CG5948 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG5948
Entrez Gene ID	43133
Full Name	CG5948 gene product from transcript CG5948-RA
Synonyms	Dmel\CG5948
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 96F6-96F7

mRNA and Protein(s)

mRNA	Protein	Name
NM_143183.2	NP_651440.1	uncharacterized protein, isoform A
NM_001260377.1	NP_001247306.1	uncharacterized protein, isoform B

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG5948	NP_001247306.1
Anopheles gambiae (African malaria mosquito)	CUSOD1	XP_308380.5

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG5948 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG5948 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa06150	NM_143183.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5948), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OFa08845	NM_001260377.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5948), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG5948 ( NM_143183.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_651440.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG5948), mRNA.

Price & Availability↑

CloneID	OFa06150
Clone ID Related Accession (Same CDS sequence)	NM_143183.2
Accession Version	NM_143183.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 31, 2011 this sequence version replaced NM_143183.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCTCATTA AACTGATATT GGCGTTGGTA ATTGGTTATG GCGGCATTTT TGCGCCTGGC 
AGTGCACAAA ATCTGTTGGA TCGACTGCGT CCGGTGAATA TGACCCGCTT CGATGATGGC 
ATTAAAGTCG TTTCCGGCAC CAAAGTGAAG CGCTATGAGC GCCTGACGGT TCCGCTGGGT 
GGTCCTGTCG GCATTCCAGG AGCCGCTGGC CTTTTGGGAC CTCTGCTGCC TCCTCAGCCG 
TCGTATTTGG GATACACCTA TCAGTTGGTG CCTCAATGGC AGGCGGGTGC AAAACTGATG 
GGCGATGGCG AAGGAGCGGG CGTGGCCGGA ATGATATCCT TTGTGCAGCT GCCCTACAAC 
TCGGACATTA GGGTGACGAT CAATGTGACT GGATTGCCAC CCGGTAAACA TGCCCTGCAT 
ATTCACACCT TTGGCGATCT CAGCGATGGT TGCAAGTCCA CCGGTGGACA GTTTCCCAAT 
AACTTTCTCG GTAATGTGGA CACCAAGGAT GATGGCAGCA TCTCGGCGGT CTTTCAGAGC 
ATTTACCTGC AATTGTTTGG CATCAATGGG ATCGTTGGGC GTTCCATAGT GATACACAGC 
AAAGCAATCG ATCTGAATAC TGCCCTAAAT GCAGAGGTAT TTTCCTCCTC CCTGCAAGCC 
ATGCCAAATC CCCTGGCCTA TCAGAACGAG GAGAATTCAC TGGGTCCTGC CATCGCCTGT 
GGGGTTATAA GTATTATGAG CACAGCCGCC AGTTCATCAG GTATGGCAAC AGCTGCACCA 
GCACCACCTG CAATGGAAAA TCCAGAGATT TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_651440.1
CDS	59..871
Translation	MLIKLILALVIGYGGIFAPGSAQNLLDRLRPVNMTRFDDGIKVVSGTKVKRYERLTVPLGGPVGIPGAAGLLGPLLPPQPSYLGYTYQLVPQWQAGAKLMGDGEGAGVAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQFPNNFLGNVDTKDDGSISAVFQSIYLQLFGINGIVGRSIVIHSKAIDLNTALNAEVFSSSLQAMPNPLAYQNEENSLGPAIACGVISIMSTAASSSGMATAAPAPPAMENPEI

Target ORF information:

RefSeq Version	NM_143183.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG5948), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_143183.2

ORF Insert Sequence:

ATGCTCATTA AACTGATATT GGCGTTGGTA ATTGGTTATG GCGGCATTTT TGCGCCTGGC 
AGTGCACAAA ATCTGTTGGA TCGACTGCGT CCGGTGAATA TGACCCGCTT CGATGATGGC 
ATTAAAGTCG TTTCCGGCAC CAAAGTGAAG CGCTATGAGC GCCTGACGGT TCCGCTGGGT 
GGTCCTGTCG GCATTCCAGG AGCCGCTGGC CTTTTGGGAC CTCTGCTGCC TCCTCAGCCG 
TCGTATTTGG GATACACCTA TCAGTTGGTG CCTCAATGGC AGGCGGGTGC AAAACTGATG 
GGCGATGGCG AAGGAGCGGG CGTGGCCGGA ATGATATCCT TTGTGCAGCT GCCCTACAAC 
TCGGACATTA GGGTGACGAT CAATGTGACT GGATTGCCAC CCGGTAAACA TGCCCTGCAT 
ATTCACACCT TTGGCGATCT CAGCGATGGT TGCAAGTCCA CCGGTGGACA GTTTCCCAAT 
AACTTTCTCG GTAATGTGGA CACCAAGGAT GATGGCAGCA TCTCGGCGGT CTTTCAGAGC 
ATTTACCTGC AATTGTTTGG CATCAATGGG ATCGTTGGGC GTTCCATAGT GATACACAGC 
AAAGCAATCG ATCTGAATAC TGCCCTAAAT GCAGAGGTAT TTTCCTCCTC CCTGCAAGCC 
ATGCCAAATC CCCTGGCCTA TCAGAACGAG GAGAATTCAC TGGGTCCTGC CATCGCCTGT 
GGGGTTATAA GTATTATGAG CACAGCCGCC AGTTCATCAG GTATGGCAAC AGCTGCACCA 
GCACCACCTG CAATGGAAAA TCCAGAGATT TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5948 ( NM_001260377.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001247306.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG5948), mRNA.

Price & Availability↑

CloneID	OFa08845
Clone ID Related Accession (Same CDS sequence)	NM_001260377.1
Accession Version	NM_001260377.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 810bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCTCATTA AACTGATATT GGCGTTGGTA ATTGGTTATG GCGGCATTTT TGCGCCTGGC 
AGTGCACAAA ATCTGTTGGA TCGACTGCGT CCGGTGAATA TGACCCGCTT CGATGATGGC 
ATTAAAGTCG TTTCCGGCAC CAAAGTGAAG CGCTATGAGC GCCTGACGGT TCCGCTGGGT 
GGTCCTGTCG GCATTCCAGG AGCCGCTGGC CTTTTGGGAC CTCTGCTGCC TCCTCAGCCG 
TCGTATTTGG GATACACCTA TTTGGTGCCT CAATGGCAGG CGGGTGCAAA ACTGATGGGC 
GATGGCGAAG GAGCGGGCGT GGCCGGAATG ATATCCTTTG TGCAGCTGCC CTACAACTCG 
GACATTAGGG TGACGATCAA TGTGACTGGA TTGCCACCCG GTAAACATGC CCTGCATATT 
CACACCTTTG GCGATCTCAG CGATGGTTGC AAGTCCACCG GTGGACAGTT TCCCAATAAC 
TTTCTCGGTA ATGTGGACAC CAAGGATGAT GGCAGCATCT CGGCGGTCTT TCAGAGCATT 
TACCTGCAAT TGTTTGGCAT CAATGGGATC GTTGGGCGTT CCATAGTGAT ACACAGCAAA 
GCAATCGATC TGAATACTGC CCTAAATGCA GAGGTATTTT CCTCCTCCCT GCAAGCCATG 
CCAAATCCCC TGGCCTATCA GAACGAGGAG AATTCACTGG GTCCTGCCAT CGCCTGTGGG 
GTTATAAGTA TTATGAGCAC AGCCGCCAGT TCATCAGGTA TGGCAACAGC TGCACCAGCA 
CCACCTGCAA TGGAAAATCC AGAGATTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001247306.1
CDS	59..868
Translation	MLIKLILALVIGYGGIFAPGSAQNLLDRLRPVNMTRFDDGIKVVSGTKVKRYERLTVPLGGPVGIPGAAGLLGPLLPPQPSYLGYTYLVPQWQAGAKLMGDGEGAGVAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQFPNNFLGNVDTKDDGSISAVFQSIYLQLFGINGIVGRSIVIHSKAIDLNTALNAEVFSSSLQAMPNPLAYQNEENSLGPAIACGVISIMSTAASSSGMATAAPAPPAMENPEI

Target ORF information:

RefSeq Version	NM_001260377.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5948), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001260377.1

ORF Insert Sequence:

ATGCTCATTA AACTGATATT GGCGTTGGTA ATTGGTTATG GCGGCATTTT TGCGCCTGGC 
AGTGCACAAA ATCTGTTGGA TCGACTGCGT CCGGTGAATA TGACCCGCTT CGATGATGGC 
ATTAAAGTCG TTTCCGGCAC CAAAGTGAAG CGCTATGAGC GCCTGACGGT TCCGCTGGGT 
GGTCCTGTCG GCATTCCAGG AGCCGCTGGC CTTTTGGGAC CTCTGCTGCC TCCTCAGCCG 
TCGTATTTGG GATACACCTA TTTGGTGCCT CAATGGCAGG CGGGTGCAAA ACTGATGGGC 
GATGGCGAAG GAGCGGGCGT GGCCGGAATG ATATCCTTTG TGCAGCTGCC CTACAACTCG 
GACATTAGGG TGACGATCAA TGTGACTGGA TTGCCACCCG GTAAACATGC CCTGCATATT 
CACACCTTTG GCGATCTCAG CGATGGTTGC AAGTCCACCG GTGGACAGTT TCCCAATAAC 
TTTCTCGGTA ATGTGGACAC CAAGGATGAT GGCAGCATCT CGGCGGTCTT TCAGAGCATT 
TACCTGCAAT TGTTTGGCAT CAATGGGATC GTTGGGCGTT CCATAGTGAT ACACAGCAAA 
GCAATCGATC TGAATACTGC CCTAAATGCA GAGGTATTTT CCTCCTCCCT GCAAGCCATG 
CCAAATCCCC TGGCCTATCA GAACGAGGAG AATTCACTGG GTCCTGCCAT CGCCTGTGGG 
GTTATAAGTA TTATGAGCAC AGCCGCCAGT TCATCAGGTA TGGCAACAGC TGCACCAGCA 
CCACCTGCAA TGGAAAATCC AGAGATTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG5948 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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