Gene Symbol | PTPRZ1 |
Entrez Gene ID | 574174 |
Full Name | protein tyrosine phosphatase, receptor type Z1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » PTPRZ1 cDNA ORF clone
Gene Symbol | PTPRZ1 |
Entrez Gene ID | 574174 |
Full Name | protein tyrosine phosphatase, receptor type Z1 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
NM_001278401.1 | NP_001265330.1 | receptor-type tyrosine-protein phosphatase zeta isoform 2 precursor |
NM_001278382.1 | NP_001265311.1 | receptor-type tyrosine-protein phosphatase zeta isoform 1 precursor |
XM_015134780.1 | XP_014990266.1 | receptor-type tyrosine-protein phosphatase zeta isoform X1 |
XM_015134781.1 | XP_014990267.1 | receptor-type tyrosine-protein phosphatase zeta isoform X2 |
XM_015134781.2 | XP_014990267.2 | receptor-type tyrosine-protein phosphatase zeta isoform X2 |
XM_015134780.2 | XP_014990266.2 | receptor-type tyrosine-protein phosphatase zeta isoform X1 |
PTPRZ1 | XP_001083149.2 | |
Mus musculus (house mouse) | Ptprz1 | NP_001074775.1 |
Homo sapiens (human) | PTPRZ1 | NP_002842.2 |
Bos taurus (cattle) | PTPRZ1 | NP_001179201.1 |
Pan troglodytes (chimpanzee) | PTPRZ1 | XP_001144786.1 |
Rattus norvegicus (Norway rat) | Ptprz1 | NP_037212.2 |
Gallus gallus (chicken) | PTPRZ1 | NP_001186241.1 |
Danio rerio (zebrafish) | ptprz1b | XP_005164582.1 |
Danio rerio (zebrafish) | ca16c | XP_005163194.1 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PTPRZ1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PTPRZ1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb31092 | |
Clone ID Related Accession (Same CDS sequence) | XM_015134780.1 | |
Accession Version | XM_015134780.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4368bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | receptor-type tyrosine-protein phosphatase zeta isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804751.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014990266.1 |
CDS | 414..4781 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015134780.1 |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31093 | |
Clone ID Related Accession (Same CDS sequence) | XM_015134781.1 | |
Accession Version | XM_015134781.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4347bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | receptor-type tyrosine-protein phosphatase zeta isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804751.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014990267.1 |
CDS | 414..4760 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015134781.1 |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb81335 | |
Clone ID Related Accession (Same CDS sequence) | XM_015134780.2 | |
Accession Version | XM_015134780.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4368bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | receptor-type tyrosine-protein phosphatase zeta isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041756.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015134780.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014990266.2 |
CDS | 405..4772 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015134780.2 |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb81336 | |
Clone ID Related Accession (Same CDS sequence) | XM_015134781.2 | |
Accession Version | XM_015134781.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4347bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | receptor-type tyrosine-protein phosphatase zeta isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041756.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015134781.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014990267.2 |
CDS | 405..4751 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015134781.2 |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb04537 | |
Clone ID Related Accession (Same CDS sequence) | NM_001278382.1 | |
Accession Version | NM_001278382.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-27 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | receptor-type tyrosine-protein phosphatase zeta isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JU335709.1, JV553209.1, JV515406.1, JV477015.1 and JV553208.1. On Jun 2, 2013 this sequence version replaced XM_001083149.2. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688316 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001265311.1 |
CDS | 120..7079 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001278382.1 |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb04557 | |
Clone ID Related Accession (Same CDS sequence) | NM_001278401.1 | |
Accession Version | NM_001278401.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 6939bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-27 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | receptor-type tyrosine-protein phosphatase zeta isoform 2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JU335709.1, JV553209.1, JV515406.1, JV477015.1 and JV553208.1. Transcript Variant: This variant (2) lacks an in-frame alternate exon in the 3' coding region compared to variant 1. It encodes isoform 2, which lacks an internal segment and is shorter than isoform 1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688316 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001265330.1 |
CDS | 120..7058 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001278401.1 |
1 | ATGCGAATCC TAAAGCGCTT CCTCGCTTGC ATTCAGCTCC TCTGTGTTTG CCGCCTGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |