MTR_5g007710 cDNA ORF clone, Medicago truncatula(barrel medic)

The following MTR_5g007710 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MTR_5g007710 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe180506 XM_013597891.1
Latest version!
Medicago truncatula ubiquitin-protein ligase synoviolin partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
OMe180505 XM_024784506.1
Latest version!
Medicago truncatula ERAD-associated E3 ubiquitin-protein ligase HRD1B (LOC11433721), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OMe180505 XM_003610802.3
Latest version!
Medicago truncatula ERAD-associated E3 ubiquitin-protein ligase HRD1B (LOC11433721), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
View Old Accession Versions >>
OMe180505 XM_003610802.2 Medicago truncatula ubiquitin-protein ligase synoviolin partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OMe180506
    Clone ID Related Accession (Same CDS sequence) XM_013597891.1
    Accession Version XM_013597891.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1269bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product ubiquitin-protein ligase synoviolin
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016411). ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGATGAGGT TGAAGACATA TGCTGGTCTT AGTTTGATGG CAACTTTGGC TATTGCATAT 
    CATGCATTTA ACAGTAGAGG CCAGTTTTAT CCGGCAATGG TGTATCTTTC AACTTCCAAG
    ATCAGTTTGG TGCTTCTTCT TAACATGGGT TTGGTTATTA TGTGTGTTCT GTGGCAACTA
    ACTAAAAAGG TATTCTTGGG TAATCTTCGA GAGGCTGAGG TTGAGAGGCT TAATGAGCAA
    TCATGGAGGG AGGTTATGGA GATCCTCTTT GCGATTACTA TTTTTAGGCA GGATTTCTCG
    GTTACATTCC TTGCGATGGT CACGGCATTG TTGTTAATTA AGGCTTTGCA TTGGTTGGCT
    CAAAAGAGAG TCGAGTACAT CGAGACCACT CCTACAGTGA CCACATTATC CCATATTCGA
    ATTGTATCTT TTATGGGTTT CCTTCTTCTT CTTGATAGCA TTTTCTTATA CAGCTCTTTG
    AAGCATTTGA TACAAACATG GCAGGCTTCC GTTTCACTAT TCTTTGCTTT CGAGTACATG
    ATATTAGCAA CAACAACAGT ATCGATTTTT GTAAAATATG TTTTCTATGT CACTGACATA
    CTTATGGAGG GACAGTGGGA TAAGAAACCA GTCTTCACAT TTTACCTGGA CCTTGTTAGG
    GACTTGCTGC ACTTGTCCAT GTATCTGTGC TTCTTCTTTG TTATTTTTGT AAACTATGGA
    ATTCCCTTGC ACCTAATACG GGAGCTATAC GAGACATTTA GGAACTTCAA AGCTCGCATT
    GCAGATTACA TTAGATATCG TAAGATCACT TCAAATATGA ATGATCGCTT TCCAGAAGCA
    ACCTCCGAAG AGCTCAATGC TAGTGATGCA ACTTGTATTA TCTGTCGTGA AGAGATGACT
    GCAGCCAAGA AACTGATATG CGGACATCTT TTTCATGTTC ATTGCCTTCG ATCATGGCTA
    GAGCGACAAC ACACTTGCCC TACTTGCAGA GCCTTGGTTG TACCCCCAGA AAATGGAACA
    ACTGTTGCTG GAGGTCAGCA AGGATCACAA TCAGATGGTC ATCAACAGGG CACTGGAAGT
    ACAGGTCAAA CCGAGCTTGG TAATGGGGTG GCAACTGATA GTTTGAGTCG GCATCAAGCT
    AGACTCCAAG CAGCTGCTGC TGCAGCTTCA ATATATGAGA AGTCTTATGT TTATCCTCCC
    GCAACTTCTT TTGTACGGTA CGGCGTTCAT GCTCGGACGT TGGGCCCTTT TGGATTTGCT
    TCTTTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013453345.1
    CDS1..1269
    Translation

    Target ORF information:

    RefSeq Version XM_013597891.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula ubiquitin-protein ligase synoviolin partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_013597891.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGATGAGGT TGAAGACATA TGCTGGTCTT AGTTTGATGG CAACTTTGGC TATTGCATAT 
    CATGCATTTA ACAGTAGAGG CCAGTTTTAT CCGGCAATGG TGTATCTTTC AACTTCCAAG
    ATCAGTTTGG TGCTTCTTCT TAACATGGGT TTGGTTATTA TGTGTGTTCT GTGGCAACTA
    ACTAAAAAGG TATTCTTGGG TAATCTTCGA GAGGCTGAGG TTGAGAGGCT TAATGAGCAA
    TCATGGAGGG AGGTTATGGA GATCCTCTTT GCGATTACTA TTTTTAGGCA GGATTTCTCG
    GTTACATTCC TTGCGATGGT CACGGCATTG TTGTTAATTA AGGCTTTGCA TTGGTTGGCT
    CAAAAGAGAG TCGAGTACAT CGAGACCACT CCTACAGTGA CCACATTATC CCATATTCGA
    ATTGTATCTT TTATGGGTTT CCTTCTTCTT CTTGATAGCA TTTTCTTATA CAGCTCTTTG
    AAGCATTTGA TACAAACATG GCAGGCTTCC GTTTCACTAT TCTTTGCTTT CGAGTACATG
    ATATTAGCAA CAACAACAGT ATCGATTTTT GTAAAATATG TTTTCTATGT CACTGACATA
    CTTATGGAGG GACAGTGGGA TAAGAAACCA GTCTTCACAT TTTACCTGGA CCTTGTTAGG
    GACTTGCTGC ACTTGTCCAT GTATCTGTGC TTCTTCTTTG TTATTTTTGT AAACTATGGA
    ATTCCCTTGC ACCTAATACG GGAGCTATAC GAGACATTTA GGAACTTCAA AGCTCGCATT
    GCAGATTACA TTAGATATCG TAAGATCACT TCAAATATGA ATGATCGCTT TCCAGAAGCA
    ACCTCCGAAG AGCTCAATGC TAGTGATGCA ACTTGTATTA TCTGTCGTGA AGAGATGACT
    GCAGCCAAGA AACTGATATG CGGACATCTT TTTCATGTTC ATTGCCTTCG ATCATGGCTA
    GAGCGACAAC ACACTTGCCC TACTTGCAGA GCCTTGGTTG TACCCCCAGA AAATGGAACA
    ACTGTTGCTG GAGGTCAGCA AGGATCACAA TCAGATGGTC ATCAACAGGG CACTGGAAGT
    ACAGGTCAAA CCGAGCTTGG TAATGGGGTG GCAACTGATA GTTTGAGTCG GCATCAAGCT
    AGACTCCAAG CAGCTGCTGC TGCAGCTTCA ATATATGAGA AGTCTTATGT TTATCCTCCC
    GCAACTTCTT TTGTACGGTA CGGCGTTCAT GCTCGGACGT TGGGCCCTTT TGGATTTGCT
    TCTTTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMe180505
    Clone ID Related Accession (Same CDS sequence) XM_003610802.3 , XM_003610802.2 , XM_024784506.1
    Accession Version XM_003610802.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1620bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product ERAD-associated E3 ubiquitin-protein ligase HRD1B
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016411.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_003610802.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGAGGT TGAAGACATA TGCTGGTCTT AGTTTGATGG CAACTTTGGC TATTGCATAT 
    CATGCATTTA ACAGTAGAGG CCAGTTTTAT CCGGCAATGG TGTATCTTTC AACTTCCAAG
    ATCAGTTTGG TGCTTCTTCT TAACATGGGT TTGGTTATTA TGTGTGTTCT GTGGCAACTA
    ACTAAAAAGG TATTCTTGGG TAATCTTCGA GAGGCTGAGG TTGAGAGGCT TAATGAGCAA
    TCATGGAGGG AGGTTATGGA GATCCTCTTT GCGATTACTA TTTTTAGGCA GGATTTCTCG
    GTTACATTCC TTGCGATGGT CACGGCATTG TTGTTAATTA AGGCTTTGCA TTGGTTGGCT
    CAAAAGAGAG TCGAGTACAT CGAGACCACT CCTACAGTGA CCACATTATC CCATATTCGA
    ATTGTATCTT TTATGGGTTT CCTTCTTCTT CTTGATAGCA TTTTCTTATA CAGCTCTTTG
    AAGCATTTGA TACAAACATG GCAGGCTTCC GTTTCACTAT TCTTTGCTTT CGAGTACATG
    ATATTAGCAA CAACAACAGT ATCGATTTTT GTAAAATATG TTTTCTATGT CACTGACATA
    CTTATGGAGG GACAGTGGGA TAAGAAACCA GTCTTCACAT TTTACCTGGA CCTTGTTAGG
    GACTTGCTGC ACTTGTCCAT GTATCTGTGC TTCTTCTTTG TTATTTTTGT AAACTATGGA
    ATTCCCTTGC ACCTAATACG GGAGCTATAC GAGACATTTA GGAACTTCAA AGCTCGCATT
    GCAGATTACA TTAGATATCG TAAGATCACT TCAAATATGA ATGATCGCTT TCCAGAAGCA
    ACCTCCGAAG AGCTCAATGC TAGTGATGCA ACTTGTATTA TCTGTCGTGA AGAGATGACT
    GCAGCCAAGA AACTGATATG CGGACATCTT TTTCATGTTC ATTGCCTTCG ATCATGGCTA
    GAGCGACAAC ACACTTGCCC TACTTGCAGA GCCTTGGTTG TACCCCCAGA AAATGGAACA
    ACTGTTGCTG GAGGTCAGCA AGGATCACAA TCAGATGGTC ATCAACAGGG CACTGGAAGT
    ACAGGTCAAA CCGAGCTTGG TAATGGGGTG GCAACTGATA GTTTGAGTCG GCATCAAGCT
    AGACTCCAAG CAGCTGCTGC TGCAGCTTCA ATATATGAGA AGTCTTATGT TTATCCTCCC
    GCAACTTCTT TTGTACGATC TCCTGGGTAC ACTAATTATC CCCCGGTTGC TGCTGAATCT
    ACCAGTGTTG ATCTTAATGG AGAACAAGCT TCCAGTCAAC AAGCACAAAA TCAGTTTCAT
    ATCCCTGGTG GGCCAATAAA TGCACCCTTT CCTTCAACAG GACATTTCCA TTATCTTCCT
    TCCCAACCAT ACATGGCCCC TTTGAATTAT GGAGAGGGGT TTGAAAATGA TCCAAATATC
    TCAAAATCTC AGCTGGAAGC TCATAAAAAA ATTCTACAAC AACAGATTGA GATTCTGCAA
    AATCAGCTAC AGAATCTGCA GAGCACAGAG GCTAAGAGAA GTGTAGATGA CGGCGCACCA
    TCATCAGAAA GCAAAGGCAA GCTTAGCTCT TCCTCGGAGA TTCAAGATGG AAAAGCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003610850.1
    CDS192..1811
    Translation

    Target ORF information:

    RefSeq Version XM_003610802.3
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula ERAD-associated E3 ubiquitin-protein ligase HRD1B (LOC11433721), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_003610802.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGAGGT TGAAGACATA TGCTGGTCTT AGTTTGATGG CAACTTTGGC TATTGCATAT 
    CATGCATTTA ACAGTAGAGG CCAGTTTTAT CCGGCAATGG TGTATCTTTC AACTTCCAAG
    ATCAGTTTGG TGCTTCTTCT TAACATGGGT TTGGTTATTA TGTGTGTTCT GTGGCAACTA
    ACTAAAAAGG TATTCTTGGG TAATCTTCGA GAGGCTGAGG TTGAGAGGCT TAATGAGCAA
    TCATGGAGGG AGGTTATGGA GATCCTCTTT GCGATTACTA TTTTTAGGCA GGATTTCTCG
    GTTACATTCC TTGCGATGGT CACGGCATTG TTGTTAATTA AGGCTTTGCA TTGGTTGGCT
    CAAAAGAGAG TCGAGTACAT CGAGACCACT CCTACAGTGA CCACATTATC CCATATTCGA
    ATTGTATCTT TTATGGGTTT CCTTCTTCTT CTTGATAGCA TTTTCTTATA CAGCTCTTTG
    AAGCATTTGA TACAAACATG GCAGGCTTCC GTTTCACTAT TCTTTGCTTT CGAGTACATG
    ATATTAGCAA CAACAACAGT ATCGATTTTT GTAAAATATG TTTTCTATGT CACTGACATA
    CTTATGGAGG GACAGTGGGA TAAGAAACCA GTCTTCACAT TTTACCTGGA CCTTGTTAGG
    GACTTGCTGC ACTTGTCCAT GTATCTGTGC TTCTTCTTTG TTATTTTTGT AAACTATGGA
    ATTCCCTTGC ACCTAATACG GGAGCTATAC GAGACATTTA GGAACTTCAA AGCTCGCATT
    GCAGATTACA TTAGATATCG TAAGATCACT TCAAATATGA ATGATCGCTT TCCAGAAGCA
    ACCTCCGAAG AGCTCAATGC TAGTGATGCA ACTTGTATTA TCTGTCGTGA AGAGATGACT
    GCAGCCAAGA AACTGATATG CGGACATCTT TTTCATGTTC ATTGCCTTCG ATCATGGCTA
    GAGCGACAAC ACACTTGCCC TACTTGCAGA GCCTTGGTTG TACCCCCAGA AAATGGAACA
    ACTGTTGCTG GAGGTCAGCA AGGATCACAA TCAGATGGTC ATCAACAGGG CACTGGAAGT
    ACAGGTCAAA CCGAGCTTGG TAATGGGGTG GCAACTGATA GTTTGAGTCG GCATCAAGCT
    AGACTCCAAG CAGCTGCTGC TGCAGCTTCA ATATATGAGA AGTCTTATGT TTATCCTCCC
    GCAACTTCTT TTGTACGATC TCCTGGGTAC ACTAATTATC CCCCGGTTGC TGCTGAATCT
    ACCAGTGTTG ATCTTAATGG AGAACAAGCT TCCAGTCAAC AAGCACAAAA TCAGTTTCAT
    ATCCCTGGTG GGCCAATAAA TGCACCCTTT CCTTCAACAG GACATTTCCA TTATCTTCCT
    TCCCAACCAT ACATGGCCCC TTTGAATTAT GGAGAGGGGT TTGAAAATGA TCCAAATATC
    TCAAAATCTC AGCTGGAAGC TCATAAAAAA ATTCTACAAC AACAGATTGA GATTCTGCAA
    AATCAGCTAC AGAATCTGCA GAGCACAGAG GCTAAGAGAA GTGTAGATGA CGGCGCACCA
    TCATCAGAAA GCAAAGGCAA GCTTAGCTCT TCCTCGGAGA TTCAAGATGG AAAAGCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMe180505
    Clone ID Related Accession (Same CDS sequence) XM_003610802.3 , XM_003610802.2 , XM_024784506.1
    Accession Version XM_003610802.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1620bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product ubiquitin-protein ligase synoviolin
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016411). On Aug 25, 2015 this sequence version replaced XM_003610802.1. ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGAGGT TGAAGACATA TGCTGGTCTT AGTTTGATGG CAACTTTGGC TATTGCATAT 
    CATGCATTTA ACAGTAGAGG CCAGTTTTAT CCGGCAATGG TGTATCTTTC AACTTCCAAG
    ATCAGTTTGG TGCTTCTTCT TAACATGGGT TTGGTTATTA TGTGTGTTCT GTGGCAACTA
    ACTAAAAAGG TATTCTTGGG TAATCTTCGA GAGGCTGAGG TTGAGAGGCT TAATGAGCAA
    TCATGGAGGG AGGTTATGGA GATCCTCTTT GCGATTACTA TTTTTAGGCA GGATTTCTCG
    GTTACATTCC TTGCGATGGT CACGGCATTG TTGTTAATTA AGGCTTTGCA TTGGTTGGCT
    CAAAAGAGAG TCGAGTACAT CGAGACCACT CCTACAGTGA CCACATTATC CCATATTCGA
    ATTGTATCTT TTATGGGTTT CCTTCTTCTT CTTGATAGCA TTTTCTTATA CAGCTCTTTG
    AAGCATTTGA TACAAACATG GCAGGCTTCC GTTTCACTAT TCTTTGCTTT CGAGTACATG
    ATATTAGCAA CAACAACAGT ATCGATTTTT GTAAAATATG TTTTCTATGT CACTGACATA
    CTTATGGAGG GACAGTGGGA TAAGAAACCA GTCTTCACAT TTTACCTGGA CCTTGTTAGG
    GACTTGCTGC ACTTGTCCAT GTATCTGTGC TTCTTCTTTG TTATTTTTGT AAACTATGGA
    ATTCCCTTGC ACCTAATACG GGAGCTATAC GAGACATTTA GGAACTTCAA AGCTCGCATT
    GCAGATTACA TTAGATATCG TAAGATCACT TCAAATATGA ATGATCGCTT TCCAGAAGCA
    ACCTCCGAAG AGCTCAATGC TAGTGATGCA ACTTGTATTA TCTGTCGTGA AGAGATGACT
    GCAGCCAAGA AACTGATATG CGGACATCTT TTTCATGTTC ATTGCCTTCG ATCATGGCTA
    GAGCGACAAC ACACTTGCCC TACTTGCAGA GCCTTGGTTG TACCCCCAGA AAATGGAACA
    ACTGTTGCTG GAGGTCAGCA AGGATCACAA TCAGATGGTC ATCAACAGGG CACTGGAAGT
    ACAGGTCAAA CCGAGCTTGG TAATGGGGTG GCAACTGATA GTTTGAGTCG GCATCAAGCT
    AGACTCCAAG CAGCTGCTGC TGCAGCTTCA ATATATGAGA AGTCTTATGT TTATCCTCCC
    GCAACTTCTT TTGTACGATC TCCTGGGTAC ACTAATTATC CCCCGGTTGC TGCTGAATCT
    ACCAGTGTTG ATCTTAATGG AGAACAAGCT TCCAGTCAAC AAGCACAAAA TCAGTTTCAT
    ATCCCTGGTG GGCCAATAAA TGCACCCTTT CCTTCAACAG GACATTTCCA TTATCTTCCT
    TCCCAACCAT ACATGGCCCC TTTGAATTAT GGAGAGGGGT TTGAAAATGA TCCAAATATC
    TCAAAATCTC AGCTGGAAGC TCATAAAAAA ATTCTACAAC AACAGATTGA GATTCTGCAA
    AATCAGCTAC AGAATCTGCA GAGCACAGAG GCTAAGAGAA GTGTAGATGA CGGCGCACCA
    TCATCAGAAA GCAAAGGCAA GCTTAGCTCT TCCTCGGAGA TTCAAGATGG AAAAGCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003610850.1
    CDS1..1620
    Translation

    Target ORF information:

    RefSeq Version XM_003610802.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula ubiquitin-protein ligase synoviolin partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_003610802.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGAGGT TGAAGACATA TGCTGGTCTT AGTTTGATGG CAACTTTGGC TATTGCATAT 
    CATGCATTTA ACAGTAGAGG CCAGTTTTAT CCGGCAATGG TGTATCTTTC AACTTCCAAG
    ATCAGTTTGG TGCTTCTTCT TAACATGGGT TTGGTTATTA TGTGTGTTCT GTGGCAACTA
    ACTAAAAAGG TATTCTTGGG TAATCTTCGA GAGGCTGAGG TTGAGAGGCT TAATGAGCAA
    TCATGGAGGG AGGTTATGGA GATCCTCTTT GCGATTACTA TTTTTAGGCA GGATTTCTCG
    GTTACATTCC TTGCGATGGT CACGGCATTG TTGTTAATTA AGGCTTTGCA TTGGTTGGCT
    CAAAAGAGAG TCGAGTACAT CGAGACCACT CCTACAGTGA CCACATTATC CCATATTCGA
    ATTGTATCTT TTATGGGTTT CCTTCTTCTT CTTGATAGCA TTTTCTTATA CAGCTCTTTG
    AAGCATTTGA TACAAACATG GCAGGCTTCC GTTTCACTAT TCTTTGCTTT CGAGTACATG
    ATATTAGCAA CAACAACAGT ATCGATTTTT GTAAAATATG TTTTCTATGT CACTGACATA
    CTTATGGAGG GACAGTGGGA TAAGAAACCA GTCTTCACAT TTTACCTGGA CCTTGTTAGG
    GACTTGCTGC ACTTGTCCAT GTATCTGTGC TTCTTCTTTG TTATTTTTGT AAACTATGGA
    ATTCCCTTGC ACCTAATACG GGAGCTATAC GAGACATTTA GGAACTTCAA AGCTCGCATT
    GCAGATTACA TTAGATATCG TAAGATCACT TCAAATATGA ATGATCGCTT TCCAGAAGCA
    ACCTCCGAAG AGCTCAATGC TAGTGATGCA ACTTGTATTA TCTGTCGTGA AGAGATGACT
    GCAGCCAAGA AACTGATATG CGGACATCTT TTTCATGTTC ATTGCCTTCG ATCATGGCTA
    GAGCGACAAC ACACTTGCCC TACTTGCAGA GCCTTGGTTG TACCCCCAGA AAATGGAACA
    ACTGTTGCTG GAGGTCAGCA AGGATCACAA TCAGATGGTC ATCAACAGGG CACTGGAAGT
    ACAGGTCAAA CCGAGCTTGG TAATGGGGTG GCAACTGATA GTTTGAGTCG GCATCAAGCT
    AGACTCCAAG CAGCTGCTGC TGCAGCTTCA ATATATGAGA AGTCTTATGT TTATCCTCCC
    GCAACTTCTT TTGTACGATC TCCTGGGTAC ACTAATTATC CCCCGGTTGC TGCTGAATCT
    ACCAGTGTTG ATCTTAATGG AGAACAAGCT TCCAGTCAAC AAGCACAAAA TCAGTTTCAT
    ATCCCTGGTG GGCCAATAAA TGCACCCTTT CCTTCAACAG GACATTTCCA TTATCTTCCT
    TCCCAACCAT ACATGGCCCC TTTGAATTAT GGAGAGGGGT TTGAAAATGA TCCAAATATC
    TCAAAATCTC AGCTGGAAGC TCATAAAAAA ATTCTACAAC AACAGATTGA GATTCTGCAA
    AATCAGCTAC AGAATCTGCA GAGCACAGAG GCTAAGAGAA GTGTAGATGA CGGCGCACCA
    TCATCAGAAA GCAAAGGCAA GCTTAGCTCT TCCTCGGAGA TTCAAGATGG AAAAGCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMe180505
    Clone ID Related Accession (Same CDS sequence) XM_003610802.3 , XM_003610802.2 , XM_024784506.1
    Accession Version XM_024784506.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1620bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product ERAD-associated E3 ubiquitin-protein ligase HRD1B
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016411.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGAGGT TGAAGACATA TGCTGGTCTT AGTTTGATGG CAACTTTGGC TATTGCATAT 
    CATGCATTTA ACAGTAGAGG CCAGTTTTAT CCGGCAATGG TGTATCTTTC AACTTCCAAG
    ATCAGTTTGG TGCTTCTTCT TAACATGGGT TTGGTTATTA TGTGTGTTCT GTGGCAACTA
    ACTAAAAAGG TATTCTTGGG TAATCTTCGA GAGGCTGAGG TTGAGAGGCT TAATGAGCAA
    TCATGGAGGG AGGTTATGGA GATCCTCTTT GCGATTACTA TTTTTAGGCA GGATTTCTCG
    GTTACATTCC TTGCGATGGT CACGGCATTG TTGTTAATTA AGGCTTTGCA TTGGTTGGCT
    CAAAAGAGAG TCGAGTACAT CGAGACCACT CCTACAGTGA CCACATTATC CCATATTCGA
    ATTGTATCTT TTATGGGTTT CCTTCTTCTT CTTGATAGCA TTTTCTTATA CAGCTCTTTG
    AAGCATTTGA TACAAACATG GCAGGCTTCC GTTTCACTAT TCTTTGCTTT CGAGTACATG
    ATATTAGCAA CAACAACAGT ATCGATTTTT GTAAAATATG TTTTCTATGT CACTGACATA
    CTTATGGAGG GACAGTGGGA TAAGAAACCA GTCTTCACAT TTTACCTGGA CCTTGTTAGG
    GACTTGCTGC ACTTGTCCAT GTATCTGTGC TTCTTCTTTG TTATTTTTGT AAACTATGGA
    ATTCCCTTGC ACCTAATACG GGAGCTATAC GAGACATTTA GGAACTTCAA AGCTCGCATT
    GCAGATTACA TTAGATATCG TAAGATCACT TCAAATATGA ATGATCGCTT TCCAGAAGCA
    ACCTCCGAAG AGCTCAATGC TAGTGATGCA ACTTGTATTA TCTGTCGTGA AGAGATGACT
    GCAGCCAAGA AACTGATATG CGGACATCTT TTTCATGTTC ATTGCCTTCG ATCATGGCTA
    GAGCGACAAC ACACTTGCCC TACTTGCAGA GCCTTGGTTG TACCCCCAGA AAATGGAACA
    ACTGTTGCTG GAGGTCAGCA AGGATCACAA TCAGATGGTC ATCAACAGGG CACTGGAAGT
    ACAGGTCAAA CCGAGCTTGG TAATGGGGTG GCAACTGATA GTTTGAGTCG GCATCAAGCT
    AGACTCCAAG CAGCTGCTGC TGCAGCTTCA ATATATGAGA AGTCTTATGT TTATCCTCCC
    GCAACTTCTT TTGTACGATC TCCTGGGTAC ACTAATTATC CCCCGGTTGC TGCTGAATCT
    ACCAGTGTTG ATCTTAATGG AGAACAAGCT TCCAGTCAAC AAGCACAAAA TCAGTTTCAT
    ATCCCTGGTG GGCCAATAAA TGCACCCTTT CCTTCAACAG GACATTTCCA TTATCTTCCT
    TCCCAACCAT ACATGGCCCC TTTGAATTAT GGAGAGGGGT TTGAAAATGA TCCAAATATC
    TCAAAATCTC AGCTGGAAGC TCATAAAAAA ATTCTACAAC AACAGATTGA GATTCTGCAA
    AATCAGCTAC AGAATCTGCA GAGCACAGAG GCTAAGAGAA GTGTAGATGA CGGCGCACCA
    TCATCAGAAA GCAAAGGCAA GCTTAGCTCT TCCTCGGAGA TTCAAGATGG AAAAGCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024640274.1
    CDS209..1828
    Translation

    Target ORF information:

    RefSeq Version XM_024784506.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula ERAD-associated E3 ubiquitin-protein ligase HRD1B (LOC11433721), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024784506.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGAGGT TGAAGACATA TGCTGGTCTT AGTTTGATGG CAACTTTGGC TATTGCATAT 
    CATGCATTTA ACAGTAGAGG CCAGTTTTAT CCGGCAATGG TGTATCTTTC AACTTCCAAG
    ATCAGTTTGG TGCTTCTTCT TAACATGGGT TTGGTTATTA TGTGTGTTCT GTGGCAACTA
    ACTAAAAAGG TATTCTTGGG TAATCTTCGA GAGGCTGAGG TTGAGAGGCT TAATGAGCAA
    TCATGGAGGG AGGTTATGGA GATCCTCTTT GCGATTACTA TTTTTAGGCA GGATTTCTCG
    GTTACATTCC TTGCGATGGT CACGGCATTG TTGTTAATTA AGGCTTTGCA TTGGTTGGCT
    CAAAAGAGAG TCGAGTACAT CGAGACCACT CCTACAGTGA CCACATTATC CCATATTCGA
    ATTGTATCTT TTATGGGTTT CCTTCTTCTT CTTGATAGCA TTTTCTTATA CAGCTCTTTG
    AAGCATTTGA TACAAACATG GCAGGCTTCC GTTTCACTAT TCTTTGCTTT CGAGTACATG
    ATATTAGCAA CAACAACAGT ATCGATTTTT GTAAAATATG TTTTCTATGT CACTGACATA
    CTTATGGAGG GACAGTGGGA TAAGAAACCA GTCTTCACAT TTTACCTGGA CCTTGTTAGG
    GACTTGCTGC ACTTGTCCAT GTATCTGTGC TTCTTCTTTG TTATTTTTGT AAACTATGGA
    ATTCCCTTGC ACCTAATACG GGAGCTATAC GAGACATTTA GGAACTTCAA AGCTCGCATT
    GCAGATTACA TTAGATATCG TAAGATCACT TCAAATATGA ATGATCGCTT TCCAGAAGCA
    ACCTCCGAAG AGCTCAATGC TAGTGATGCA ACTTGTATTA TCTGTCGTGA AGAGATGACT
    GCAGCCAAGA AACTGATATG CGGACATCTT TTTCATGTTC ATTGCCTTCG ATCATGGCTA
    GAGCGACAAC ACACTTGCCC TACTTGCAGA GCCTTGGTTG TACCCCCAGA AAATGGAACA
    ACTGTTGCTG GAGGTCAGCA AGGATCACAA TCAGATGGTC ATCAACAGGG CACTGGAAGT
    ACAGGTCAAA CCGAGCTTGG TAATGGGGTG GCAACTGATA GTTTGAGTCG GCATCAAGCT
    AGACTCCAAG CAGCTGCTGC TGCAGCTTCA ATATATGAGA AGTCTTATGT TTATCCTCCC
    GCAACTTCTT TTGTACGATC TCCTGGGTAC ACTAATTATC CCCCGGTTGC TGCTGAATCT
    ACCAGTGTTG ATCTTAATGG AGAACAAGCT TCCAGTCAAC AAGCACAAAA TCAGTTTCAT
    ATCCCTGGTG GGCCAATAAA TGCACCCTTT CCTTCAACAG GACATTTCCA TTATCTTCCT
    TCCCAACCAT ACATGGCCCC TTTGAATTAT GGAGAGGGGT TTGAAAATGA TCCAAATATC
    TCAAAATCTC AGCTGGAAGC TCATAAAAAA ATTCTACAAC AACAGATTGA GATTCTGCAA
    AATCAGCTAC AGAATCTGCA GAGCACAGAG GCTAAGAGAA GTGTAGATGA CGGCGCACCA
    TCATCAGAAA GCAAAGGCAA GCTTAGCTCT TCCTCGGAGA TTCAAGATGG AAAAGCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
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