ORF » Species Summary » Oryza sativa Japonica Group » LOC4335526 cDNA ORF clone

LOC4335526 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

The following LOC4335526 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4335526 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa31640 XM_015779021.2
Latest version!		 Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OOa31641 XM_015779022.1
Latest version!		 Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OOa46709 XM_026024545.1
Latest version!		 Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OOa31640 XM_015779021.1 Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC4335526 ( XM_015779021.2 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015634507.1 Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OOa31640
    Clone ID Related Accession (Same CDS sequence) XM_015779021.2 , XM_015779021.1
    Accession Version XM_015779021.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1632bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product (+)-germacrene D synthase isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029259.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015779021.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCCTCGA GTGATACTCC TACCCATGAG GAGGCACTCA GTTTTGAGCC CTCGATATGG 
    GGCGACTTCT TTATCAACTA CGAACCACAA CCATTGCAGA GATCAGAGAG GTGGATGCAG 
    GAGAGGGCTG AGAAGCTGAG AGGGCAAATC CAGACACTAT TTGGGACCTG CCACGACATG 
    TCGGCGAGGA TGAACTTAGT GGATTCCGTC CAACATCTCG GAATTGATCA CCTCTTCCAA 
    GAGGAGATAG AAGATGCTCT AACAAGCATC CATGGCAGTG AATTCAGAAG CTCTAGTCTC 
    TATGAGATTG CTCTTCGGTT TCGCTTGCTT AGGGAACATG GGTTTTGGGT GTCTCCAGAT 
    GCATTCAATA AATTTAAGGG AGATGATGGC AAGTTTCGAA ATGATATAGC GAATGACCCA 
    AAGGGGCTAC TAAGTTTATA CAACGCTGCA CACCTCCTCA TTCATGGCGA GCCAGAACTT 
    GAAGAAGCAA TCTCATTTGC ACGAAAACAC CTTGAATTGA TGAGTCAAGA CAGTGTTCTC 
    AACCCTCCAT TAGCTGAGCA AGTCAAGCGT GCACTTAGCC TACCACTGCC AAGGACTTTC 
    AAGAGAGTTG AGACTATTTG CTACATGTCG GAGTACGAAC GAGAGGTGGG AAATATTCCA 
    CTTCTTCTTG AACTTGCGAA GCTAGATTTT AACCTCCTGC AACATATCCA CTTGGAGGAA 
    CTCAAAGCAA TTTCTGAATG GTGGAAAGAT CTTTATGGAT ATATGGAGCT ACGTTACATT 
    AGGGATCGTA CGATAGAGGC ATACGCTTGG TCCTACATGA TGTTCTACGA AGAAGACTTT 
    GCATTCACCA GAATGTTTGT TGCCAAAATA ATTGCACTGG ATACTGTGAT GGATGATACG 
    TATGATGCTC ATGCCACCGT TGAGGAATGC CGGCAGCTAA ACACAGCCAT ACAAAGATGG 
    GACAAAAGCG CTATTTCTAT TTTGCCGGAG TACCTGAAAA AGTTCTATAT TAAATTGCTA 
    ATCAACTTTG AGGAGTTTGA GCACCAAGTG TCCGACAACG AAAAATACAA GGTTACTTAC 
    ACCAAACAAG AGTTTCAAAG GCAGTCTACT TATTACCTAC AAGAAGCTGA ATGGTCCTAC 
    CAGAAACACA AGCCAAGCTT TAAAGATCAG GTGGTTTTGT CCACCAAATC CTCGGCCGTG 
    CAATTAGTGT GTGTGGCTGC TATGATTGGC TGGGGTAATG CAGTGACGAC AGAAGCATTC 
    GAGTGGGCAG CTAGTGGTAA TGATGCAGTC ATAGCATGCG CAAAGATTGG ACGTTTTATG 
    AATGATATTG CTGCATTTAA GTGTGGAAAG AACAAGGGAG ATGTTGCGAG CTCCGTAGAG 
    TGTTACATGA ATGAGAATAG GGTCACAAGC GAGGTCGCCT TTGCAAAGAT TGATTCACTG 
    GTCGAAGATG AATGGAGAAC CACGAACCAG ACCCGCCTTG AGCATGGTAC ACTGCTGCCC 
    ATGGTGCAGC GAGTTGTGAA CTTCACCGTT TCTATGGTAC TCTTCTACGA TGACAGGAAT 
    GATGCCTACA CATTTGCCAC ACTTCTTAGG GAGATTATAG AGTCTCTCTT CGTGAGGCCT 
    GCTCCCATCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015634507.1
    CDS127..1758
    Translation

    Target ORF information:

    RefSeq Version XM_015779021.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015779021.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCCTCGA GTGATACTCC TACCCATGAG GAGGCACTCA GTTTTGAGCC CTCGATATGG 
    GGCGACTTCT TTATCAACTA CGAACCACAA CCATTGCAGA GATCAGAGAG GTGGATGCAG 
    GAGAGGGCTG AGAAGCTGAG AGGGCAAATC CAGACACTAT TTGGGACCTG CCACGACATG 
    TCGGCGAGGA TGAACTTAGT GGATTCCGTC CAACATCTCG GAATTGATCA CCTCTTCCAA 
    GAGGAGATAG AAGATGCTCT AACAAGCATC CATGGCAGTG AATTCAGAAG CTCTAGTCTC 
    TATGAGATTG CTCTTCGGTT TCGCTTGCTT AGGGAACATG GGTTTTGGGT GTCTCCAGAT 
    GCATTCAATA AATTTAAGGG AGATGATGGC AAGTTTCGAA ATGATATAGC GAATGACCCA 
    AAGGGGCTAC TAAGTTTATA CAACGCTGCA CACCTCCTCA TTCATGGCGA GCCAGAACTT 
    GAAGAAGCAA TCTCATTTGC ACGAAAACAC CTTGAATTGA TGAGTCAAGA CAGTGTTCTC 
    AACCCTCCAT TAGCTGAGCA AGTCAAGCGT GCACTTAGCC TACCACTGCC AAGGACTTTC 
    AAGAGAGTTG AGACTATTTG CTACATGTCG GAGTACGAAC GAGAGGTGGG AAATATTCCA 
    CTTCTTCTTG AACTTGCGAA GCTAGATTTT AACCTCCTGC AACATATCCA CTTGGAGGAA 
    CTCAAAGCAA TTTCTGAATG GTGGAAAGAT CTTTATGGAT ATATGGAGCT ACGTTACATT 
    AGGGATCGTA CGATAGAGGC ATACGCTTGG TCCTACATGA TGTTCTACGA AGAAGACTTT 
    GCATTCACCA GAATGTTTGT TGCCAAAATA ATTGCACTGG ATACTGTGAT GGATGATACG 
    TATGATGCTC ATGCCACCGT TGAGGAATGC CGGCAGCTAA ACACAGCCAT ACAAAGATGG 
    GACAAAAGCG CTATTTCTAT TTTGCCGGAG TACCTGAAAA AGTTCTATAT TAAATTGCTA 
    ATCAACTTTG AGGAGTTTGA GCACCAAGTG TCCGACAACG AAAAATACAA GGTTACTTAC 
    ACCAAACAAG AGTTTCAAAG GCAGTCTACT TATTACCTAC AAGAAGCTGA ATGGTCCTAC 
    CAGAAACACA AGCCAAGCTT TAAAGATCAG GTGGTTTTGT CCACCAAATC CTCGGCCGTG 
    CAATTAGTGT GTGTGGCTGC TATGATTGGC TGGGGTAATG CAGTGACGAC AGAAGCATTC 
    GAGTGGGCAG CTAGTGGTAA TGATGCAGTC ATAGCATGCG CAAAGATTGG ACGTTTTATG 
    AATGATATTG CTGCATTTAA GTGTGGAAAG AACAAGGGAG ATGTTGCGAG CTCCGTAGAG 
    TGTTACATGA ATGAGAATAG GGTCACAAGC GAGGTCGCCT TTGCAAAGAT TGATTCACTG 
    GTCGAAGATG AATGGAGAAC CACGAACCAG ACCCGCCTTG AGCATGGTAC ACTGCTGCCC 
    ATGGTGCAGC GAGTTGTGAA CTTCACCGTT TCTATGGTAC TCTTCTACGA TGACAGGAAT 
    GATGCCTACA CATTTGCCAC ACTTCTTAGG GAGATTATAG AGTCTCTCTT CGTGAGGCCT 
    GCTCCCATCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4335526 ( XM_015779021.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015634507.1 Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OOa31640
    Clone ID Related Accession (Same CDS sequence) XM_015779021.2 , XM_015779021.1
    Accession Version XM_015779021.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1632bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product (+)-germacrene D synthase isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379177.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCCTCGA GTGATACTCC TACCCATGAG GAGGCACTCA GTTTTGAGCC CTCGATATGG 
    GGCGACTTCT TTATCAACTA CGAACCACAA CCATTGCAGA GATCAGAGAG GTGGATGCAG 
    GAGAGGGCTG AGAAGCTGAG AGGGCAAATC CAGACACTAT TTGGGACCTG CCACGACATG 
    TCGGCGAGGA TGAACTTAGT GGATTCCGTC CAACATCTCG GAATTGATCA CCTCTTCCAA 
    GAGGAGATAG AAGATGCTCT AACAAGCATC CATGGCAGTG AATTCAGAAG CTCTAGTCTC 
    TATGAGATTG CTCTTCGGTT TCGCTTGCTT AGGGAACATG GGTTTTGGGT GTCTCCAGAT 
    GCATTCAATA AATTTAAGGG AGATGATGGC AAGTTTCGAA ATGATATAGC GAATGACCCA 
    AAGGGGCTAC TAAGTTTATA CAACGCTGCA CACCTCCTCA TTCATGGCGA GCCAGAACTT 
    GAAGAAGCAA TCTCATTTGC ACGAAAACAC CTTGAATTGA TGAGTCAAGA CAGTGTTCTC 
    AACCCTCCAT TAGCTGAGCA AGTCAAGCGT GCACTTAGCC TACCACTGCC AAGGACTTTC 
    AAGAGAGTTG AGACTATTTG CTACATGTCG GAGTACGAAC GAGAGGTGGG AAATATTCCA 
    CTTCTTCTTG AACTTGCGAA GCTAGATTTT AACCTCCTGC AACATATCCA CTTGGAGGAA 
    CTCAAAGCAA TTTCTGAATG GTGGAAAGAT CTTTATGGAT ATATGGAGCT ACGTTACATT 
    AGGGATCGTA CGATAGAGGC ATACGCTTGG TCCTACATGA TGTTCTACGA AGAAGACTTT 
    GCATTCACCA GAATGTTTGT TGCCAAAATA ATTGCACTGG ATACTGTGAT GGATGATACG 
    TATGATGCTC ATGCCACCGT TGAGGAATGC CGGCAGCTAA ACACAGCCAT ACAAAGATGG 
    GACAAAAGCG CTATTTCTAT TTTGCCGGAG TACCTGAAAA AGTTCTATAT TAAATTGCTA 
    ATCAACTTTG AGGAGTTTGA GCACCAAGTG TCCGACAACG AAAAATACAA GGTTACTTAC 
    ACCAAACAAG AGTTTCAAAG GCAGTCTACT TATTACCTAC AAGAAGCTGA ATGGTCCTAC 
    CAGAAACACA AGCCAAGCTT TAAAGATCAG GTGGTTTTGT CCACCAAATC CTCGGCCGTG 
    CAATTAGTGT GTGTGGCTGC TATGATTGGC TGGGGTAATG CAGTGACGAC AGAAGCATTC 
    GAGTGGGCAG CTAGTGGTAA TGATGCAGTC ATAGCATGCG CAAAGATTGG ACGTTTTATG 
    AATGATATTG CTGCATTTAA GTGTGGAAAG AACAAGGGAG ATGTTGCGAG CTCCGTAGAG 
    TGTTACATGA ATGAGAATAG GGTCACAAGC GAGGTCGCCT TTGCAAAGAT TGATTCACTG 
    GTCGAAGATG AATGGAGAAC CACGAACCAG ACCCGCCTTG AGCATGGTAC ACTGCTGCCC 
    ATGGTGCAGC GAGTTGTGAA CTTCACCGTT TCTATGGTAC TCTTCTACGA TGACAGGAAT 
    GATGCCTACA CATTTGCCAC ACTTCTTAGG GAGATTATAG AGTCTCTCTT CGTGAGGCCT 
    GCTCCCATCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015634507.1
    CDS132..1763
    Translation

    Target ORF information:

    RefSeq Version XM_015779021.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015779021.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCCTCGA GTGATACTCC TACCCATGAG GAGGCACTCA GTTTTGAGCC CTCGATATGG 
    GGCGACTTCT TTATCAACTA CGAACCACAA CCATTGCAGA GATCAGAGAG GTGGATGCAG 
    GAGAGGGCTG AGAAGCTGAG AGGGCAAATC CAGACACTAT TTGGGACCTG CCACGACATG 
    TCGGCGAGGA TGAACTTAGT GGATTCCGTC CAACATCTCG GAATTGATCA CCTCTTCCAA 
    GAGGAGATAG AAGATGCTCT AACAAGCATC CATGGCAGTG AATTCAGAAG CTCTAGTCTC 
    TATGAGATTG CTCTTCGGTT TCGCTTGCTT AGGGAACATG GGTTTTGGGT GTCTCCAGAT 
    GCATTCAATA AATTTAAGGG AGATGATGGC AAGTTTCGAA ATGATATAGC GAATGACCCA 
    AAGGGGCTAC TAAGTTTATA CAACGCTGCA CACCTCCTCA TTCATGGCGA GCCAGAACTT 
    GAAGAAGCAA TCTCATTTGC ACGAAAACAC CTTGAATTGA TGAGTCAAGA CAGTGTTCTC 
    AACCCTCCAT TAGCTGAGCA AGTCAAGCGT GCACTTAGCC TACCACTGCC AAGGACTTTC 
    AAGAGAGTTG AGACTATTTG CTACATGTCG GAGTACGAAC GAGAGGTGGG AAATATTCCA 
    CTTCTTCTTG AACTTGCGAA GCTAGATTTT AACCTCCTGC AACATATCCA CTTGGAGGAA 
    CTCAAAGCAA TTTCTGAATG GTGGAAAGAT CTTTATGGAT ATATGGAGCT ACGTTACATT 
    AGGGATCGTA CGATAGAGGC ATACGCTTGG TCCTACATGA TGTTCTACGA AGAAGACTTT 
    GCATTCACCA GAATGTTTGT TGCCAAAATA ATTGCACTGG ATACTGTGAT GGATGATACG 
    TATGATGCTC ATGCCACCGT TGAGGAATGC CGGCAGCTAA ACACAGCCAT ACAAAGATGG 
    GACAAAAGCG CTATTTCTAT TTTGCCGGAG TACCTGAAAA AGTTCTATAT TAAATTGCTA 
    ATCAACTTTG AGGAGTTTGA GCACCAAGTG TCCGACAACG AAAAATACAA GGTTACTTAC 
    ACCAAACAAG AGTTTCAAAG GCAGTCTACT TATTACCTAC AAGAAGCTGA ATGGTCCTAC 
    CAGAAACACA AGCCAAGCTT TAAAGATCAG GTGGTTTTGT CCACCAAATC CTCGGCCGTG 
    CAATTAGTGT GTGTGGCTGC TATGATTGGC TGGGGTAATG CAGTGACGAC AGAAGCATTC 
    GAGTGGGCAG CTAGTGGTAA TGATGCAGTC ATAGCATGCG CAAAGATTGG ACGTTTTATG 
    AATGATATTG CTGCATTTAA GTGTGGAAAG AACAAGGGAG ATGTTGCGAG CTCCGTAGAG 
    TGTTACATGA ATGAGAATAG GGTCACAAGC GAGGTCGCCT TTGCAAAGAT TGATTCACTG 
    GTCGAAGATG AATGGAGAAC CACGAACCAG ACCCGCCTTG AGCATGGTAC ACTGCTGCCC 
    ATGGTGCAGC GAGTTGTGAA CTTCACCGTT TCTATGGTAC TCTTCTACGA TGACAGGAAT 
    GATGCCTACA CATTTGCCAC ACTTCTTAGG GAGATTATAG AGTCTCTCTT CGTGAGGCCT 
    GCTCCCATCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4335526 ( XM_015779022.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015634508.1 Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OOa31641
    Clone ID Related Accession (Same CDS sequence) XM_015779022.1
    Accession Version XM_015779022.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1599bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product (+)-germacrene D synthase isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379177.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGGCGAC TTCTTTATCA ACTACGAACC ACAACCATTG CAGGCATCAC CACTACTCAT 
    TCCTATAGAT CAGAGAGGTG GATGCAGGAG AGGGCTGAGA AGCTGAGAGG GCAAATCCAG 
    ACACTATTTG GGACCTGCCA CGACATGTCG GCGAGGATGA ACTTAGTGGA TTCCGTCCAA 
    CATCTCGGAA TTGATCACCT CTTCCAAGAG GAGATAGAAG ATGCTCTAAC AAGCATCCAT 
    GGCAGTGAAT TCAGAAGCTC TAGTCTCTAT GAGATTGCTC TTCGGTTTCG CTTGCTTAGG 
    GAACATGGGT TTTGGGTGTC TCCAGATGCA TTCAATAAAT TTAAGGGAGA TGATGGCAAG 
    TTTCGAAATG ATATAGCGAA TGACCCAAAG GGGCTACTAA GTTTATACAA CGCTGCACAC 
    CTCCTCATTC ATGGCGAGCC AGAACTTGAA GAAGCAATCT CATTTGCACG AAAACACCTT 
    GAATTGATGA GTCAAGACAG TGTTCTCAAC CCTCCATTAG CTGAGCAAGT CAAGCGTGCA 
    CTTAGCCTAC CACTGCCAAG GACTTTCAAG AGAGTTGAGA CTATTTGCTA CATGTCGGAG 
    TACGAACGAG AGGTGGGAAA TATTCCACTT CTTCTTGAAC TTGCGAAGCT AGATTTTAAC 
    CTCCTGCAAC ATATCCACTT GGAGGAACTC AAAGCAATTT CTGAATGGTG GAAAGATCTT 
    TATGGATATA TGGAGCTACG TTACATTAGG GATCGTACGA TAGAGGCATA CGCTTGGTCC 
    TACATGATGT TCTACGAAGA AGACTTTGCA TTCACCAGAA TGTTTGTTGC CAAAATAATT 
    GCACTGGATA CTGTGATGGA TGATACGTAT GATGCTCATG CCACCGTTGA GGAATGCCGG 
    CAGCTAAACA CAGCCATACA AAGATGGGAC AAAAGCGCTA TTTCTATTTT GCCGGAGTAC 
    CTGAAAAAGT TCTATATTAA ATTGCTAATC AACTTTGAGG AGTTTGAGCA CCAAGTGTCC 
    GACAACGAAA AATACAAGGT TACTTACACC AAACAAGAGT TTCAAAGGCA GTCTACTTAT 
    TACCTACAAG AAGCTGAATG GTCCTACCAG AAACACAAGC CAAGCTTTAA AGATCAGGTG 
    GTTTTGTCCA CCAAATCCTC GGCCGTGCAA TTAGTGTGTG TGGCTGCTAT GATTGGCTGG 
    GGTAATGCAG TGACGACAGA AGCATTCGAG TGGGCAGCTA GTGGTAATGA TGCAGTCATA 
    GCATGCGCAA AGATTGGACG TTTTATGAAT GATATTGCTG CATTTAAGTG TGGAAAGAAC 
    AAGGGAGATG TTGCGAGCTC CGTAGAGTGT TACATGAATG AGAATAGGGT CACAAGCGAG 
    GTCGCCTTTG CAAAGATTGA TTCACTGGTC GAAGATGAAT GGAGAACCAC GAACCAGACC 
    CGCCTTGAGC ATGGTACACT GCTGCCCATG GTGCAGCGAG TTGTGAACTT CACCGTTTCT 
    ATGGTACTCT TCTACGATGA CAGGAATGAT GCCTACACAT TTGCCACACT TCTTAGGGAG 
    ATTATAGAGT CTCTCTTCGT GAGGCCTGCT CCCATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015634508.1
    CDS92..1690
    Translation

    Target ORF information:

    RefSeq Version XM_015779022.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015779022.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGGGCGAC TTCTTTATCA ACTACGAACC ACAACCATTG CAGGCATCAC CACTACTCAT 
    TCCTATAGAT CAGAGAGGTG GATGCAGGAG AGGGCTGAGA AGCTGAGAGG GCAAATCCAG 
    ACACTATTTG GGACCTGCCA CGACATGTCG GCGAGGATGA ACTTAGTGGA TTCCGTCCAA 
    CATCTCGGAA TTGATCACCT CTTCCAAGAG GAGATAGAAG ATGCTCTAAC AAGCATCCAT 
    GGCAGTGAAT TCAGAAGCTC TAGTCTCTAT GAGATTGCTC TTCGGTTTCG CTTGCTTAGG 
    GAACATGGGT TTTGGGTGTC TCCAGATGCA TTCAATAAAT TTAAGGGAGA TGATGGCAAG 
    TTTCGAAATG ATATAGCGAA TGACCCAAAG GGGCTACTAA GTTTATACAA CGCTGCACAC 
    CTCCTCATTC ATGGCGAGCC AGAACTTGAA GAAGCAATCT CATTTGCACG AAAACACCTT 
    GAATTGATGA GTCAAGACAG TGTTCTCAAC CCTCCATTAG CTGAGCAAGT CAAGCGTGCA 
    CTTAGCCTAC CACTGCCAAG GACTTTCAAG AGAGTTGAGA CTATTTGCTA CATGTCGGAG 
    TACGAACGAG AGGTGGGAAA TATTCCACTT CTTCTTGAAC TTGCGAAGCT AGATTTTAAC 
    CTCCTGCAAC ATATCCACTT GGAGGAACTC AAAGCAATTT CTGAATGGTG GAAAGATCTT 
    TATGGATATA TGGAGCTACG TTACATTAGG GATCGTACGA TAGAGGCATA CGCTTGGTCC 
    TACATGATGT TCTACGAAGA AGACTTTGCA TTCACCAGAA TGTTTGTTGC CAAAATAATT 
    GCACTGGATA CTGTGATGGA TGATACGTAT GATGCTCATG CCACCGTTGA GGAATGCCGG 
    CAGCTAAACA CAGCCATACA AAGATGGGAC AAAAGCGCTA TTTCTATTTT GCCGGAGTAC 
    CTGAAAAAGT TCTATATTAA ATTGCTAATC AACTTTGAGG AGTTTGAGCA CCAAGTGTCC 
    GACAACGAAA AATACAAGGT TACTTACACC AAACAAGAGT TTCAAAGGCA GTCTACTTAT 
    TACCTACAAG AAGCTGAATG GTCCTACCAG AAACACAAGC CAAGCTTTAA AGATCAGGTG 
    GTTTTGTCCA CCAAATCCTC GGCCGTGCAA TTAGTGTGTG TGGCTGCTAT GATTGGCTGG 
    GGTAATGCAG TGACGACAGA AGCATTCGAG TGGGCAGCTA GTGGTAATGA TGCAGTCATA 
    GCATGCGCAA AGATTGGACG TTTTATGAAT GATATTGCTG CATTTAAGTG TGGAAAGAAC 
    AAGGGAGATG TTGCGAGCTC CGTAGAGTGT TACATGAATG AGAATAGGGT CACAAGCGAG 
    GTCGCCTTTG CAAAGATTGA TTCACTGGTC GAAGATGAAT GGAGAACCAC GAACCAGACC 
    CGCCTTGAGC ATGGTACACT GCTGCCCATG GTGCAGCGAG TTGTGAACTT CACCGTTTCT 
    ATGGTACTCT TCTACGATGA CAGGAATGAT GCCTACACAT TTGCCACACT TCTTAGGGAG 
    ATTATAGAGT CTCTCTTCGT GAGGCCTGCT CCCATCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC4335526 ( XM_026024545.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_025880330.1 Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OOa46709
    Clone ID Related Accession (Same CDS sequence) XM_026024545.1
    Accession Version XM_026024545.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1632bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product (+)-germacrene D synthase isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029259.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGAGGAGGC ACTCAGTTTT GAGCCCTCGA TATGGGGCGA CTTCTTTATC AACTACGAAC 
    CACAACCATT GCAGGCATCA CCACTACTCA TTCCTATGTA GATCAGAGAG GTGGATGCAG 
    GAGAGGGCTG AGAAGCTGAG AGGGCAAATC CAGACACTAT TTGGGACCTG CCACGACATG 
    TCGGCGAGGA TGAACTTAGT GGATTCCGTC CAACATCTCG GAATTGATCA CCTCTTCCAA 
    GAGGAGATAG AAGATGCTCT AACAAGCATC CATGGCAGTG AATTCAGAAG CTCTAGTCTC 
    TATGAGATTG CTCTTCGGTT TCGCTTGCTT AGGGAACATG GGTTTTGGGT GTCTCCAGAT 
    GCATTCAATA AATTTAAGGG AGATGATGGC AAGTTTCGAA ATGATATAGC GAATGACCCA 
    AAGGGGCTAC TAAGTTTATA CAACGCTGCA CACCTCCTCA TTCATGGCGA GCCAGAACTT 
    GAAGAAGCAA TCTCATTTGC ACGAAAACAC CTTGAATTGA TGAGTCAAGA CAGTGTTCTC 
    AACCCTCCAT TAGCTGAGCA AGTCAAGCGT GCACTTAGCC TACCACTGCC AAGGACTTTC 
    AAGAGAGTTG AGACTATTTG CTACATGTCG GAGTACGAAC GAGAGGTGGG AAATATTCCA 
    CTTCTTCTTG AACTTGCGAA GCTAGATTTT AACCTCCTGC AACATATCCA CTTGGAGGAA 
    CTCAAAGCAA TTTCTGAATG GTGGAAAGAT CTTTATGGAT ATATGGAGCT ACGTTACATT 
    AGGGATCGTA CGATAGAGGC ATACGCTTGG TCCTACATGA TGTTCTACGA AGAAGACTTT 
    GCATTCACCA GAATGTTTGT TGCCAAAATA ATTGCACTGG ATACTGTGAT GGATGATACG 
    TATGATGCTC ATGCCACCGT TGAGGAATGC CGGCAGCTAA ACACAGCCAT ACAAAGATGG 
    GACAAAAGCG CTATTTCTAT TTTGCCGGAG TACCTGAAAA AGTTCTATAT TAAATTGCTA 
    ATCAACTTTG AGGAGTTTGA GCACCAAGTG TCCGACAACG AAAAATACAA GGTTACTTAC 
    ACCAAACAAG AGTTTCAAAG GCAGTCTACT TATTACCTAC AAGAAGCTGA ATGGTCCTAC 
    CAGAAACACA AGCCAAGCTT TAAAGATCAG GTGGTTTTGT CCACCAAATC CTCGGCCGTG 
    CAATTAGTGT GTGTGGCTGC TATGATTGGC TGGGGTAATG CAGTGACGAC AGAAGCATTC 
    GAGTGGGCAG CTAGTGGTAA TGATGCAGTC ATAGCATGCG CAAAGATTGG ACGTTTTATG 
    AATGATATTG CTGCATTTAA GTGTGGAAAG AACAAGGGAG ATGTTGCGAG CTCCGTAGAG 
    TGTTACATGA ATGAGAATAG GGTCACAAGC GAGGTCGCCT TTGCAAAGAT TGATTCACTG 
    GTCGAAGATG AATGGAGAAC CACGAACCAG ACCCGCCTTG AGCATGGTAC ACTGCTGCCC 
    ATGGTGCAGC GAGTTGTGAA CTTCACCGTT TCTATGGTAC TCTTCTACGA TGACAGGAAT 
    GATGCCTACA CATTTGCCAC ACTTCTTAGG GAGATTATAG AGTCTCTCTT CGTGAGGCCT 
    GCTCCCATCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_025880330.1
    CDS118..1749
    Translation

    Target ORF information:

    RefSeq Version XM_026024545.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group (+)-germacrene D synthase (LOC4335526), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_026024545.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGAGGAGGC ACTCAGTTTT GAGCCCTCGA TATGGGGCGA CTTCTTTATC AACTACGAAC 
    CACAACCATT GCAGGCATCA CCACTACTCA TTCCTATGTA GATCAGAGAG GTGGATGCAG 
    GAGAGGGCTG AGAAGCTGAG AGGGCAAATC CAGACACTAT TTGGGACCTG CCACGACATG 
    TCGGCGAGGA TGAACTTAGT GGATTCCGTC CAACATCTCG GAATTGATCA CCTCTTCCAA 
    GAGGAGATAG AAGATGCTCT AACAAGCATC CATGGCAGTG AATTCAGAAG CTCTAGTCTC 
    TATGAGATTG CTCTTCGGTT TCGCTTGCTT AGGGAACATG GGTTTTGGGT GTCTCCAGAT 
    GCATTCAATA AATTTAAGGG AGATGATGGC AAGTTTCGAA ATGATATAGC GAATGACCCA 
    AAGGGGCTAC TAAGTTTATA CAACGCTGCA CACCTCCTCA TTCATGGCGA GCCAGAACTT 
    GAAGAAGCAA TCTCATTTGC ACGAAAACAC CTTGAATTGA TGAGTCAAGA CAGTGTTCTC 
    AACCCTCCAT TAGCTGAGCA AGTCAAGCGT GCACTTAGCC TACCACTGCC AAGGACTTTC 
    AAGAGAGTTG AGACTATTTG CTACATGTCG GAGTACGAAC GAGAGGTGGG AAATATTCCA 
    CTTCTTCTTG AACTTGCGAA GCTAGATTTT AACCTCCTGC AACATATCCA CTTGGAGGAA 
    CTCAAAGCAA TTTCTGAATG GTGGAAAGAT CTTTATGGAT ATATGGAGCT ACGTTACATT 
    AGGGATCGTA CGATAGAGGC ATACGCTTGG TCCTACATGA TGTTCTACGA AGAAGACTTT 
    GCATTCACCA GAATGTTTGT TGCCAAAATA ATTGCACTGG ATACTGTGAT GGATGATACG 
    TATGATGCTC ATGCCACCGT TGAGGAATGC CGGCAGCTAA ACACAGCCAT ACAAAGATGG 
    GACAAAAGCG CTATTTCTAT TTTGCCGGAG TACCTGAAAA AGTTCTATAT TAAATTGCTA 
    ATCAACTTTG AGGAGTTTGA GCACCAAGTG TCCGACAACG AAAAATACAA GGTTACTTAC 
    ACCAAACAAG AGTTTCAAAG GCAGTCTACT TATTACCTAC AAGAAGCTGA ATGGTCCTAC 
    CAGAAACACA AGCCAAGCTT TAAAGATCAG GTGGTTTTGT CCACCAAATC CTCGGCCGTG 
    CAATTAGTGT GTGTGGCTGC TATGATTGGC TGGGGTAATG CAGTGACGAC AGAAGCATTC 
    GAGTGGGCAG CTAGTGGTAA TGATGCAGTC ATAGCATGCG CAAAGATTGG ACGTTTTATG 
    AATGATATTG CTGCATTTAA GTGTGGAAAG AACAAGGGAG ATGTTGCGAG CTCCGTAGAG 
    TGTTACATGA ATGAGAATAG GGTCACAAGC GAGGTCGCCT TTGCAAAGAT TGATTCACTG 
    GTCGAAGATG AATGGAGAAC CACGAACCAG ACCCGCCTTG AGCATGGTAC ACTGCTGCCC 
    ATGGTGCAGC GAGTTGTGAA CTTCACCGTT TCTATGGTAC TCTTCTACGA TGACAGGAAT 
    GATGCCTACA CATTTGCCAC ACTTCTTAGG GAGATTATAG AGTCTCTCTT CGTGAGGCCT 
    GCTCCCATCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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