Gene Symbol | vvd |
Entrez Gene ID | 3873728 |
Full Name | vivid |
Gene Type | protein-coding |
Organism | Neurospora crassa OR74A |
ORF » Species Summary » Neurospora crassa OR74A » vvd cDNA ORF clone
Gene Symbol | vvd |
Entrez Gene ID | 3873728 |
Full Name | vivid |
Gene Type | protein-coding |
Organism | Neurospora crassa OR74A |
mRNA | Protein | Name |
---|---|---|
XM_952513.3 | XP_957606.3 | vivid PAS protein VVD |
The genome sequence of the filamentous fungus Neurospora crassa.
Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, Jaffe D, FitzHugh W, Ma LJ, Smirnov S, Purcell S, Rehman B, Elkins T, Engels R, Wang S, Nielsen CB, Butler J, Endrizzi M, Qui D, Ianakiev P, Bell-Pedersen D, Nelson MA, Werner-Washburne M, Selitrennikoff CP, Kinsey JA, Braun EL, Zelter A, Schulte U, Kothe GO, Jedd G, Mewes W, Staben C, Marcotte E, Greenberg D, Roy A, Foley K, Naylor J, Stange-Thomann N, Barrett R, Gnerre S, Kamal M, Kamvysselis M, Mauceli E, Bielke C, Rudd S, Frishman D, Krystofova S, Rasmussen C, Metzenberg RL, Perkins DD, Kroken S, Cogoni C, Macino G, Catcheside D, Li W, Pratt RJ, Osmani SA, DeSouza CP, Glass L, Orbach MJ, Berglund JA, Voelker R, Yarden O, Plamann M, Seiler S, Dunlap J, Radford A, Aramayo R, Natvig DO, Alex LA, Mannhaupt G, Ebbole DJ, Freitag M, Paulsen I, Sachs MS, Lander ES, Nusbaum C, Birren B
Nature422(6934)859-68(2003 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
VVD photocycle length appears sculpted to establish a VVD-WCC reservoir of sufficient size to sustain photoadaptation while maintaining sensitivity to changing light intensity.
Title: Biological Significance of Photoreceptor Photocycle Length: VIVID Photocycle Governs the Dynamic VIVID-White Collar Complex Pool Mediating Photo-adaptation and Response to Changes in Light Intensity.
VVD acts as an inhibitor of WCC-driven gene expression and, at the same time, as a positive regulator that maintains the responsiveness of the photosystem.
Title: The Neurospora photoreceptor VIVID exerts negative and positive control on light sensing to achieve adaptation.
WC-1, part of White Collar Complex (WCC), and VVD contain a flavin-binding light-oxygen-voltage (LOV) domain; VVD-mediated desensitization and stabilization of the light activated WCC explain how Neurospora can robustly entrain photoperiods.
Title: Photoadaptation in Neurospora by competitive interaction of activating and inhibitory LOV domains.
Data support a reaction scheme that describes the mechanism for light-induced dimerization of VVD.
Title: Illuminating solution responses of a LOV domain protein with photocoupled small-angle X-ray scattering.
VIVID (VVD) buffers the circadian system against temperature fluctuations. In vvd-null mutants, the circadian period of clock-controlled events such as asexual sporulation is temperature compensated, but the phase of this clock time marker is not.
Title: The PAS/LOV protein VIVID controls temperature compensation of circadian clock phase and development in Neurospora crassa.
The following vvd gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the vvd cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ONf10451 | |
Clone ID Related Accession (Same CDS sequence) | XM_952513.3 | |
Accession Version | XM_952513.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 561bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-10 | |
Organism | Neurospora crassa OR74A | |
Product | vivid PAS protein VVD | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_026506). On Feb 23, 2015 this sequence version replaced XM_952513.2. |
1 | ATGAGCCATA CCGTGAACTC GAGCACCATG AACCCATGGG AGGTTGAGGC GTATCAGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_957606.3 |
CDS | 1636..2196 |
Translation |
Target ORF information:
Target ORF information:
|
XM_952513.3 |
1 | ATGAGCCATA CCGTGAACTC GAGCACCATG AACCCATGGG AGGTTGAGGC GTATCAGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The genome sequence of the filamentous fungus Neurospora crassa. |