Gene Symbol | APOBEC3G |
Entrez Gene ID | 574398 |
Full Name | apolipoprotein B mRNA editing enzyme catalytic subunit 3G |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » APOBEC3G cDNA ORF clone
Gene Symbol | APOBEC3G |
Entrez Gene ID | 574398 |
Full Name | apolipoprotein B mRNA editing enzyme catalytic subunit 3G |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
NM_001198693.2 | NP_001185622.1 | DNA dC->dU-editing enzyme APOBEC-3G |
XM_015150308.1 | XP_015005794.1 | DNA dC->dU-editing enzyme APOBEC-3G isoform X2 |
NM_001198693.1 | NP_001185622.1 | DNA dC->dU-editing enzyme APOBEC-3G |
XM_015150306.1 | XP_015005792.1 | DNA dC->dU-editing enzyme APOBEC-3G isoform X1 |
XM_015150307.1 | XP_015005793.1 | DNA dC->dU-editing enzyme APOBEC-3G isoform X1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H.
Schmitt K, Katuwal M, Wang Y, Li C, Stephens EB
Virology449140-9(2014 Jan)
T cells target APOBEC3 proteins in human immunodeficiency virus type 1-infected humans and simian immunodeficiency virus-infected Indian rhesus macaques.
Champiat S, Garrison KE, Raposo RA, Burwitz BJ, Reed J, Tandon R, York VA, Newman LP, Nimityongskul FA, Wilson NA, Almeida RR, Martin JN, Deeks SG, Rosenberg MG, Wiznia AA, Spotts GE, Pilcher CD, Hecht FM, Ostrowski MA, Sacha JB, Nixon DF
Journal of virology87(11)6073-80(2013 Jun)
APOBEC3G polymorphism as a selective barrier to cross-species transmission and emergence of pathogenic SIV and AIDS in a primate host.
Krupp A, McCarthy KR, Ooms M, Letko M, Morgan JS, Simon V, Johnson WE
PLoS pathogens9(10)e1003641(2013)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The arginine at position 14 of the SIV Vif is a critical residue for virus restriction by rhA3D, rhA3G and rhA3H.
Title: Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H.
APOBEC3F/G-specific responses in HIV-1-infected rhesus macaques are CD8+ T cell mediated.
Title: T cells target APOBEC3 proteins in human immunodeficiency virus type 1-infected humans and simian immunodeficiency virus-infected Indian rhesus macaques.
APOBEC3G polymorphism as a selective barrier to cross-species transmission and emergence of pathogenic SIV and AIDS in a primate host.
Title: APOBEC3G polymorphism as a selective barrier to cross-species transmission and emergence of pathogenic SIV and AIDS in a primate host.
Vif proteins of human and simian immunodeficiency viruses require cellular CBFbeta to degrade APOBEC3G.
Title: Vif proteins of human and simian immunodeficiency viruses require cellular CBF? to degrade APOBEC3 restriction factors.
simian immunodeficiency virus (SIV) Vif binds to and requires CBF-beta to degrade rhesus macaque APOBEC3G
Title: Vif hijacks CBF-? to degrade APOBEC3G and promote HIV-1 infection.
The following APOBEC3G gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the APOBEC3G cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb04745 | |
Clone ID Related Accession (Same CDS sequence) | NM_001198693.2 , NM_001198693.1 | |
Accession Version | NM_001198693.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1155bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-26 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3G | |
Comment | Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from QNVO02000021.1, DQ913669.1 and DQ913684.1. On May 10, 2019 this sequence version replaced NM_001198693.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record are predicted based on partial macaque transcript alignments and on full-length homologous transcript alignment with human NM_021822.3 to define the exon combination and UTR extent. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: KF020485.1, KF020484.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA4688420 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAATCCTC AAATCAGAAA CATGGTGGAG CCAATGGATC CACGCACATT CGTCTCCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001185622.1 |
CDS | 278..1432 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001198693.2 |
1 | ATGAATCCTC AAATCAGAAA CATGGTGGAG CCAATGGATC CACGCACATT CGTCTCCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb04745 | |
Clone ID Related Accession (Same CDS sequence) | NM_001198693.2 , NM_001198693.1 | |
Accession Version | NM_001198693.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1155bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-28 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3G | |
Comment | Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from JSUE03005530.1, DQ913669.1 and DQ913684.1. On Mar 16, 2011 this sequence version replaced XM_001094452.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record are predicted based on partial macaque transcript alignments and on full-length homologous transcript alignment with human NM_021822.3 to define the exon combination and UTR extent. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: JX915798.1, KF020481.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00709563, SAMN02045725 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAATCCTC AAATCAGAAA CATGGTGGAG CCAATGGATC CACGCACATT CGTCTCCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001185622.1 |
CDS | 278..1432 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001198693.1 |
1 | ATGAATCCTC AAATCAGAAA CATGGTGGAG CCAATGGATC CACGCACATT CGTCTCCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41710 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150306.1 , XM_015150307.1 | |
Accession Version | XM_015150306.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1188bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3G isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805257.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTGGAG CAATGTGGAA TTTTGTTCAC AGAGCTTCGA TGGATTTTCT AAACATGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005792.1 |
CDS | 234..1421 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150306.1 |
1 | ATGATTGGAG CAATGTGGAA TTTTGTTCAC AGAGCTTCGA TGGATTTTCT AAACATGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41710 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150306.1 , XM_015150307.1 | |
Accession Version | XM_015150307.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1188bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3G isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805257.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTGGAG CAATGTGGAA TTTTGTTCAC AGAGCTTCGA TGGATTTTCT AAACATGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005793.1 |
CDS | 221..1408 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150307.1 |
1 | ATGATTGGAG CAATGTGGAA TTTTGTTCAC AGAGCTTCGA TGGATTTTCT AAACATGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb41711 | |
Clone ID Related Accession (Same CDS sequence) | XM_015150308.1 | |
Accession Version | XM_015150308.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | DNA dC->dU-editing enzyme APOBEC-3G isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805257.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGATTCC TCCAATGGTT CCGCAAGTGG AGGCAGCTGC ATCATGACCA GGAGTACAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015005794.1 |
CDS | 317..1267 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015150308.1 |
1 | ATGAGATTCC TCCAATGGTT CCGCAAGTGG AGGCAGCTGC ATCATGACCA GGAGTACAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
Analysis of the N-terminal positively charged residues of the simian immunodeficiency virus Vif reveals a critical amino acid required for the antagonism of rhesus APOBEC3D, G, and H. |
T cells target APOBEC3 proteins in human immunodeficiency virus type 1-infected humans and simian immunodeficiency virus-infected Indian rhesus macaques. |
APOBEC3G polymorphism as a selective barrier to cross-species transmission and emergence of pathogenic SIV and AIDS in a primate host. |