cathD cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	cathD
Entrez Gene ID	45268
Full Name	CG1548 gene product from transcript CG1548-RC
Synonyms	CATH,CG1548,CT3996,CTSD,CathD,Dmel\CG1548,T17
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 43E18-43E18

mRNA and Protein(s)

mRNA	Protein	Name
NM_143756.3	NP_652013.1	cathD, isoform A
NM_001347752.1	NP_001334713.1	cathD, isoform B
NM_001347753.1	NP_001334714.1	cathD, isoform C

Pathways from BioSystems

Homologies

Homo sapiens (human)	CTSD	NP_001900.1
Bos taurus (cattle)	CTSD	NP_001159993.1
Rattus norvegicus (Norway rat)	Ctsd	NP_599161.2
Gallus gallus (chicken)	CTSD	NP_990508.1
Danio rerio (zebrafish)	ctsd	NP_571785.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003277	XP_307784.1
Arabidopsis thaliana (thale cress)	AT1G62290	NP_001031219.1
Mus musculus (house mouse)	Ctsd	NP_034113.1
Caenorhabditis elegans (roundworm)	asp-4	NP_510191.1
Saccharomyces cerevisiae (baker's yeast)	PEP4	NP_015171.1
Xenopus tropicalis (tropical clawed frog)	ctsd	NP_988964.1
Xenopus tropicalis (tropical clawed frog)	LOC613063	NP_001136375.1
Canis lupus familiaris (dog)	CTSD	NP_001020792.1
Magnaporthe oryzae (rice blast fungus)	MGG_00922	XP_003718037.1
Neurospora crassa	NCU02273	XP_959917.1
Arabidopsis thaliana (thale cress)	APA1	NP_172655.1
Oryza sativa (rice)	Os05g0567100	NP_001056348.1
Xenopus tropicalis (tropical clawed frog)	LOC101735147	XP_004914286.1
	CTSD	XP_001091601.1
Drosophila melanogaster (fruit fly)	cathD	NP_652013.1
Kluyveromyces lactis	KLLA0D05929g	XP_453326.1
Oryza sativa (rice)	Os01g0663400	NP_001043786.1
Xenopus tropicalis (tropical clawed frog)	LOC100489529	XP_002938948.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Changes in Drosophila mitochondrial proteins following chaperone-mediated lifespan extension confirm a role of Hsp22 in mitochondrial UPR and reveal a mitochondrial localization for cathepsin D
Title: Changes in Drosophila mitochondrial proteins following chaperone-mediated lifespan extension confirm a role of Hsp22 in mitochondrial UPR and reveal a mitochondrial localization for cathepsin D.

The metabolic pathway leading to neuronal ceroid lipofuscinosis (NCL) pathology is highly conserved during evolution, as demonstrated by this model using cathepsin D mutant flies that exhibit key features of NCLs.
Title: Cathepsin D-deficient Drosophila recapitulate the key features of neuronal ceroid lipofuscinoses.

The following cathD gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cathD cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OFa11387	NM_001347752.1 Latest version!	Drosophila melanogaster cathD, transcript variant B (cathD), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa11387	NM_143756.3 Latest version!	Drosophila melanogaster cathD, transcript variant A (cathD), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa11387	NM_001347753.1 Latest version!	Drosophila melanogaster cathD, transcript variant C (cathD), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cathD ( NM_143756.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_652013.1 Drosophila melanogaster cathD, transcript variant A (cathD), mRNA.

Price & Availability↑

CloneID	OFa11387
Clone ID Related Accession (Same CDS sequence)	NM_143756.3 , NM_001347752.1 , NM_001347753.1
Accession Version	NM_143756.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1179bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	cathD, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_143756.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAGAAGG TTGCACTGCT TCTAGTCGCC TTCCTGGCTG CGGCCGTGGC CCACCCAAAT 
TCGCAGGAGA AGCCCGGATT GCTGCGCGTA CCGCTCCACA AATTTCAGTC GGCCCGCCGG 
CACTTTGCGG ATGTGGGCAC GGAGCTGCAG CAATTGCGCA TTAGGTACGG CGGAGGTGAT 
GTGCCGGAAC CGCTGTCCAA CTATATGGAC GCGCAGTACT ATGGGCCCAT TGCCATTGGC 
TCGCCACCGC AGAACTTCCG TGTGGTTTTC GACACCGGCT CCTCGAACTT GTGGGTGCCG 
TCCAAGAAGT GCCACCTGAC CAACATCGCC TGTTTGATGC ACAACAAGTA CGATGCCTCC 
AAGTCGAAGA CCTACACCAA GAACGGCACT GAGTTCGCCA TCCAGTATGG CTCGGGCAGC 
TTGTCCGGAT ACCTGTCCAC GGATACGGTG TCCATTGCCG GCCTGGACAT CAAGGATCAG 
ACATTCGCTG AGGCGCTCAG TGAGCCGGGC CTGGTCTTCG TAGCTGCCAA GTTCGACGGC 
ATCCTAGGCC TGGGCTACAA CTCCATCTCG GTGGACAAGG TGAAGCCGCC ATTTTACGCC 
ATGTACGAAC AGGGTTTGAT CTCCGCTCCG GTGTTCTCAT TCTACCTGAA TCGCGATCCC 
GCCTCGCCCG AGGGCGGTGA GATCATCTTT GGCGGCTCCG ATCCCAACCA CTACACTGGT 
GAATTCACCT ACTTGCCCGT TACCCGCAAG GCCTACTGGC AAATCAAGAT GGATGCCGCC 
TCCATTGGCG ATTTGCAGCT GTGCAAGGGC GGTTGCCAGG TGATCGCTGA CACCGGTACC 
TCACTAATTG CTGCGCCCTT GGAAGAGGCC ACCTCTATTA ACCAGAAGAT TGGTGGAACT 
CCCATCATCG GTGGTCAGTA TGTGGTTTCT TGCGATCTCA TTCCCCAATT GCCGGTAATC 
AAGTTTGTGC TGGGCGGAAA GACCTTCGAG CTCGAGGGCA AGGACTATAT TCTCCGTGTG 
GCCCAGATGG GTAAGACCAT CTGTCTGTCC GGCTTTATGG GCTTGGACAT CCCCCCTCCA 
AACGGACCCT TGTGGATCCT CGGTGACGTT TTCATTGGCA AATACTACAC CGAGTTTGAC 
ATGGGCAACG ATCGTGTGGG CTTCGCCGAT GCCAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_652013.1
CDS	104..1282
Translation	MQKVALLLVAFLAAAVAHPNSQEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYGGGDVPEPLSNYMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEFAIQYGSGSLSGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGLGYNSISVDKVKPPFYAMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPVTRKAYWQIKMDAASIGDLQLCKGGCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCDLIPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFADAK

Target ORF information:

RefSeq Version	NM_143756.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster cathD, transcript variant A (cathD), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_143756.3

ORF Insert Sequence:

ATGCAGAAGG TTGCACTGCT TCTAGTCGCC TTCCTGGCTG CGGCCGTGGC CCACCCAAAT 
TCGCAGGAGA AGCCCGGATT GCTGCGCGTA CCGCTCCACA AATTTCAGTC GGCCCGCCGG 
CACTTTGCGG ATGTGGGCAC GGAGCTGCAG CAATTGCGCA TTAGGTACGG CGGAGGTGAT 
GTGCCGGAAC CGCTGTCCAA CTATATGGAC GCGCAGTACT ATGGGCCCAT TGCCATTGGC 
TCGCCACCGC AGAACTTCCG TGTGGTTTTC GACACCGGCT CCTCGAACTT GTGGGTGCCG 
TCCAAGAAGT GCCACCTGAC CAACATCGCC TGTTTGATGC ACAACAAGTA CGATGCCTCC 
AAGTCGAAGA CCTACACCAA GAACGGCACT GAGTTCGCCA TCCAGTATGG CTCGGGCAGC 
TTGTCCGGAT ACCTGTCCAC GGATACGGTG TCCATTGCCG GCCTGGACAT CAAGGATCAG 
ACATTCGCTG AGGCGCTCAG TGAGCCGGGC CTGGTCTTCG TAGCTGCCAA GTTCGACGGC 
ATCCTAGGCC TGGGCTACAA CTCCATCTCG GTGGACAAGG TGAAGCCGCC ATTTTACGCC 
ATGTACGAAC AGGGTTTGAT CTCCGCTCCG GTGTTCTCAT TCTACCTGAA TCGCGATCCC 
GCCTCGCCCG AGGGCGGTGA GATCATCTTT GGCGGCTCCG ATCCCAACCA CTACACTGGT 
GAATTCACCT ACTTGCCCGT TACCCGCAAG GCCTACTGGC AAATCAAGAT GGATGCCGCC 
TCCATTGGCG ATTTGCAGCT GTGCAAGGGC GGTTGCCAGG TGATCGCTGA CACCGGTACC 
TCACTAATTG CTGCGCCCTT GGAAGAGGCC ACCTCTATTA ACCAGAAGAT TGGTGGAACT 
CCCATCATCG GTGGTCAGTA TGTGGTTTCT TGCGATCTCA TTCCCCAATT GCCGGTAATC 
AAGTTTGTGC TGGGCGGAAA GACCTTCGAG CTCGAGGGCA AGGACTATAT TCTCCGTGTG 
GCCCAGATGG GTAAGACCAT CTGTCTGTCC GGCTTTATGG GCTTGGACAT CCCCCCTCCA 
AACGGACCCT TGTGGATCCT CGGTGACGTT TTCATTGGCA AATACTACAC CGAGTTTGAC 
ATGGGCAACG ATCGTGTGGG CTTCGCCGAT GCCAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

cathD ( NM_001347752.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001334713.1 Drosophila melanogaster cathD, transcript variant B (cathD), mRNA.

Price & Availability↑

CloneID	OFa11387
Clone ID Related Accession (Same CDS sequence)	NM_143756.3 , NM_001347752.1 , NM_001347753.1
Accession Version	NM_001347752.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1179bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	cathD, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAGAAGG TTGCACTGCT TCTAGTCGCC TTCCTGGCTG CGGCCGTGGC CCACCCAAAT 
TCGCAGGAGA AGCCCGGATT GCTGCGCGTA CCGCTCCACA AATTTCAGTC GGCCCGCCGG 
CACTTTGCGG ATGTGGGCAC GGAGCTGCAG CAATTGCGCA TTAGGTACGG CGGAGGTGAT 
GTGCCGGAAC CGCTGTCCAA CTATATGGAC GCGCAGTACT ATGGGCCCAT TGCCATTGGC 
TCGCCACCGC AGAACTTCCG TGTGGTTTTC GACACCGGCT CCTCGAACTT GTGGGTGCCG 
TCCAAGAAGT GCCACCTGAC CAACATCGCC TGTTTGATGC ACAACAAGTA CGATGCCTCC 
AAGTCGAAGA CCTACACCAA GAACGGCACT GAGTTCGCCA TCCAGTATGG CTCGGGCAGC 
TTGTCCGGAT ACCTGTCCAC GGATACGGTG TCCATTGCCG GCCTGGACAT CAAGGATCAG 
ACATTCGCTG AGGCGCTCAG TGAGCCGGGC CTGGTCTTCG TAGCTGCCAA GTTCGACGGC 
ATCCTAGGCC TGGGCTACAA CTCCATCTCG GTGGACAAGG TGAAGCCGCC ATTTTACGCC 
ATGTACGAAC AGGGTTTGAT CTCCGCTCCG GTGTTCTCAT TCTACCTGAA TCGCGATCCC 
GCCTCGCCCG AGGGCGGTGA GATCATCTTT GGCGGCTCCG ATCCCAACCA CTACACTGGT 
GAATTCACCT ACTTGCCCGT TACCCGCAAG GCCTACTGGC AAATCAAGAT GGATGCCGCC 
TCCATTGGCG ATTTGCAGCT GTGCAAGGGC GGTTGCCAGG TGATCGCTGA CACCGGTACC 
TCACTAATTG CTGCGCCCTT GGAAGAGGCC ACCTCTATTA ACCAGAAGAT TGGTGGAACT 
CCCATCATCG GTGGTCAGTA TGTGGTTTCT TGCGATCTCA TTCCCCAATT GCCGGTAATC 
AAGTTTGTGC TGGGCGGAAA GACCTTCGAG CTCGAGGGCA AGGACTATAT TCTCCGTGTG 
GCCCAGATGG GTAAGACCAT CTGTCTGTCC GGCTTTATGG GCTTGGACAT CCCCCCTCCA 
AACGGACCCT TGTGGATCCT CGGTGACGTT TTCATTGGCA AATACTACAC CGAGTTTGAC 
ATGGGCAACG ATCGTGTGGG CTTCGCCGAT GCCAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001334713.1
CDS	104..1282
Translation	MQKVALLLVAFLAAAVAHPNSQEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYGGGDVPEPLSNYMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEFAIQYGSGSLSGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGLGYNSISVDKVKPPFYAMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPVTRKAYWQIKMDAASIGDLQLCKGGCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCDLIPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFADAK

Target ORF information:

RefSeq Version	NM_001347752.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster cathD, transcript variant B (cathD), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001347752.1

ORF Insert Sequence:

ATGCAGAAGG TTGCACTGCT TCTAGTCGCC TTCCTGGCTG CGGCCGTGGC CCACCCAAAT 
TCGCAGGAGA AGCCCGGATT GCTGCGCGTA CCGCTCCACA AATTTCAGTC GGCCCGCCGG 
CACTTTGCGG ATGTGGGCAC GGAGCTGCAG CAATTGCGCA TTAGGTACGG CGGAGGTGAT 
GTGCCGGAAC CGCTGTCCAA CTATATGGAC GCGCAGTACT ATGGGCCCAT TGCCATTGGC 
TCGCCACCGC AGAACTTCCG TGTGGTTTTC GACACCGGCT CCTCGAACTT GTGGGTGCCG 
TCCAAGAAGT GCCACCTGAC CAACATCGCC TGTTTGATGC ACAACAAGTA CGATGCCTCC 
AAGTCGAAGA CCTACACCAA GAACGGCACT GAGTTCGCCA TCCAGTATGG CTCGGGCAGC 
TTGTCCGGAT ACCTGTCCAC GGATACGGTG TCCATTGCCG GCCTGGACAT CAAGGATCAG 
ACATTCGCTG AGGCGCTCAG TGAGCCGGGC CTGGTCTTCG TAGCTGCCAA GTTCGACGGC 
ATCCTAGGCC TGGGCTACAA CTCCATCTCG GTGGACAAGG TGAAGCCGCC ATTTTACGCC 
ATGTACGAAC AGGGTTTGAT CTCCGCTCCG GTGTTCTCAT TCTACCTGAA TCGCGATCCC 
GCCTCGCCCG AGGGCGGTGA GATCATCTTT GGCGGCTCCG ATCCCAACCA CTACACTGGT 
GAATTCACCT ACTTGCCCGT TACCCGCAAG GCCTACTGGC AAATCAAGAT GGATGCCGCC 
TCCATTGGCG ATTTGCAGCT GTGCAAGGGC GGTTGCCAGG TGATCGCTGA CACCGGTACC 
TCACTAATTG CTGCGCCCTT GGAAGAGGCC ACCTCTATTA ACCAGAAGAT TGGTGGAACT 
CCCATCATCG GTGGTCAGTA TGTGGTTTCT TGCGATCTCA TTCCCCAATT GCCGGTAATC 
AAGTTTGTGC TGGGCGGAAA GACCTTCGAG CTCGAGGGCA AGGACTATAT TCTCCGTGTG 
GCCCAGATGG GTAAGACCAT CTGTCTGTCC GGCTTTATGG GCTTGGACAT CCCCCCTCCA 
AACGGACCCT TGTGGATCCT CGGTGACGTT TTCATTGGCA AATACTACAC CGAGTTTGAC 
ATGGGCAACG ATCGTGTGGG CTTCGCCGAT GCCAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

cathD ( NM_001347753.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001334714.1 Drosophila melanogaster cathD, transcript variant C (cathD), mRNA.

Price & Availability↑

CloneID	OFa11387
Clone ID Related Accession (Same CDS sequence)	NM_143756.3 , NM_001347752.1 , NM_001347753.1
Accession Version	NM_001347753.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1179bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	cathD, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAGAAGG TTGCACTGCT TCTAGTCGCC TTCCTGGCTG CGGCCGTGGC CCACCCAAAT 
TCGCAGGAGA AGCCCGGATT GCTGCGCGTA CCGCTCCACA AATTTCAGTC GGCCCGCCGG 
CACTTTGCGG ATGTGGGCAC GGAGCTGCAG CAATTGCGCA TTAGGTACGG CGGAGGTGAT 
GTGCCGGAAC CGCTGTCCAA CTATATGGAC GCGCAGTACT ATGGGCCCAT TGCCATTGGC 
TCGCCACCGC AGAACTTCCG TGTGGTTTTC GACACCGGCT CCTCGAACTT GTGGGTGCCG 
TCCAAGAAGT GCCACCTGAC CAACATCGCC TGTTTGATGC ACAACAAGTA CGATGCCTCC 
AAGTCGAAGA CCTACACCAA GAACGGCACT GAGTTCGCCA TCCAGTATGG CTCGGGCAGC 
TTGTCCGGAT ACCTGTCCAC GGATACGGTG TCCATTGCCG GCCTGGACAT CAAGGATCAG 
ACATTCGCTG AGGCGCTCAG TGAGCCGGGC CTGGTCTTCG TAGCTGCCAA GTTCGACGGC 
ATCCTAGGCC TGGGCTACAA CTCCATCTCG GTGGACAAGG TGAAGCCGCC ATTTTACGCC 
ATGTACGAAC AGGGTTTGAT CTCCGCTCCG GTGTTCTCAT TCTACCTGAA TCGCGATCCC 
GCCTCGCCCG AGGGCGGTGA GATCATCTTT GGCGGCTCCG ATCCCAACCA CTACACTGGT 
GAATTCACCT ACTTGCCCGT TACCCGCAAG GCCTACTGGC AAATCAAGAT GGATGCCGCC 
TCCATTGGCG ATTTGCAGCT GTGCAAGGGC GGTTGCCAGG TGATCGCTGA CACCGGTACC 
TCACTAATTG CTGCGCCCTT GGAAGAGGCC ACCTCTATTA ACCAGAAGAT TGGTGGAACT 
CCCATCATCG GTGGTCAGTA TGTGGTTTCT TGCGATCTCA TTCCCCAATT GCCGGTAATC 
AAGTTTGTGC TGGGCGGAAA GACCTTCGAG CTCGAGGGCA AGGACTATAT TCTCCGTGTG 
GCCCAGATGG GTAAGACCAT CTGTCTGTCC GGCTTTATGG GCTTGGACAT CCCCCCTCCA 
AACGGACCCT TGTGGATCCT CGGTGACGTT TTCATTGGCA AATACTACAC CGAGTTTGAC 
ATGGGCAACG ATCGTGTGGG CTTCGCCGAT GCCAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001334714.1
CDS	104..1282
Translation	MQKVALLLVAFLAAAVAHPNSQEKPGLLRVPLHKFQSARRHFADVGTELQQLRIRYGGGDVPEPLSNYMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEFAIQYGSGSLSGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGLGYNSISVDKVKPPFYAMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPVTRKAYWQIKMDAASIGDLQLCKGGCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCDLIPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFADAK

Target ORF information:

RefSeq Version	NM_001347753.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster cathD, transcript variant C (cathD), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001347753.1

ORF Insert Sequence:

ATGCAGAAGG TTGCACTGCT TCTAGTCGCC TTCCTGGCTG CGGCCGTGGC CCACCCAAAT 
TCGCAGGAGA AGCCCGGATT GCTGCGCGTA CCGCTCCACA AATTTCAGTC GGCCCGCCGG 
CACTTTGCGG ATGTGGGCAC GGAGCTGCAG CAATTGCGCA TTAGGTACGG CGGAGGTGAT 
GTGCCGGAAC CGCTGTCCAA CTATATGGAC GCGCAGTACT ATGGGCCCAT TGCCATTGGC 
TCGCCACCGC AGAACTTCCG TGTGGTTTTC GACACCGGCT CCTCGAACTT GTGGGTGCCG 
TCCAAGAAGT GCCACCTGAC CAACATCGCC TGTTTGATGC ACAACAAGTA CGATGCCTCC 
AAGTCGAAGA CCTACACCAA GAACGGCACT GAGTTCGCCA TCCAGTATGG CTCGGGCAGC 
TTGTCCGGAT ACCTGTCCAC GGATACGGTG TCCATTGCCG GCCTGGACAT CAAGGATCAG 
ACATTCGCTG AGGCGCTCAG TGAGCCGGGC CTGGTCTTCG TAGCTGCCAA GTTCGACGGC 
ATCCTAGGCC TGGGCTACAA CTCCATCTCG GTGGACAAGG TGAAGCCGCC ATTTTACGCC 
ATGTACGAAC AGGGTTTGAT CTCCGCTCCG GTGTTCTCAT TCTACCTGAA TCGCGATCCC 
GCCTCGCCCG AGGGCGGTGA GATCATCTTT GGCGGCTCCG ATCCCAACCA CTACACTGGT 
GAATTCACCT ACTTGCCCGT TACCCGCAAG GCCTACTGGC AAATCAAGAT GGATGCCGCC 
TCCATTGGCG ATTTGCAGCT GTGCAAGGGC GGTTGCCAGG TGATCGCTGA CACCGGTACC 
TCACTAATTG CTGCGCCCTT GGAAGAGGCC ACCTCTATTA ACCAGAAGAT TGGTGGAACT 
CCCATCATCG GTGGTCAGTA TGTGGTTTCT TGCGATCTCA TTCCCCAATT GCCGGTAATC 
AAGTTTGTGC TGGGCGGAAA GACCTTCGAG CTCGAGGGCA AGGACTATAT TCTCCGTGTG 
GCCCAGATGG GTAAGACCAT CTGTCTGTCC GGCTTTATGG GCTTGGACAT CCCCCCTCCA 
AACGGACCCT TGTGGATCCT CGGTGACGTT TTCATTGGCA AATACTACAC CGAGTTTGAC 
ATGGGCAACG ATCGTGTGGG CTTCGCCGAT GCCAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
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The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
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cathD cDNA ORF clone, Drosophila melanogaster(fruit fly)

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ORF Insert Sequence:

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