Gene Symbol | Nopp140 |
Entrez Gene ID | 40433 |
Full Name | CG7421 gene product from transcript CG7421-RE |
Synonyms | CG7421,DmNopp140,Dmel\CG7421,Nopp- 140,nopp140 |
Gene Type | protein-coding |
Organism | Drosophila melanogaster(fruit fly) |
Genome |
ORF » Species Summary » Drosophila melanogaster » Nopp140 cDNA ORF clone
Gene Symbol | Nopp140 |
Entrez Gene ID | 40433 |
Full Name | CG7421 gene product from transcript CG7421-RE |
Synonyms | CG7421,DmNopp140,Dmel\CG7421,Nopp- 140,nopp140 |
Gene Type | protein-coding |
Organism | Drosophila melanogaster(fruit fly) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_168940.3 | NP_730693.1 | Nopp140, isoform B |
NM_001275266.1 | NP_001262195.1 | Nopp140, isoform E |
NM_168941.4 | NP_730694.2 | Nopp140, isoform A |
NM_001202229.2 | NP_001189158.2 | Nopp140, isoform F |
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Nopp140 is not required for overall nucleolar integrity, but is required for 2'-O-methylation. Loss of Nopp140 impairs 2'-O-methylation of 18S and 28S rRNA.
Title: Deletion of Drosophila Nopp140 induces subcellular ribosomopathies.
occurrence of apoptosis, autophagy and phenoloxidase A3 release to the hemolymph upon nucleolar stress correlated well with the demonstrated activation of Jun N-terminal kinase (JNK) in Nopp140-depleted larvae
Title: Nucleolar stress in Drosophila melanogaster: RNAi-mediated depletion of Nopp140.
Data show that RNAi knockdown of Nopp140 induces Minute-like phenotypes in Drosophila that are reminiscent of human craniofacial malformations associated with Treacher Collins syndrome.
Title: RNAi knockdown of Nopp140 induces Minute-like phenotypes in Drosophila.
Pole cells contained GFP-Nopp140 during the syncytial embryonic stages, but their nucleologenesis started at gastrulation.
Title: Tracking nucleolar dynamics with GFP-Nopp140 during Drosophila oogenesis and embryogenesis.
Two splice variants of Nopp140
Title: Two splice variants of Nopp140 in Drosophila melanogaster.
The following Nopp140 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Nopp140 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OFa19237 | |
Clone ID Related Accession (Same CDS sequence) | NM_001275266.1 | |
Accession Version | NM_001275266.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2322bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | Nopp140, isoform E | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGACAGACC TGCTAAAGAT AGCCGATGCA ATCGTCCTGG AGTACTTGCA GTCCAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001262195.1 |
CDS | 106..2427 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001275266.1 |
1 | ATGACAGACC TGCTAAAGAT AGCCGATGCA ATCGTCCTGG AGTACTTGCA GTCCAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa19238 | |
Clone ID Related Accession (Same CDS sequence) | NM_001202229.2 | |
Accession Version | NM_001202229.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2058bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | Nopp140, isoform F | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_001202229.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGACAGACC TGCTAAAGAT AGCCGATGCA ATCGTCCTGG AGTACTTGCA GTCCAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001189158.2 |
CDS | 106..2163 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001202229.2 |
1 | ATGACAGACC TGCTAAAGAT AGCCGATGCA ATCGTCCTGG AGTACTTGCA GTCCAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa21222 | |
Clone ID Related Accession (Same CDS sequence) | NM_168940.3 | |
Accession Version | NM_168940.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2061bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | Nopp140, isoform B | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_168940.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGACAGACC TGCTAAAGAT AGCCGATGCA ATCGTCCTGG AGTACTTGCA GTCCAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_730693.1 |
CDS | 106..2166 |
Translation |
Target ORF information:
Target ORF information:
|
NM_168940.3 |
1 | ATGACAGACC TGCTAAAGAT AGCCGATGCA ATCGTCCTGG AGTACTTGCA GTCCAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa21224 | |
Clone ID Related Accession (Same CDS sequence) | NM_168941.4 | |
Accession Version | NM_168941.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | Nopp140, isoform A | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jan 16, 2013 this sequence version replaced NM_168941.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGACAGACC TGCTAAAGAT AGCCGATGCA ATCGTCCTGG AGTACTTGCA GTCCAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_730694.2 |
CDS | 106..2268 |
Translation |
Target ORF information:
Target ORF information:
|
NM_168941.4 |
1 | ATGACAGACC TGCTAAAGAT AGCCGATGCA ATCGTCCTGG AGTACTTGCA GTCCAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data. |
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders. |
Sequence finishing and mapping of Drosophila melanogaster heterochromatin. |
The Release 5.1 annotation of Drosophila melanogaster heterochromatin. |
Combined evidence annotation of transposable elements in genome sequences. |