Tsr1 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Tsr1
Entrez Gene ID	104662
Full Name	TSR1 20S rRNA accumulation
Synonyms	AU040765,AW550801,mKIAA1401
General protein information	Preferred Names TSR1 20S rRNA accumulation Names pre-rRNA-processing protein TSR1 homolog TSR1, 20S rRNA accumulation, homolog
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 11 Map Location: 11\|11 B5

mRNA and Protein(s)

mRNA	Protein	Name
NM_177325.3	NP_796299.2	pre-rRNA-processing protein TSR1 homolog

Pathways from BioSystems

Homologies

Homo sapiens (human)	TSR1	NP_060598.3
Rattus norvegicus (Norway rat)	Tsr1	XP_002727820.1
Saccharomyces cerevisiae (baker's yeast)	TSR1	NP_010223.1
Schizosaccharomyces pombe (fission yeast)	SPAC23H4.15	NP_593391.1
Canis lupus familiaris (dog)	LOC610048	XP_852531.1
Mus musculus (house mouse)	Tsr1	NP_796299.2
Caenorhabditis elegans (roundworm)	tag-151	NP_494840.1
Magnaporthe oryzae (rice blast fungus)	MGG_01087	XP_003717850.1
Arabidopsis thaliana (thale cress)	AT1G42440	NP_564480.1
Pan troglodytes (chimpanzee)	TSR1	XP_003315339.1
	TSR1	XP_001086730.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009438	XP_307850.4
Kluyveromyces lactis	KLLA0E05149g	XP_454177.1
Neurospora crassa	NCU01503	XP_956952.1
Canis lupus familiaris (dog)	TSR1	XP_548321.4
Gallus gallus (chicken)	LOC100857289	XP_004946616.1
Drosophila melanogaster (fruit fly)	CG7338	NP_649304.1
Bos taurus (cattle)	TSR1	NP_001095403.1
Danio rerio (zebrafish)	tsr1	NP_001032447.2
Eremothecium gossypii	AGOS_AER051C	NP_984911.1
Oryza sativa (rice)	Os11g0298400	NP_001067728.1

Gene Ontology
Bibliography

Related articles in PubMed

Tagging genes with cassette-exchange sites.
Cobellis G, Nicolaus G, Iovino M, Romito A, Marra E, Barbarisi M, Sardiello M, Di Giorgio FP, Iovino N, Zollo M, Ballabio A, Cortese R
Nucleic acids research33(4)e44(2005 Mar)

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Okazaki N, Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S, Saga Y, Nagase T, Ohara O, Koga H
DNA research : an international journal for rapid publication of reports on genes and genomes10(4)167-80(2003 Aug)

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.
Piao Y, Ko NT, Lim MK, Ko MS
Genome research11(9)1553-8(2001 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Tsr1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tsr1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu14739	NM_177325.3 Latest version!	Mus musculus TSR1 20S rRNA accumulation (Tsr1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Tsr1 ( NM_177325.3 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_796299.2 Mus musculus TSR1 20S rRNA accumulation (Tsr1), mRNA.

Price & Availability↑

CloneID	OMu14739
Clone ID Related Accession (Same CDS sequence)	NM_177325.3
Accession Version	NM_177325.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2412bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-03
Organism	Mus musculus(house mouse)
Product	pre-rRNA-processing protein TSR1 homolog
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CD547366.1, AK129350.1 and BF455129.1. On Mar 2, 2007 this sequence version replaced NM_177325.2. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.71841.1, AK154063.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849380, SAMN00849381 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGCGGCTC ACCGCTCCGG GCCGCTGAAG CAGCAGAATA AAGCTCATAA AGGCGGGCGG 
CATCACGGCG GTGGGTCCGC ACAACGGGAC AGCAAAGGCC GGGTAGGACC GAAAATCCTC 
TGCAAGAAGC TGAAGAGGCA GCTCAGCCGA ATAGACCAGA GGCATCGCGC CAGCCAGCTC 
CGAAAGCAAA AGAGGGAGTC GGTTCTGGCC GAGAAGAGGC AGCTGGGCAG CAAGGATGGT 
CCTCCACATC AGGTGCTGGT GGTGCCTCTG CACAGCAGGA TTTCCCTTCC AGAGGCATTT 
AAACTGCTTC AGAATGAAGA CTTGGGAACG GTGTATTTGA GTGAACGGGG AAGCACCCAG 
AGTTTTATGC TTCTGTGCCC TAGCTTGAAA CATCGATGGT TTTTCACATA TGCAAGACCA 
GGGGATCTGC ATACTCTGTT AGACATGGCT AAAGTCGCTG ATACCATTCT GTTCCTCCTG 
GACCCACTAG AAGGCTGGGA CAGTACGGGG GATTATTGCC TGTCTTGCCT TTTTGCTCAG 
GGCCTTCCCA CCTATACACT AGCTGTCCAG GGCCTTTCTG GCTTCCCACC AAAGAAACAA 
ATAGATGCCC GAAAGAAGCT AAGTAAAATG GTGGAGAAAC GCTTCCCTGA AGACAAACTT 
CTGCTCCTAG ACACGCAGCA GGAATCAGGA ATGCTACTTA GACAGTTGGC TAACCAGAAG 
CAACGGCATC TTGCTTTTCG GGATCGGCGA GCTTACTTGT TTGCCCATGT TGCTGACTTC 
GTGCCTAGTG AGGAGAGTGA CTTAGTGGGC ACCTTGAAAA TCTCAGGCTA TGTTCGTGGG 
AGGACTCTGA ATGTAAATAG CTTGCTGCAT ATCGTTGGAC ACGGTGATTT CCAAATGAAT 
CAAATAGATG CTCCTGTGGA TCCGTTCCCT TTAAATCCTA GAGTGATTAA ATCCCAGAAG 
AAACCAAACA TGGCAATGGA GGTTTGTGTT ACAGATGCTG CTCCTGACAT GGAAGAAGAC 
CTTAAGGTTC TGATGAAGGC AGACCCTGAT CACCAGGAGT CTTTACAAAC AGAGGCTATT 
CCAGATCCTA TGGAAGGAGA GCAGACCTGG CCCACTGAGG AAGAGCTGGA TGAGGCAGAT 
GACTTACTGA AGCAACGGTC CAGAGTGGTA AAGAAGGTCC CTAAAGGAAC ATCCAGTTAC 
CAGGCTGAGT GGATTCTGGA TGAAGGTGAT GAAAGTGATG GGGAAGGTGG TGAATATGAT 
GATATACAAC ACGAAGGTTT CATGGAAGAG GAGTCTCAGG ATGGGAGTGG TGAGGAAGAG 
GAGGAAGAAT GTGAAACTAT GACTCTCGGG GAGTCTGTGC GTGACGATCT ATACGATGAG 
AAAGTAGATG CAGAGGACGA GGAGAGAATG TTGGAGAAAT ATAAACAAGA AAGACTGGAA 
GAAATGTTTC CAGATGAAAT GGATACCCCC CGTGATGTAG CTGCTAGAAT TCGATTTCAG 
AAATATAGAG GCCTCAAGAG TTTCCGGACA TCTCCTTGGG ATCCTAAAGA AAACCTTCCT 
AGAGATTATG CTCGGATATT TCAGTTTCAG AATTTTGTTA ATACTAGAAA AAGAATTTTT 
AAAGAGATTG AGGAAAAAGA AGCTGAAGGA GCTGAGGTGG GCTGGTATGT CACACTCCAT 
GTTTCTGATG TCCCTGTCTC AGTGGTTGAG TATTTCAGGC AAGGAGCGCC CTTGATTGCA 
TTTTCTTTGC TACCTTATGA ACAGAAGATG TCTGTATTGA ACATGGTGGT GAGCCGGAAC 
CCTGGCAACA CGGAACCTGT GAAGGCGAAA GAAGAATTGA TCTTCCACTG TGGGTTCAGG 
CGCTTCCGAG CTTCGCCTTT GTTCTCTCAG CACACAGCAG CTGATAAACA TAAATTTCAA 
AGATTCCTGA CTGCTGATGC TGCCTTCGTG GTGACAGTGT TTGCGCCAAT CACGTTCCCT 
CCTGCATCTG TGCTGCTTTT CAAGCAGAGA AGAAATGGAA TGCACAGCCT CATCGCTACA 
GGCCATCTGT TTTCAGTGGA CCCAGACAGG ATGGTCATAA AGAGAGTGGT TCTAAGTGGT 
CATCCTTTTA AAATATTTAC CAAGATGGCA GTAGTGCGGT ACATGTTCTT CAACAGAGAG 
GATGTGATGT GGTTTAAGCC TGTGGAACTG AGAACCAAGT GGGGCCGCCG GGGACATATC 
AAAGAGCCTC TAGGTACCCA TGGCCATATG AAGTGCAGTT TTGATGGGAA GCTGAAATCT 
CAGGACACAG TATTAATGAA TCTCTATAAG CGAGTATTTC CCAAGTGGAC TTATGACCCA 
TATGTACCAG AGCCAGTACC TTGGGTTAAA AGTGACATCT CTTCAACAGT GTCTGAAGTA 
GACATGGAGT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_796299.2
CDS	40..2451
Translation	MAAHRSGPLKQQNKAHKGGRHHGGGSAQRDSKGRVGPKILCKKLKRQLSRIDQRHRASQLRKQKRESVLAEKRQLGSKDGPPHQVLVVPLHSRISLPEAFKLLQNEDLGTVYLSERGSTQSFMLLCPSLKHRWFFTYARPGDLHTLLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAVQGLSGFPPKKQIDARKKLSKMVEKRFPEDKLLLLDTQQESGMLLRQLANQKQRHLAFRDRRAYLFAHVADFVPSEESDLVGTLKISGYVRGRTLNVNSLLHIVGHGDFQMNQIDAPVDPFPLNPRVIKSQKKPNMAMEVCVTDAAPDMEEDLKVLMKADPDHQESLQTEAIPDPMEGEQTWPTEEELDEADDLLKQRSRVVKKVPKGTSSYQAEWILDEGDESDGEGGEYDDIQHEGFMEEESQDGSGEEEEEECETMTLGESVRDDLYDEKVDAEDEERMLEKYKQERLEEMFPDEMDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFVNTRKRIFKEIEEKEAEGAEVGWYVTLHVSDVPVSVVEYFRQGAPLIAFSLLPYEQKMSVLNMVVSRNPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADAAFVVTVFAPITFPPASVLLFKQRRNGMHSLIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYDPYVPEPVPWVKSDISSTVSEVDME

Target ORF information:

RefSeq Version	NM_177325.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus TSR1 20S rRNA accumulation (Tsr1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_177325.3

ORF Insert Sequence:

ATGGCGGCTC ACCGCTCCGG GCCGCTGAAG CAGCAGAATA AAGCTCATAA AGGCGGGCGG 
CATCACGGCG GTGGGTCCGC ACAACGGGAC AGCAAAGGCC GGGTAGGACC GAAAATCCTC 
TGCAAGAAGC TGAAGAGGCA GCTCAGCCGA ATAGACCAGA GGCATCGCGC CAGCCAGCTC 
CGAAAGCAAA AGAGGGAGTC GGTTCTGGCC GAGAAGAGGC AGCTGGGCAG CAAGGATGGT 
CCTCCACATC AGGTGCTGGT GGTGCCTCTG CACAGCAGGA TTTCCCTTCC AGAGGCATTT 
AAACTGCTTC AGAATGAAGA CTTGGGAACG GTGTATTTGA GTGAACGGGG AAGCACCCAG 
AGTTTTATGC TTCTGTGCCC TAGCTTGAAA CATCGATGGT TTTTCACATA TGCAAGACCA 
GGGGATCTGC ATACTCTGTT AGACATGGCT AAAGTCGCTG ATACCATTCT GTTCCTCCTG 
GACCCACTAG AAGGCTGGGA CAGTACGGGG GATTATTGCC TGTCTTGCCT TTTTGCTCAG 
GGCCTTCCCA CCTATACACT AGCTGTCCAG GGCCTTTCTG GCTTCCCACC AAAGAAACAA 
ATAGATGCCC GAAAGAAGCT AAGTAAAATG GTGGAGAAAC GCTTCCCTGA AGACAAACTT 
CTGCTCCTAG ACACGCAGCA GGAATCAGGA ATGCTACTTA GACAGTTGGC TAACCAGAAG 
CAACGGCATC TTGCTTTTCG GGATCGGCGA GCTTACTTGT TTGCCCATGT TGCTGACTTC 
GTGCCTAGTG AGGAGAGTGA CTTAGTGGGC ACCTTGAAAA TCTCAGGCTA TGTTCGTGGG 
AGGACTCTGA ATGTAAATAG CTTGCTGCAT ATCGTTGGAC ACGGTGATTT CCAAATGAAT 
CAAATAGATG CTCCTGTGGA TCCGTTCCCT TTAAATCCTA GAGTGATTAA ATCCCAGAAG 
AAACCAAACA TGGCAATGGA GGTTTGTGTT ACAGATGCTG CTCCTGACAT GGAAGAAGAC 
CTTAAGGTTC TGATGAAGGC AGACCCTGAT CACCAGGAGT CTTTACAAAC AGAGGCTATT 
CCAGATCCTA TGGAAGGAGA GCAGACCTGG CCCACTGAGG AAGAGCTGGA TGAGGCAGAT 
GACTTACTGA AGCAACGGTC CAGAGTGGTA AAGAAGGTCC CTAAAGGAAC ATCCAGTTAC 
CAGGCTGAGT GGATTCTGGA TGAAGGTGAT GAAAGTGATG GGGAAGGTGG TGAATATGAT 
GATATACAAC ACGAAGGTTT CATGGAAGAG GAGTCTCAGG ATGGGAGTGG TGAGGAAGAG 
GAGGAAGAAT GTGAAACTAT GACTCTCGGG GAGTCTGTGC GTGACGATCT ATACGATGAG 
AAAGTAGATG CAGAGGACGA GGAGAGAATG TTGGAGAAAT ATAAACAAGA AAGACTGGAA 
GAAATGTTTC CAGATGAAAT GGATACCCCC CGTGATGTAG CTGCTAGAAT TCGATTTCAG 
AAATATAGAG GCCTCAAGAG TTTCCGGACA TCTCCTTGGG ATCCTAAAGA AAACCTTCCT 
AGAGATTATG CTCGGATATT TCAGTTTCAG AATTTTGTTA ATACTAGAAA AAGAATTTTT 
AAAGAGATTG AGGAAAAAGA AGCTGAAGGA GCTGAGGTGG GCTGGTATGT CACACTCCAT 
GTTTCTGATG TCCCTGTCTC AGTGGTTGAG TATTTCAGGC AAGGAGCGCC CTTGATTGCA 
TTTTCTTTGC TACCTTATGA ACAGAAGATG TCTGTATTGA ACATGGTGGT GAGCCGGAAC 
CCTGGCAACA CGGAACCTGT GAAGGCGAAA GAAGAATTGA TCTTCCACTG TGGGTTCAGG 
CGCTTCCGAG CTTCGCCTTT GTTCTCTCAG CACACAGCAG CTGATAAACA TAAATTTCAA 
AGATTCCTGA CTGCTGATGC TGCCTTCGTG GTGACAGTGT TTGCGCCAAT CACGTTCCCT 
CCTGCATCTG TGCTGCTTTT CAAGCAGAGA AGAAATGGAA TGCACAGCCT CATCGCTACA 
GGCCATCTGT TTTCAGTGGA CCCAGACAGG ATGGTCATAA AGAGAGTGGT TCTAAGTGGT 
CATCCTTTTA AAATATTTAC CAAGATGGCA GTAGTGCGGT ACATGTTCTT CAACAGAGAG 
GATGTGATGT GGTTTAAGCC TGTGGAACTG AGAACCAAGT GGGGCCGCCG GGGACATATC 
AAAGAGCCTC TAGGTACCCA TGGCCATATG AAGTGCAGTT TTGATGGGAA GCTGAAATCT 
CAGGACACAG TATTAATGAA TCTCTATAAG CGAGTATTTC CCAAGTGGAC TTATGACCCA 
TATGTACCAG AGCCAGTACC TTGGGTTAAA AGTGACATCT CTTCAACAGT GTCTGAAGTA 
GACATGGAGT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Tagging genes with cassette-exchange sites.
Nucleic acids research33(4)e44(2005 Mar)
Cobellis G,Nicolaus G,Iovino M,Romito A,Marra E,Barbarisi M,Sardiello M,Di Giorgio FP,Iovino N,Zollo M,Ballabio A,Cortese R

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
DNA research : an international journal for rapid publication of reports on genes and genomes10(4)167-80(2003 Aug)
Okazaki N,Kikuno R,Ohara R,Inamoto S,Koseki H,Hiraoka S,Saga Y,Nagase T,Ohara O,Koga H

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Nucleic acids research31(1)278-81(2003 Jan)
Stryke D,Kawamoto M,Huang CC,Johns SJ,King LA,Harper CA,Meng EC,Lee RE,Yee A,L'Italien L,Chuang PT,Young SG,Skarnes WC,Babbitt PC,Ferrin TE

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.
Genome research11(9)1553-8(2001 Sep)
Piao Y,Ko NT,Lim MK,Ko MS