Otud1 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Otud1
Entrez Gene ID	71198
Full Name	OTU domain containing 1
Synonyms	4933428L19Rik
General protein information	Preferred Names OTU domain containing 1 Names OTU domain-containing protein 1 likely ortholog of H. sapiens OTU domain containing 1 (OTUD1)
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 2 Map Location: 2\|2 A3

mRNA and Protein(s)

mRNA	Protein	Name
NM_027715.1	NP_081991.1	OTU domain-containing protein 1
NM_027715.2	NP_081991.1	OTU domain-containing protein 1

Pathways from BioSystems

Homologies

Homo sapiens (human)	OTUD1	NP_001138845.1
Mus musculus (house mouse)	Otud1	NP_081991.1
Pan troglodytes (chimpanzee)	OTUD1	XP_521426.3
Rattus norvegicus (Norway rat)	Otud1	XP_574086.3
Bos taurus (cattle)	OTUD1	XP_005214353.1
Gallus gallus (chicken)	OTUD1	XP_418604.4
	OTUD1	XP_001097857.1

Gene Ontology
Bibliography

Related articles in PubMed

Next-generation sequencing identifies the Danforth's short tail mouse mutation as a retrotransposon insertion affecting Ptf1a expression.
Vlangos CN, Siuniak AN, Robinson D, Chinnaiyan AM, Lyons RH Jr, Cavalcoli JD, Keegan CE
PLoS genetics9(2)e1003205(2013)

A retrotransposon insertion in the 5' regulatory domain of Ptf1a results in ectopic gene expression and multiple congenital defects in Danforth's short tail mouse.
Lugani F, Arora R, Papeta N, Patel A, Zheng Z, Sterken R, Singer RA, Caridi G, Mendelsohn C, Sussel L, Papaioannou VE, Gharavi AG
PLoS genetics9(2)e1003206(2013)

Ptf1a, a bHLH transcriptional gene, defines GABAergic neuronal fates in cerebellum.
Hoshino M, Nakamura S, Mori K, Kawauchi T, Terao M, Nishimura YV, Fukuda A, Fuse T, Matsuo N, Sone M, Watanabe M, Bito H, Terashima T, Wright CV, Kawaguchi Y, Nakao K, Nabeshima Y
Neuron47(2)201-13(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Otud1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Otud1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OMu58577	NM_027715.2 Latest version!	Mus musculus OTU domain containing 1 (Otud1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$272.30 $389.00
View Old Accession Versions >>
OMu58577	NM_027715.1	Mus musculus OTU domain containing 1 (Otud1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$272.30 $389.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Otud1 ( NM_027715.1 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_081991.1 Mus musculus OTU domain containing 1 (Otud1), mRNA.

Price & Availability↑

CloneID	OMu58577
Clone ID Related Accession (Same CDS sequence)	NM_027715.1 , NM_027715.2
Accession Version	NM_027715.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1365bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-21
Organism	Mus musculus(house mouse)
Product	OTU domain-containing protein 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL928877.6. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. COMPLETENESS: complete on the 3' end.

ATGCAGCTCT ACAGCAGCGT GTGCACCCAT TACCCTGCGG GCACGCCGGG GCCCACGGCC 
GCCGCCCCGC CTGCCACCGC CGCCGCCGCC TTCAAGGTCT CCTTGCAGTC AGCCAGCCCC 
GCCGCCGCGG CCCCGGAGCC GGATACCGGA GAGCGCCCAC CCGCCGCGGC CACCGAACCA 
CGCGAAGCCG CCGCCGCCGC TGCCATGCCC GCCTTCTCTG CCTGCTTCGA GCGGTCCGGG 
TCCGCCGCCG CCCCGCCGGG CGCGTGCAGC AAGCCGCCGC TGCCGCCGCA CTTCACGTCC 
ACGGCGCACA TCGCCGTGCG GGCCCTGGGC GCCGAGCGCC TCCTGCTGCC GCCACCCTCA 
GCCCCCTCGC CGCCGCGTCG CGGTTCCTCT GCCTGGCTGC TGGAAGAGCT GCTCCGGCCC 
GACGAGCCCG CGGCCCCGAA CGCCGTCCGC GACGCTCCGG ACAGGAACTT CCGACTGAGC 
GAGCACCGCC AGGCCCTGGC AGCCTCCCAG CACCGGGCCC CTGCACCGGC CCCCGTCGGC 
CCGGAGCCCG GCGCCGGCCC GGGCTCCGGC CCGTGGGGTG AAGAGCGCCG GGCGGAGCGC 
AGTTCCCGGG GTTGGGACCG GGCGAGCGGT CGCAGCGACG CCTCCGGGTC TGACGCGCTC 
CGACGGCAAG ATCCCGAAGC CGAGGCTCAC CCGGTTCCGG CACCCGCTCG GAGCAGCGGC 
GAGCCGGCCC AGAACGGCGA AGGCGAAGCC GTAGGCACGT CCCGGGCGGA TCCCAGGGAC 
GAGAAGCTAG CCCTGTACCT GGCCGAGGTG GAGAGGCAGG ACAAGTACCT GAGGCAGAGA 
AACAAGTACC GATTCCACAT CATCCCCGAC GGCAACTGCC TCTACCGAGC TGTCAGCAAG 
ACTGTGTACG GGGACCAGAG CCTGCACCGG GAGCTGAGGG AGCAGACCGT GCACTACATC 
GCGGACCACC TGGACCACTT CAGCCCACTC ATTGAGGGCG ACGTGGGGGA GTTTATTATC 
GCTGCTGCCC AAGATGGGGC GTGGGCCGGA TATCCCGAAT TGCTGGCCAT GGGGCAGATG 
CTGAATGTGA ATATACACTT AACTACTGGA GGGAGGCTGG AGAGCCCCAC CGTGTCTACC 
ATGATCCACT ATCTGGGCCC AGAGGATTCT CTACGGCCCA GTATTTGGCT CAGTTGGCTC 
AGCAATGGAC ACTATGATGC TGTTTTTGAC CACTCCTATC CTAACCCAGA GTATGACAAT 
TGGTGCAAGC AAACCCAGAT ACAGAAAAAA CGCGATGAAG AACTTGCCAA GTCCATGGCC 
ATATCCCTGT CCAAAATGTA TATTGAACAA AATGCATGCT CTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_081991.1
CDS	1..1365
Translation	MQLYSSVCTHYPAGTPGPTAAAPPATAAAAFKVSLQSASPAAAAPEPDTGERPPAAATEPREAAAAAAMPAFSACFERSGSAAAPPGACSKPPLPPHFTSTAHIAVRALGAERLLLPPPSAPSPPRRGSSAWLLEELLRPDEPAAPNAVRDAPDRNFRLSEHRQALAASQHRAPAPAPVGPEPGAGPGSGPWGEERRAERSSRGWDRASGRSDASGSDALRRQDPEAEAHPVPAPARSSGEPAQNGEGEAVGTSRADPRDEKLALYLAEVERQDKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAVFDHSYPNPEYDNWCKQTQIQKKRDEELAKSMAISLSKMYIEQNACS

Target ORF information:

RefSeq Version	NM_027715.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus OTU domain containing 1 (Otud1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_027715.1

ORF Insert Sequence:

ATGCAGCTCT ACAGCAGCGT GTGCACCCAT TACCCTGCGG GCACGCCGGG GCCCACGGCC 
GCCGCCCCGC CTGCCACCGC CGCCGCCGCC TTCAAGGTCT CCTTGCAGTC AGCCAGCCCC 
GCCGCCGCGG CCCCGGAGCC GGATACCGGA GAGCGCCCAC CCGCCGCGGC CACCGAACCA 
CGCGAAGCCG CCGCCGCCGC TGCCATGCCC GCCTTCTCTG CCTGCTTCGA GCGGTCCGGG 
TCCGCCGCCG CCCCGCCGGG CGCGTGCAGC AAGCCGCCGC TGCCGCCGCA CTTCACGTCC 
ACGGCGCACA TCGCCGTGCG GGCCCTGGGC GCCGAGCGCC TCCTGCTGCC GCCACCCTCA 
GCCCCCTCGC CGCCGCGTCG CGGTTCCTCT GCCTGGCTGC TGGAAGAGCT GCTCCGGCCC 
GACGAGCCCG CGGCCCCGAA CGCCGTCCGC GACGCTCCGG ACAGGAACTT CCGACTGAGC 
GAGCACCGCC AGGCCCTGGC AGCCTCCCAG CACCGGGCCC CTGCACCGGC CCCCGTCGGC 
CCGGAGCCCG GCGCCGGCCC GGGCTCCGGC CCGTGGGGTG AAGAGCGCCG GGCGGAGCGC 
AGTTCCCGGG GTTGGGACCG GGCGAGCGGT CGCAGCGACG CCTCCGGGTC TGACGCGCTC 
CGACGGCAAG ATCCCGAAGC CGAGGCTCAC CCGGTTCCGG CACCCGCTCG GAGCAGCGGC 
GAGCCGGCCC AGAACGGCGA AGGCGAAGCC GTAGGCACGT CCCGGGCGGA TCCCAGGGAC 
GAGAAGCTAG CCCTGTACCT GGCCGAGGTG GAGAGGCAGG ACAAGTACCT GAGGCAGAGA 
AACAAGTACC GATTCCACAT CATCCCCGAC GGCAACTGCC TCTACCGAGC TGTCAGCAAG 
ACTGTGTACG GGGACCAGAG CCTGCACCGG GAGCTGAGGG AGCAGACCGT GCACTACATC 
GCGGACCACC TGGACCACTT CAGCCCACTC ATTGAGGGCG ACGTGGGGGA GTTTATTATC 
GCTGCTGCCC AAGATGGGGC GTGGGCCGGA TATCCCGAAT TGCTGGCCAT GGGGCAGATG 
CTGAATGTGA ATATACACTT AACTACTGGA GGGAGGCTGG AGAGCCCCAC CGTGTCTACC 
ATGATCCACT ATCTGGGCCC AGAGGATTCT CTACGGCCCA GTATTTGGCT CAGTTGGCTC 
AGCAATGGAC ACTATGATGC TGTTTTTGAC CACTCCTATC CTAACCCAGA GTATGACAAT 
TGGTGCAAGC AAACCCAGAT ACAGAAAAAA CGCGATGAAG AACTTGCCAA GTCCATGGCC 
ATATCCCTGT CCAAAATGTA TATTGAACAA AATGCATGCT CTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Otud1 ( NM_027715.2 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_081991.1 Mus musculus OTU domain containing 1 (Otud1), mRNA.

Price & Availability↑

CloneID	OMu58577
Clone ID Related Accession (Same CDS sequence)	NM_027715.1 , NM_027715.2
Accession Version	NM_027715.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1365bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-20
Organism	Mus musculus(house mouse)
Product	OTU domain-containing protein 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL928877.6. On Jun 21, 2019 this sequence version replaced NM_027715.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript is intronless :: SRR7652917.1040771.1, SRR7345562.2692734.1 [ECO:0000345] ##Evidence-Data-END## COMPLETENESS: full length.

ATGCAGCTCT ACAGCAGCGT GTGCACCCAT TACCCTGCGG GCACGCCGGG GCCCACGGCC 
GCCGCCCCGC CTGCCACCGC CGCCGCCGCC TTCAAGGTCT CCTTGCAGTC AGCCAGCCCC 
GCCGCCGCGG CCCCGGAGCC GGATACCGGA GAGCGCCCAC CCGCCGCGGC CACCGAACCA 
CGCGAAGCCG CCGCCGCCGC TGCCATGCCC GCCTTCTCTG CCTGCTTCGA GCGGTCCGGG 
TCCGCCGCCG CCCCGCCGGG CGCGTGCAGC AAGCCGCCGC TGCCGCCGCA CTTCACGTCC 
ACGGCGCACA TCGCCGTGCG GGCCCTGGGC GCCGAGCGCC TCCTGCTGCC GCCACCCTCA 
GCCCCCTCGC CGCCGCGTCG CGGTTCCTCT GCCTGGCTGC TGGAAGAGCT GCTCCGGCCC 
GACGAGCCCG CGGCCCCGAA CGCCGTCCGC GACGCTCCGG ACAGGAACTT CCGACTGAGC 
GAGCACCGCC AGGCCCTGGC AGCCTCCCAG CACCGGGCCC CTGCACCGGC CCCCGTCGGC 
CCGGAGCCCG GCGCCGGCCC GGGCTCCGGC CCGTGGGGTG AAGAGCGCCG GGCGGAGCGC 
AGTTCCCGGG GTTGGGACCG GGCGAGCGGT CGCAGCGACG CCTCCGGGTC TGACGCGCTC 
CGACGGCAAG ATCCCGAAGC CGAGGCTCAC CCGGTTCCGG CACCCGCTCG GAGCAGCGGC 
GAGCCGGCCC AGAACGGCGA AGGCGAAGCC GTAGGCACGT CCCGGGCGGA TCCCAGGGAC 
GAGAAGCTAG CCCTGTACCT GGCCGAGGTG GAGAGGCAGG ACAAGTACCT GAGGCAGAGA 
AACAAGTACC GATTCCACAT CATCCCCGAC GGCAACTGCC TCTACCGAGC TGTCAGCAAG 
ACTGTGTACG GGGACCAGAG CCTGCACCGG GAGCTGAGGG AGCAGACCGT GCACTACATC 
GCGGACCACC TGGACCACTT CAGCCCACTC ATTGAGGGCG ACGTGGGGGA GTTTATTATC 
GCTGCTGCCC AAGATGGGGC GTGGGCCGGA TATCCCGAAT TGCTGGCCAT GGGGCAGATG 
CTGAATGTGA ATATACACTT AACTACTGGA GGGAGGCTGG AGAGCCCCAC CGTGTCTACC 
ATGATCCACT ATCTGGGCCC AGAGGATTCT CTACGGCCCA GTATTTGGCT CAGTTGGCTC 
AGCAATGGAC ACTATGATGC TGTTTTTGAC CACTCCTATC CTAACCCAGA GTATGACAAT 
TGGTGCAAGC AAACCCAGAT ACAGAAAAAA CGCGATGAAG AACTTGCCAA GTCCATGGCC 
ATATCCCTGT CCAAAATGTA TATTGAACAA AATGCATGCT CTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_081991.1
CDS	332..1696
Translation	MQLYSSVCTHYPAGTPGPTAAAPPATAAAAFKVSLQSASPAAAAPEPDTGERPPAAATEPREAAAAAAMPAFSACFERSGSAAAPPGACSKPPLPPHFTSTAHIAVRALGAERLLLPPPSAPSPPRRGSSAWLLEELLRPDEPAAPNAVRDAPDRNFRLSEHRQALAASQHRAPAPAPVGPEPGAGPGSGPWGEERRAERSSRGWDRASGRSDASGSDALRRQDPEAEAHPVPAPARSSGEPAQNGEGEAVGTSRADPRDEKLALYLAEVERQDKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAVFDHSYPNPEYDNWCKQTQIQKKRDEELAKSMAISLSKMYIEQNACS

Target ORF information:

RefSeq Version	NM_027715.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus OTU domain containing 1 (Otud1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_027715.2

ORF Insert Sequence:

ATGCAGCTCT ACAGCAGCGT GTGCACCCAT TACCCTGCGG GCACGCCGGG GCCCACGGCC 
GCCGCCCCGC CTGCCACCGC CGCCGCCGCC TTCAAGGTCT CCTTGCAGTC AGCCAGCCCC 
GCCGCCGCGG CCCCGGAGCC GGATACCGGA GAGCGCCCAC CCGCCGCGGC CACCGAACCA 
CGCGAAGCCG CCGCCGCCGC TGCCATGCCC GCCTTCTCTG CCTGCTTCGA GCGGTCCGGG 
TCCGCCGCCG CCCCGCCGGG CGCGTGCAGC AAGCCGCCGC TGCCGCCGCA CTTCACGTCC 
ACGGCGCACA TCGCCGTGCG GGCCCTGGGC GCCGAGCGCC TCCTGCTGCC GCCACCCTCA 
GCCCCCTCGC CGCCGCGTCG CGGTTCCTCT GCCTGGCTGC TGGAAGAGCT GCTCCGGCCC 
GACGAGCCCG CGGCCCCGAA CGCCGTCCGC GACGCTCCGG ACAGGAACTT CCGACTGAGC 
GAGCACCGCC AGGCCCTGGC AGCCTCCCAG CACCGGGCCC CTGCACCGGC CCCCGTCGGC 
CCGGAGCCCG GCGCCGGCCC GGGCTCCGGC CCGTGGGGTG AAGAGCGCCG GGCGGAGCGC 
AGTTCCCGGG GTTGGGACCG GGCGAGCGGT CGCAGCGACG CCTCCGGGTC TGACGCGCTC 
CGACGGCAAG ATCCCGAAGC CGAGGCTCAC CCGGTTCCGG CACCCGCTCG GAGCAGCGGC 
GAGCCGGCCC AGAACGGCGA AGGCGAAGCC GTAGGCACGT CCCGGGCGGA TCCCAGGGAC 
GAGAAGCTAG CCCTGTACCT GGCCGAGGTG GAGAGGCAGG ACAAGTACCT GAGGCAGAGA 
AACAAGTACC GATTCCACAT CATCCCCGAC GGCAACTGCC TCTACCGAGC TGTCAGCAAG 
ACTGTGTACG GGGACCAGAG CCTGCACCGG GAGCTGAGGG AGCAGACCGT GCACTACATC 
GCGGACCACC TGGACCACTT CAGCCCACTC ATTGAGGGCG ACGTGGGGGA GTTTATTATC 
GCTGCTGCCC AAGATGGGGC GTGGGCCGGA TATCCCGAAT TGCTGGCCAT GGGGCAGATG 
CTGAATGTGA ATATACACTT AACTACTGGA GGGAGGCTGG AGAGCCCCAC CGTGTCTACC 
ATGATCCACT ATCTGGGCCC AGAGGATTCT CTACGGCCCA GTATTTGGCT CAGTTGGCTC 
AGCAATGGAC ACTATGATGC TGTTTTTGAC CACTCCTATC CTAACCCAGA GTATGACAAT 
TGGTGCAAGC AAACCCAGAT ACAGAAAAAA CGCGATGAAG AACTTGCCAA GTCCATGGCC 
ATATCCCTGT CCAAAATGTA TATTGAACAA AATGCATGCT CTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Next-generation sequencing identifies the Danforth's short tail mouse mutation as a retrotransposon insertion affecting Ptf1a expression.
PLoS genetics9(2)e1003205(2013)
Vlangos CN,Siuniak AN,Robinson D,Chinnaiyan AM,Lyons RH Jr,Cavalcoli JD,Keegan CE

A retrotransposon insertion in the 5' regulatory domain of Ptf1a results in ectopic gene expression and multiple congenital defects in Danforth's short tail mouse.
PLoS genetics9(2)e1003206(2013)
Lugani F,Arora R,Papeta N,Patel A,Zheng Z,Sterken R,Singer RA,Caridi G,Mendelsohn C,Sussel L,Papaioannou VE,Gharavi AG

Ptf1a, a bHLH transcriptional gene, defines GABAergic neuronal fates in cerebellum.
Neuron47(2)201-13(2005 Jul)
Hoshino M,Nakamura S,Mori K,Kawauchi T,Terao M,Nishimura YV,Fukuda A,Fuse T,Matsuo N,Sone M,Watanabe M,Bito H,Terashima T,Wright CV,Kawaguchi Y,Nakao K,Nabeshima Y

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Otud1 cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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FAX

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