CG6654 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG6654
Entrez Gene ID	41831
Full Name	CG6654 gene product from transcript CG6654-RA
Synonyms	Dmel\CG6654
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 88E3-88E3

mRNA and Protein(s)

mRNA	Protein	Name
NM_142172.3	NP_650429.1	uncharacterized protein

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG6654	NP_650429.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP004714	XP_001231099.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG6654 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG6654 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa04938	NM_142172.3 Latest version!	Drosophila melanogaster uncharacterized protein (CG6654), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG6654 ( NM_142172.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_650429.1 Drosophila melanogaster uncharacterized protein (CG6654), mRNA.

Price & Availability↑

CloneID	OFa04938
Clone ID Related Accession (Same CDS sequence)	NM_142172.3
Accession Version	NM_142172.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1920bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On May 8, 2012 this sequence version replaced NM_142172.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGATGTGG ACAAGATCTG TCTTACCTGC CTGAGTTCCA CGGGACCACT CCTGTCCATC 
TACGACGGCG GATCCGGCAG CTGCCTGGCG GACATGATCC GGGAGTTCAC AAAAACCAAG 
CCCCGCCGCA ACGATAATCT GCCCGAGAAG GTGTGCCTAA GCTGTTTGAG TGAAATCTCC 
AATTGCTATA CCTTCAAGAT CAAGTGCGAG AACTCCAGTC GCACCCTGCG CCAATTGCTG 
CCGAATGCGT TGCCGGAGGA GCCCGATAGC AAGGTGTCTA TCAGTTGTCC AGTGGCCACG 
ACGGACCAGG CTGTGCAGAC CACTAGCTGG GAGCCGGACA GATGCACAGC CTCCGTGCAA 
ACGGACGCAG TGACTACCAC AGACGCCGAA CAGAATACCA GCCTGATTAA GTCAACGATT 
TCAGTGGACC TGGACTACGA AGGCGAGGGC GAGGTATTCG ATTACGAGCT GCCGGATGAG 
CCCGTCGAAA AGACCACCAG CCTCATCCTG CAGGTCCAGG GGAACTTGAA GGACGAAAAG 
GAAGTTGTGT TTACCCAAAC CAATGTTATT TACGAAGGCG ACGACCACGA GCTGGAACAG 
CAGATCAGGG AATGTAACCT GGCCATCTTC GAAGGTGTCG ATAACGAGGC GGAGATCATC 
ACAGTAACCG CTCCGCAGGT AACCACCAGA AAGAGCGCTG CCAAGCTTCT AACGCAGCAG 
GAAAACGATA AGCATCAGAC TCCTGTGGGT TCTAAGGAGG AAGCACGCGA ATTAGAGAAG 
GAACAAGTAC CTCAGTCGGC TAAGCGCACC TCACGGCGTC GCGGAGTTGT CAAGCAGGAT 
GTACCGGCTA CACCGCCGTC AGATGCAGAG CCTTCCCCCA AACAGCATCG GTTAGGAACA 
CAGCGAAAAC TCAGCGCGCC AAGAGCGGGA ACAGTAAACG GGCCAAGCAC AACGTCAGGA 
GCAGCTACTA CCCCTGAGCT CAAATATCAC TGTGATCGTT GCAATGCGGG ATTCGCGGTG 
GAGAAATCGT TGATGATCCA CAGACGCCAA AAGGGCTGCA TTAATCGCAA CTACAAGTGC 
AATGAGTGCG AAAAGGTCTT CGTGTCGCCG GATCACTTGG CGGAACACCA GGCCAGTCAT 
GGTGCCCACA ATTGCCCGGA GTGTGGAATA CGCTGTGATT CCAAGGAGGC ACTTAGCAAG 
CACATGGTGC AGGGCCACAA GCGGAATCTG CGGAATCAGT GCAATATCTG TCAGAAAGTA 
TTCACCATGC TGTCCACGCT GCGTGACCAC ATGCGCATCC ACACCGGCGA GAAACCCTTT 
GTGTGCAATA TCTGTGGCAA GAGCTTTACA CAGAATGCCA ATCTGCGCCA GCACAAGCTG 
CGTCACTCGG AGACAAAGAG TTTCAAGTGC GAGCTGTGCC CGCACTCGTT TGTTACCAAG 
GCGGAACTCA CCTCTCATGC ACGCACCCAC ACCGGCGACA AGCCCTTCGA GTGTGAGGTG 
TGCTTGGCCA GATTCACCAC TAGTTGCTCC CTGGCCAAGC ACAAACGAAA GCACACTGGC 
GAACGGCCAT ACGCCTGCGA TCTCTGCCCC ATGAGATTCA CTGCCCTCAA TGTGCTAAAG 
AACCACCGAA GGACGCACAC AGGTGAGCGG CCGTACGTCT GTCCCTTCTG CTCGAAGACC 
TTTACGCAGC GGGGTGACTG CCAGATGCAC CAGCGTACAC ATCAGGGCGA GCGGATCTAC 
ATTTGTCCGG TGTGCAATGA GGAGTTCAAG TCGATGCCCG AGATGCGATC ACATCTGGCC 
GGCCACGAGC AGCACGACAA ACGCCTGGTG CACTTCACAT TTCTAAGCAA CAAGGAAAAC 
GGAAGCGGGG CCCTTGAAGA GGAACTTAAC GAGATGACCG AGTCTGCGCT TATGCTATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_650429.1
CDS	74..1993
Translation	MDVDKICLTCLSSTGPLLSIYDGGSGSCLADMIREFTKTKPRRNDNLPEKVCLSCLSEISNCYTFKIKCENSSRTLRQLLPNALPEEPDSKVSISCPVATTDQAVQTTSWEPDRCTASVQTDAVTTTDAEQNTSLIKSTISVDLDYEGEGEVFDYELPDEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHELEQQIRECNLAIFEGVDNEAEIITVTAPQVTTRKSAAKLLTQQENDKHQTPVGSKEEARELEKEQVPQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGAHNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGHEQHDKRLVHFTFLSNKENGSGALEEELNEMTESALML

Target ORF information:

RefSeq Version	NM_142172.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG6654), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_142172.3

ORF Insert Sequence:

ATGGATGTGG ACAAGATCTG TCTTACCTGC CTGAGTTCCA CGGGACCACT CCTGTCCATC 
TACGACGGCG GATCCGGCAG CTGCCTGGCG GACATGATCC GGGAGTTCAC AAAAACCAAG 
CCCCGCCGCA ACGATAATCT GCCCGAGAAG GTGTGCCTAA GCTGTTTGAG TGAAATCTCC 
AATTGCTATA CCTTCAAGAT CAAGTGCGAG AACTCCAGTC GCACCCTGCG CCAATTGCTG 
CCGAATGCGT TGCCGGAGGA GCCCGATAGC AAGGTGTCTA TCAGTTGTCC AGTGGCCACG 
ACGGACCAGG CTGTGCAGAC CACTAGCTGG GAGCCGGACA GATGCACAGC CTCCGTGCAA 
ACGGACGCAG TGACTACCAC AGACGCCGAA CAGAATACCA GCCTGATTAA GTCAACGATT 
TCAGTGGACC TGGACTACGA AGGCGAGGGC GAGGTATTCG ATTACGAGCT GCCGGATGAG 
CCCGTCGAAA AGACCACCAG CCTCATCCTG CAGGTCCAGG GGAACTTGAA GGACGAAAAG 
GAAGTTGTGT TTACCCAAAC CAATGTTATT TACGAAGGCG ACGACCACGA GCTGGAACAG 
CAGATCAGGG AATGTAACCT GGCCATCTTC GAAGGTGTCG ATAACGAGGC GGAGATCATC 
ACAGTAACCG CTCCGCAGGT AACCACCAGA AAGAGCGCTG CCAAGCTTCT AACGCAGCAG 
GAAAACGATA AGCATCAGAC TCCTGTGGGT TCTAAGGAGG AAGCACGCGA ATTAGAGAAG 
GAACAAGTAC CTCAGTCGGC TAAGCGCACC TCACGGCGTC GCGGAGTTGT CAAGCAGGAT 
GTACCGGCTA CACCGCCGTC AGATGCAGAG CCTTCCCCCA AACAGCATCG GTTAGGAACA 
CAGCGAAAAC TCAGCGCGCC AAGAGCGGGA ACAGTAAACG GGCCAAGCAC AACGTCAGGA 
GCAGCTACTA CCCCTGAGCT CAAATATCAC TGTGATCGTT GCAATGCGGG ATTCGCGGTG 
GAGAAATCGT TGATGATCCA CAGACGCCAA AAGGGCTGCA TTAATCGCAA CTACAAGTGC 
AATGAGTGCG AAAAGGTCTT CGTGTCGCCG GATCACTTGG CGGAACACCA GGCCAGTCAT 
GGTGCCCACA ATTGCCCGGA GTGTGGAATA CGCTGTGATT CCAAGGAGGC ACTTAGCAAG 
CACATGGTGC AGGGCCACAA GCGGAATCTG CGGAATCAGT GCAATATCTG TCAGAAAGTA 
TTCACCATGC TGTCCACGCT GCGTGACCAC ATGCGCATCC ACACCGGCGA GAAACCCTTT 
GTGTGCAATA TCTGTGGCAA GAGCTTTACA CAGAATGCCA ATCTGCGCCA GCACAAGCTG 
CGTCACTCGG AGACAAAGAG TTTCAAGTGC GAGCTGTGCC CGCACTCGTT TGTTACCAAG 
GCGGAACTCA CCTCTCATGC ACGCACCCAC ACCGGCGACA AGCCCTTCGA GTGTGAGGTG 
TGCTTGGCCA GATTCACCAC TAGTTGCTCC CTGGCCAAGC ACAAACGAAA GCACACTGGC 
GAACGGCCAT ACGCCTGCGA TCTCTGCCCC ATGAGATTCA CTGCCCTCAA TGTGCTAAAG 
AACCACCGAA GGACGCACAC AGGTGAGCGG CCGTACGTCT GTCCCTTCTG CTCGAAGACC 
TTTACGCAGC GGGGTGACTG CCAGATGCAC CAGCGTACAC ATCAGGGCGA GCGGATCTAC 
ATTTGTCCGG TGTGCAATGA GGAGTTCAAG TCGATGCCCG AGATGCGATC ACATCTGGCC 
GGCCACGAGC AGCACGACAA ACGCCTGGTG CACTTCACAT TTCTAAGCAA CAAGGAAAAC 
GGAAGCGGGG CCCTTGAAGA GGAACTTAAC GAGATGACCG AGTCTGCGCT TATGCTATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG6654 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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