Gene Symbol | OTX2 |
Entrez Gene ID | 698501 |
Full Name | orthodenticle homeobox 2 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » OTX2 cDNA ORF clone
Gene Symbol | OTX2 |
Entrez Gene ID | 698501 |
Full Name | orthodenticle homeobox 2 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_028850244.1 | XP_028706077.1 | homeobox protein OTX2 isoform X2 |
NM_001177645.1 | NP_001171116.1 | homeobox protein OTX2 |
XM_015143757.1 | XP_014999243.1 | homeobox protein OTX2 isoform X2 |
XM_015143755.2 | XP_014999241.1 | homeobox protein OTX2 isoform X1 |
XM_028850243.1 | XP_028706076.1 | homeobox protein OTX2 isoform X1 |
XM_015143757.2 | XP_014999243.1 | homeobox protein OTX2 isoform X2 |
XM_015143755.1 | XP_014999241.1 | homeobox protein OTX2 isoform X1 |
Bioinformatic approaches to identifying orthologs and assessing evolutionary relationships.
Vallender EJ
Methods (San Diego, Calif.)49(1)50-5(2009 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following OTX2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OTX2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb00314 | |
Clone ID Related Accession (Same CDS sequence) | NM_001177645.1 | |
Accession Version | NM_001177645.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 894bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-22 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | homeobox protein OTX2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AANU01200474.1. On Apr 23, 2010 this sequence version replaced XR_010842.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SRS214026, SRS271071 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001171116.1 |
CDS | 1..894 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001177645.1 |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb37134 | |
Clone ID Related Accession (Same CDS sequence) | XM_015143755.2 , XM_028850243.1 , XM_015143755.1 | |
Accession Version | XM_015143755.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 894bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | homeobox protein OTX2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041760.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015143755.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014999241.1 |
CDS | 296..1189 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015143755.2 |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb37134 | |
Clone ID Related Accession (Same CDS sequence) | XM_015143755.2 , XM_028850243.1 , XM_015143755.1 | |
Accession Version | XM_028850243.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 894bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | homeobox protein OTX2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041760.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028706076.1 |
CDS | 193..1086 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028850243.1 |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb37134 | |
Clone ID Related Accession (Same CDS sequence) | XM_015143755.2 , XM_028850243.1 , XM_015143755.1 | |
Accession Version | XM_015143755.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 894bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | homeobox protein OTX2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805048.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014999241.1 |
CDS | 606..1499 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015143755.1 |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb37135 | |
Clone ID Related Accession (Same CDS sequence) | XM_028850244.1 , XM_015143757.1 , XM_015143757.2 | |
Accession Version | XM_028850244.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 870bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | homeobox protein OTX2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041760.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028706077.1 |
CDS | 231..1100 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028850244.1 |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb37135 | |
Clone ID Related Accession (Same CDS sequence) | XM_028850244.1 , XM_015143757.1 , XM_015143757.2 | |
Accession Version | XM_015143757.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 870bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | homeobox protein OTX2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805048.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014999243.1 |
CDS | 604..1473 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015143757.1 |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb37135 | |
Clone ID Related Accession (Same CDS sequence) | XM_028850244.1 , XM_015143757.1 , XM_015143757.2 | |
Accession Version | XM_015143757.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 870bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | homeobox protein OTX2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041760.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015143757.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014999243.1 |
CDS | 296..1165 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015143757.2 |
1 | ATGATGTCTT ATCTTAAGCA ACCGCCTTAC GCAGTCAATG GGCTGAGTCT GACCACTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Bioinformatic approaches to identifying orthologs and assessing evolutionary relationships. |