGAC GTCGGCGTCC CTTACCCGAC GGGGTTCCAC
    CCGCGGCGCG CCGCCGACGT CCGCGCGTGG CAGGAGCACG TGCTGTCCCT GGACCGCCGC
    AACCTGTTCG GGTTCGCCGG CGCGCCGCGT TCCGGGTTCC CGGACGACTT CAGGGACGTG
    CTGCTGGAGG AGTGCGAGGA CGCCGGGAGC GACCGCTGCC GCGCCGTGGA CTGCCGGGGC
    ACGCGGTGCA ACGACGACGG CGCGGCGGTG ATGAGGCTGT TCATGGGGTC CCGCTTCTGC
    CTGCAGCCGC GCGGGGACAG CTTCACGCGG CGGTCCCTGT TCGACTGCAT GGTGGCCGGC
    GCCGTGCCGG TGCTGTTCTG GCGGAGGACG GCGTACGACG CGTACCGGTG GTTCCTGCCG
    CGCGGCGAGG AGGGGGAGTG GTCGGTGTTC ATCGACCGGC GGGCGCTGCG GGTGGGCAAC
    GTGAGCGTGC GGGACGTGCT GGAAGGGTAC AGCGAGCGGC GGGTGCGGCG GATGCGGGAG
    CGCGTGGTGG AGATGATACC CAGGCTGGTG TACGGCTCGT CGCCCGACGG CCTCGGCGAC
    GGCATGGACG ACGCGCTTGA CGTCGCTCTC GGCGGCGTCC TCAAGCGGTT CCGCCACCGC
    CGGTGGAGCA TTGGGCATGA AGCAGAGCGC CCGCCTGGGC GTTTGGTCGC TGGGGCACCA
    CCACGGCGTG GCAGCAGCAA AACGACGACG CCTCCAACTT CTAACGGGAG AAACGGATCG
    GTGATTGGGC AGCGTGCGTC GCGGCACAGA TCAACGGCGG CGTCCTCGGC GTACATAAAA
    ACCGTCCTAT CGGAAGCACC GGCATCAAGA AGCAAAAGCT TGCAGCAATC TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015642704.1
    CDS37..1710
    Translation

    Target ORF information:

    RefSeq Version XM_015787218.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group xyloglucan galactosyltransferase KATAMARI1 homolog (LOC4340956), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015787218.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCCGGAGT CACCGACATC GCCACCCACC TCGCCGCTGC CGGGATCGCC CACCAATAAT 
    GCCACGCCGC CGTCCCCGGT GTCGGCGTTT CTGCGAGCCA CCGTGCTGTT CGCCGCCTTC
    CTAGCCCTCC AGCTCGTGCT CTTCAAGTCC CTCCTCACGT TCCCGAGCTC CCGGTTCCTG
    CCGGCGCCGC GCCGCAGCAA CAGCACCTGG GCCAACGGCG CCGTGGACGA CGCCGAGGAG
    TGCAAGGCCG GGCTCATCTA CGTCTACGAC CTCCCGCCGG AGTTCAACCA CGACCTCGTC
    GCCCACTGCG ACCGCCTGTG GCCGTGGTAC TCCTTCTGCC CCTACCTCTC CAATGGCGGC
    CTCGGCCGGC CCGCCGCCGA GGTACCGGCG CTCTCCGCCG TCGTGCCGAA CGCGTCGCTG
    CCCAACTGGT ACAACACCGA CCAGTTCCCG CTCGAGGTCA TCGTCCACCG CCGCCTTCTG
    TCCCACCGGT GCCGCACCAT CGACGCGTCG CTCGCCACCG CGTTCTACGT GCCGTTCTAC
    GCGGGCCTCG ACGTCGGCAG CCACCTGTGG GGCCCGAACA GCACCGTCGC CGACCGCGAC
    CGCGCCGGCG CGCGGCTCCT CCGGTGGCTC AGGGGGCAGC CGTTCTTCGC CAAGTCCGGC
    GGGTGGGACC ACTTCATCAC GCTCGGGCGC ATCACGTGGG ACTTCCGCCG GTACGGCGCC
    GACGGGTGGG GCACCAACCT GGTGCTCATG CCCGGGATGG AGAACGTCAC CCGCCTCGTC
    ATCGAGGGCG ACCGCCTCGA CCCGCTCGAC GTCGGCGTCC CTTACCCGAC GGGGTTCCAC
    CCGCGGCGCG CCGCCGACGT CCGCGCGTGG CAGGAGCACG TGCTGTCCCT GGACCGCCGC
    AACCTGTTCG GGTTCGCCGG CGCGCCGCGT TCCGGGTTCC CGGACGACTT CAGGGACGTG
    CTGCTGGAGG AGTGCGAGGA CGCCGGGAGC GACCGCTGCC GCGCCGTGGA CTGCCGGGGC
    ACGCGGTGCA ACGACGACGG CGCGGCGGTG ATGAGGCTGT TCATGGGGTC CCGCTTCTGC
    CTGCAGCCGC GCGGGGACAG CTTCACGCGG CGGTCCCTGT TCGACTGCAT GGTGGCCGGC
    GCCGTGCCGG TGCTGTTCTG GCGGAGGACG GCGTACGACG CGTACCGGTG GTTCCTGCCG
    CGCGGCGAGG AGGGGGAGTG GTCGGTGTTC ATCGACCGGC GGGCGCTGCG GGTGGGCAAC
    GTGAGCGTGC GGGACGTGCT GGAAGGGTAC AGCGAGCGGC GGGTGCGGCG GATGCGGGAG
    CGCGTGGTGG AGATGATACC CAGGCTGGTG TACGGCTCGT CGCCCGACGG CCTCGGCGAC
    GGCATGGACG ACGCGCTTGA CGTCGCTCTC GGCGGCGTCC TCAAGCGGTT CCGCCACCGC
    CGGTGGAGCA TTGGGCATGA AGCAGAGCGC CCGCCTGGGC GTTTGGTCGC TGGGGCACCA
    CCACGGCGTG GCAGCAGCAA AACGACGACG CCTCCAACTT CTAACGGGAG AAACGGATCG
    GTGATTGGGC AGCGTGCGTC GCGGCACAGA TCAACGGCGG CGTCCTCGGC GTACATAAAA
    ACCGTCCTAT CGGAAGCACC GGCATCAAGA AGCAAAAGCT TGCAGCAATC TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.