ORF » Species Summary » Oryza sativa Japonica Group » LOC107277090 cDNA ORF clone

LOC107277090 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

The following LOC107277090 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107277090 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa44718 XM_015757693.2
Latest version!		 Oryza sativa Japonica Group probable E3 ubiquitin-protein ligase ATL45 (LOC107277090), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OOa40202 XM_015757693.1
Latest version!		 Oryza sativa Japonica Group RING-H2 finger protein ATL39-like (LOC107277090), mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC107277090 ( XM_015757693.2 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015613179.2 Oryza sativa Japonica Group probable E3 ubiquitin-protein ligase ATL45 (LOC107277090), mRNA.
    Price & Availability↑
    CloneID OOa44718
    Clone ID Related Accession (Same CDS sequence) XM_015757693.2
    Accession Version XM_015757693.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 852bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product probable E3 ubiquitin-protein ligase ATL45
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029265.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015757693.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTTAGCA AATGCCACAA GCAAAACGAG GCTATCAACT GCGCAAATGC CACCTATACC 
    CAAGATAAAA ACTCTCCTCC GCCTCCTCGC ATTCCCAAAG CCCAAACGCC CGCAGGAAGC 
    TGCACCCAGA GCGCGTCGGC GTCGCGCACA CAGGGCGGCC AGAGCATGGC CACGGCGCCG 
    CGCGCGAGGC GCCTGGCCGC CGCCGACGTG CAGCCGGCCA CGCCGGCGGT CGGCCCAGCG 
    TCCGGCGGGC GGCCCCAGTT CAACCTCTCG TCGGGCGCGG CCACCGCCGT GGTATTCGTC 
    TCCATCGTCC TCTGCTTCAT CCTGCTCTGC ACCTACTGCC GCTGCGCCAG GCAGCGCGCC 
    ATCGCCGGCG CGCGCAGCCG CGTCATGCGC GAGATCCGGG AGCGCGTCCC GGGCGTCCTC 
    CTCCTCCGCC CCGCCGCCGC CGCCGCCGCG CTGCCCGTCC TCCCCTACTC CGCCGCCGCC 
    GCCGCCGCGG GCGCCAAGAA GGGGCCGCTC GTCGAGGACT GCCCCGTCTG CCTCGAGGCC 
    TTCGCCGGCG ACGACGGCGT CAAGGTCGTC CCCGCGTGCG GCCACGTGTT CCACGCCGCC 
    TGCATCGACC AGTGGCTCGC CGTGCGGAAC TCCTGCCCCG TCTGCCGCTG CGCCGTCGTC 
    TGCTACTACG CCGACCGCGC GAGGGACACG GCGGTGGTGG TCGACGACGA CGACGACGAC 
    CAGGAGGTCG TCCTGGAGCG CGTGGTTGCG ATGATCGAGG CGATACGAGA AGAACAGAGG 
    GAAGAGGAGG CGGCGGCGAG GCGCGCGCCG GCGAGCGATG GCGGGGGAGG CGAGGGGTTG 
    ATGACGTCAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015613179.2
    CDS426..1277
    Translation

    Target ORF information:

    RefSeq Version XM_015757693.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group probable E3 ubiquitin-protein ligase ATL45 (LOC107277090), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015757693.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTTAGCA AATGCCACAA GCAAAACGAG GCTATCAACT GCGCAAATGC CACCTATACC 
    CAAGATAAAA ACTCTCCTCC GCCTCCTCGC ATTCCCAAAG CCCAAACGCC CGCAGGAAGC 
    TGCACCCAGA GCGCGTCGGC GTCGCGCACA CAGGGCGGCC AGAGCATGGC CACGGCGCCG 
    CGCGCGAGGC GCCTGGCCGC CGCCGACGTG CAGCCGGCCA CGCCGGCGGT CGGCCCAGCG 
    TCCGGCGGGC GGCCCCAGTT CAACCTCTCG TCGGGCGCGG CCACCGCCGT GGTATTCGTC 
    TCCATCGTCC TCTGCTTCAT CCTGCTCTGC ACCTACTGCC GCTGCGCCAG GCAGCGCGCC 
    ATCGCCGGCG CGCGCAGCCG CGTCATGCGC GAGATCCGGG AGCGCGTCCC GGGCGTCCTC 
    CTCCTCCGCC CCGCCGCCGC CGCCGCCGCG CTGCCCGTCC TCCCCTACTC CGCCGCCGCC 
    GCCGCCGCGG GCGCCAAGAA GGGGCCGCTC GTCGAGGACT GCCCCGTCTG CCTCGAGGCC 
    TTCGCCGGCG ACGACGGCGT CAAGGTCGTC CCCGCGTGCG GCCACGTGTT CCACGCCGCC 
    TGCATCGACC AGTGGCTCGC CGTGCGGAAC TCCTGCCCCG TCTGCCGCTG CGCCGTCGTC 
    TGCTACTACG CCGACCGCGC GAGGGACACG GCGGTGGTGG TCGACGACGA CGACGACGAC 
    CAGGAGGTCG TCCTGGAGCG CGTGGTTGCG ATGATCGAGG CGATACGAGA AGAACAGAGG 
    GAAGAGGAGG CGGCGGCGAG GCGCGCGCCG GCGAGCGATG GCGGGGGAGG CGAGGGGTTG 
    ATGACGTCAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC107277090 ( XM_015757693.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015613179.1 Oryza sativa Japonica Group RING-H2 finger protein ATL39-like (LOC107277090), mRNA.
    Price & Availability↑
    CloneID OOa40202
    Clone ID Related Accession (Same CDS sequence) XM_015757693.1
    Accession Version XM_015757693.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 687bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product RING-H2 finger protein ATL39-like
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379183.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGGCCACGG CGCCGCGCGC GAGGCGCCTG GCCGCCGCCG ACGTGCAGCC GGCCACGCCG 
    GCGGTCGGCC CAGCGTCCGG CGGGCGGCCC CAGTTCAACC TCTCGTCGGG CGCGGCCACC 
    GCCGTGGTAT TCGTCTCCAT CGTCCTCTGC TTCATCCTGC TCTGCACCTA CTGCCGCTGC 
    GCCAGGCAGC GCGCCATCGC CGGCGCGCGC AGCCGCGTCA TGCGCGAGAT CCGGGAGCGC 
    GTCCCGGGCG TCCTCCTCCT CCGCCCCGCC GCCGCCGCCG CCGCGCTGCC CGTCCTCCCC 
    TACTCCGCCG CCGCCGCCGC CGCGGGCGCC AAGAAGGGGC CGCTCGTCGA GGACTGCCCC 
    GTCTGCCTCG AGGCCTTCGC CGGCGACGAC GGCGTCAAGG TCGTCCCCGC GTGCGGCCAC 
    GTGTTCCACG CCGCCTGCAT CGACCAGTGG CTCGCCGTGC GGAACTCCTG CCCCGTCTGC 
    CGCTGCGCCG TCGTCTGCTA CTACGCCGAC CGCGCGAGGG ACACGGCGGT GGTGGTCGAC 
    GACGACGACG ACGACCAGGA GGTCGTCCTG GAGCGCGTGG TTGCGATGAT CGAGGCGATA 
    CGAGAAGAAC AGAGGGAAGA GGAGGCGGCG GCGAGGCGCG CGCCGGCGAG CGATGGCGGG 
    GGAGGCGAGG GGTTGATGAC GTCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015613179.1
    CDS87..773
    Translation

    Target ORF information:

    RefSeq Version XM_015757693.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group RING-H2 finger protein ATL39-like (LOC107277090), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015757693.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGGCCACGG CGCCGCGCGC GAGGCGCCTG GCCGCCGCCG ACGTGCAGCC GGCCACGCCG 
    GCGGTCGGCC CAGCGTCCGG CGGGCGGCCC CAGTTCAACC TCTCGTCGGG CGCGGCCACC 
    GCCGTGGTAT TCGTCTCCAT CGTCCTCTGC TTCATCCTGC TCTGCACCTA CTGCCGCTGC 
    GCCAGGCAGC GCGCCATCGC CGGCGCGCGC AGCCGCGTCA TGCGCGAGAT CCGGGAGCGC 
    GTCCCGGGCG TCCTCCTCCT CCGCCCCGCC GCCGCCGCCG CCGCGCTGCC CGTCCTCCCC 
    TACTCCGCCG CCGCCGCCGC CGCGGGCGCC AAGAAGGGGC CGCTCGTCGA GGACTGCCCC 
    GTCTGCCTCG AGGCCTTCGC CGGCGACGAC GGCGTCAAGG TCGTCCCCGC GTGCGGCCAC 
    GTGTTCCACG CCGCCTGCAT CGACCAGTGG CTCGCCGTGC GGAACTCCTG CCCCGTCTGC 
    CGCTGCGCCG TCGTCTGCTA CTACGCCGAC CGCGCGAGGG ACACGGCGGT GGTGGTCGAC 
    GACGACGACG ACGACCAGGA GGTCGTCCTG GAGCGCGTGG TTGCGATGAT CGAGGCGATA 
    CGAGAAGAAC AGAGGGAAGA GGAGGCGGCG GCGAGGCGCG CGCCGGCGAG CGATGGCGGG 
    GGAGGCGAGG GGTTGATGAC GTCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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