Gene Symbol | LOC4342862 |
Entrez Gene ID | 4342862 |
Full Name | metal transporter Nramp1 |
Synonyms | Nramp1,OJ1354_H07.109,OsJ_23752,OsNramp1 |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
ORF » Species Summary » Oryza sativa Japonica Group » LOC4342862 cDNA ORF clone
Gene Symbol | LOC4342862 |
Entrez Gene ID | 4342862 |
Full Name | metal transporter Nramp1 |
Synonyms | Nramp1,OJ1354_H07.109,OsJ_23752,OsNramp1 |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
mRNA | Protein | Name |
---|---|---|
XM_015792140.2 | XP_015647626.1 | metal transporter Nramp1 isoform X1 |
XM_015792140.1 | XP_015647626.1 | metal transporter Nramp1 isoform X1 |
XM_015792141.1 | XP_015647627.1 | metal transporter Nramp1 isoform X2 |
XM_015792142.1 | XP_015647628.1 | metal transporter Nramp1 isoform X3 |
XM_015792143.1 | XP_015647629.1 | metal transporter Nramp1 isoform X4 |
XM_015792141.2 | XP_015647627.1 | metal transporter Nramp1 isoform X2 |
XM_015792142.2 | XP_015647628.1 | metal transporter Nramp1 isoform X3 |
XM_015792143.2 | XP_015647629.1 | metal transporter Nramp1 isoform X4 |
Oryza sativa (rice) | Os02g0131800 | NP_001045794.1 |
Saccharomyces cerevisiae (baker's yeast) | SMF3 | NP_013134.1 |
Eremothecium gossypii | AGOS_AFR224C | NP_985771.1 |
Arabidopsis thaliana (thale cress) | NRAMP1 | NP_178198.1 |
Kluyveromyces lactis | KLLA0F17391g | XP_455861.1 |
Arabidopsis thaliana (thale cress) | NRAMP6 | NP_173048.3 |
Oryza sativa (rice) | Os07g0257200 | NP_001059312.1 |
Oryza sativa (rice) | Os07g0258400 | NP_001059315.1 |
The following LOC4342862 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4342862 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OOa15687 | |
Clone ID Related Accession (Same CDS sequence) | XM_015792143.1 , XM_015792143.2 | |
Accession Version | XM_015792143.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1557bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | metal transporter Nramp1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379180.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGTGA CGAAGGCGGA GGCGGTTGCC GGCGACGGCG GGAAGGTGGT GGACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015647629.1 |
CDS | 85..1641 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015792143.1 |
1 | ATGGGGGTGA CGAAGGCGGA GGCGGTTGCC GGCGACGGCG GGAAGGTGGT GGACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa15687 | |
Clone ID Related Accession (Same CDS sequence) | XM_015792143.1 , XM_015792143.2 | |
Accession Version | XM_015792143.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1557bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | metal transporter Nramp1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029262.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015792143.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGTGA CGAAGGCGGA GGCGGTTGCC GGCGACGGCG GGAAGGTGGT GGACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015647629.1 |
CDS | 109..1665 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015792143.2 |
1 | ATGGGGGTGA CGAAGGCGGA GGCGGTTGCC GGCGACGGCG GGAAGGTGGT GGACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa37524 | |
Clone ID Related Accession (Same CDS sequence) | XM_015792140.2 , XM_015792140.1 | |
Accession Version | XM_015792140.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1803bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | metal transporter Nramp1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029262.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015792140.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGTGA CGAAGGCGGA GGCGGTTGCC GGCGACGGCG GGAAGGTGGT GGACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015647626.1 |
CDS | 111..1913 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015792140.2 |
1 | ATGGGGGTGA CGAAGGCGGA GGCGGTTGCC GGCGACGGCG GGAAGGTGGT GGACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa37524 | |
Clone ID Related Accession (Same CDS sequence) | XM_015792140.2 , XM_015792140.1 | |
Accession Version | XM_015792140.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1803bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | metal transporter Nramp1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379180.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGTGA CGAAGGCGGA GGCGGTTGCC GGCGACGGCG GGAAGGTGGT GGACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015647626.1 |
CDS | 97..1899 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015792140.1 |
1 | ATGGGGGTGA CGAAGGCGGA GGCGGTTGCC GGCGACGGCG GGAAGGTGGT GGACGACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa37525 | |
Clone ID Related Accession (Same CDS sequence) | XM_015792141.1 , XM_015792141.2 | |
Accession Version | XM_015792141.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1680bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | metal transporter Nramp1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379180.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAAAGG TTTTTGTCCC ACATTGGACC AGGCTTTATG TGGAGACTGA TCTACAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015647627.1 |
CDS | 188..1867 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015792141.1 |
1 | ATGGAAAAGG TTTTTGTCCC ACATTGGACC AGGCTTTATG TGGAGACTGA TCTACAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa37525 | |
Clone ID Related Accession (Same CDS sequence) | XM_015792141.1 , XM_015792141.2 | |
Accession Version | XM_015792141.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1680bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | metal transporter Nramp1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029262.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015792141.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAAAGG TTTTTGTCCC ACATTGGACC AGGCTTTATG TGGAGACTGA TCTACAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015647627.1 |
CDS | 188..1867 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015792141.2 |
1 | ATGGAAAAGG TTTTTGTCCC ACATTGGACC AGGCTTTATG TGGAGACTGA TCTACAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa37526 | |
Clone ID Related Accession (Same CDS sequence) | XM_015792142.1 , XM_015792142.2 | |
Accession Version | XM_015792142.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | metal transporter Nramp1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379180.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCTGTT TGGCTTACCT CGATCCTGGA AATATGGAGA CTGATCTACA AGCTGGTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015647628.1 |
CDS | 218..1891 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015792142.1 |
1 | ATGGTCTGTT TGGCTTACCT CGATCCTGGA AATATGGAGA CTGATCTACA AGCTGGTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa37526 | |
Clone ID Related Accession (Same CDS sequence) | XM_015792142.1 , XM_015792142.2 | |
Accession Version | XM_015792142.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1674bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | metal transporter Nramp1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029262.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015792142.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCTGTT TGGCTTACCT CGATCCTGGA AATATGGAGA CTGATCTACA AGCTGGTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015647628.1 |
CDS | 246..1919 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015792142.2 |
1 | ATGGTCTGTT TGGCTTACCT CGATCCTGGA AATATGGAGA CTGATCTACA AGCTGGTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.