Gene Symbol | MAMU-DPB |
Entrez Gene ID | 717969 |
Full Name | major histocompatibility complex, class II, DP beta |
Synonyms | Mamu-DPB1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » MAMU-DPB cDNA ORF clone
Gene Symbol | MAMU-DPB |
Entrez Gene ID | 717969 |
Full Name | major histocompatibility complex, class II, DP beta |
Synonyms | Mamu-DPB1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
NM_001134293.1 | NP_001127765.1 | major histocompatibility complex, class II, DP beta precursor |
XM_015136096.1 | XP_014991582.1 | major histocompatibility complex, class II, DP beta |
NM_001361236.1 | NP_001348165.1 | major histocompatibility complex, class II, DP beta precursor |
XM_015136096.2 | XP_014991582.2 | major histocompatibility complex, class II, DP beta |
Molecular mechanism and cellular function of MHCII ubiquitination.
Oh J, Shin JS
Immunological reviews266(1)134-44(2015 Jul)
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
The major histocompatibility complex class II alleles Mamu-DRB1*1003 and -DRB1*0306 are enriched in a cohort of simian immunodeficiency virus-infected rhesus macaque elite controllers.
Giraldo-Vela JP, Rudersdorf R, Chung C, Qi Y, Wallace LT, Bimber B, Borchardt GJ, Fisk DL, Glidden CE, Loffredo JT, Piaskowski SM, Furlott JR, Morales-Martinez JP, Wilson NA, Rehrauer WM, Lifson JD, Carrington M, Watkins DI
Journal of virology82(2)859-70(2008 Jan)
Characterization and distribution of Mhc-DPB1 alleles in chimpanzee and rhesus macaque populations.
Otting N, Doxiadis GG, Versluis L, de Groot NG, Anholts J, Verduin W, Rozemuller E, Claas F, Tilanus MG, Bontrop RE
Human immunology59(10)656-64(1998 Oct)
Allelic diversity at the Mhc-DP locus in rhesus macaques (Macaca mulatta).
Slierendregt BL, Otting N, Kenter M, Bontrop RE
Immunogenetics41(1)29-37(1995)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following MAMU-DPB gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MAMU-DPB cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb02852 | |
Clone ID Related Accession (Same CDS sequence) | NM_001134293.1 | |
Accession Version | NM_001134293.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-24 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class II, DP beta precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU363225.1. On Aug 23, 2008 this sequence version replaced XM_001115895.1. Sequence Note: allele: Mamu-DPB1*18. ##Evidence-Data-START## Transcript exon combination :: EF362435.1, EF362436.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2707846, SAMEA2707847 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATGGTTC TGCAGGTTTC TGTGGTCCCC GGGACAGTGG CTCTGACGGC ATTACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001127765.1 |
CDS | 1..777 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001134293.1 |
1 | ATGATGGTTC TGCAGGTTTC TGTGGTCCCC GGGACAGTGG CTCTGACGGC ATTACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31940 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136096.1 , NM_001361236.1 | |
Accession Version | NM_001361236.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-28 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class II, DP beta precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JSUE03030678.1. On Mar 9, 2018 this sequence version replaced NM_001134293.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: CO649112.1, CO580157.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA27160168, SAMEA4688315 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGATGGTTC TGGAGGTTTC TGCAGCCCCC GGGACAGTTG GTCTGATGGC GTTACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001348165.1 |
CDS | 57..833 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001361236.1 |
1 | ATGATGGTTC TGGAGGTTTC TGCAGCCCCC GGGACAGTTG GTCTGATGGC GTTACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31940 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136096.1 , NM_001361236.1 | |
Accession Version | XM_015136096.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class II, DP beta | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804798.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGTTC TGGAGGTTTC TGCAGCCCCC GGGACAGTTG GTCTGATGGC GTTACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014991582.1 |
CDS | 115..891 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136096.1 |
1 | ATGATGGTTC TGGAGGTTTC TGCAGCCCCC GGGACAGTTG GTCTGATGGC GTTACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb84934 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136096.2 | |
Accession Version | XM_015136096.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | major histocompatibility complex, class II, DP beta | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015136096.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGTTC TGCAGGTTTC TGGGACCCCC CAGACAGTGG GTCTGATGGC GTTACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014991582.2 |
CDS | 112..888 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136096.2 |
1 | ATGATGGTTC TGCAGGTTTC TGGGACCCCC CAGACAGTGG GTCTGATGGC GTTACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Molecular mechanism and cellular function of MHCII ubiquitination. |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
The major histocompatibility complex class II alleles Mamu-DRB1*1003 and -DRB1*0306 are enriched in a cohort of simian immunodeficiency virus-infected rhesus macaque elite controllers. |
Characterization and distribution of Mhc-DPB1 alleles in chimpanzee and rhesus macaque populations. |
Allelic diversity at the Mhc-DP locus in rhesus macaques (Macaca mulatta). |