CG12338 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG12338
Entrez Gene ID	36128
Full Name	CG12338 gene product from transcript CG12338-RB
Synonyms	Dmel\CG12338
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 47B7-47B7

mRNA and Protein(s)

mRNA	Protein	Name
NM_001299363.1	NP_001286292.1	uncharacterized protein, isoform B
NM_136759.3	NP_610603.2	uncharacterized protein, isoform A

Pathways from BioSystems

Homologies

	LOC100428490	XP_002803988.1
Danio rerio (zebrafish)	zgc:172341	XP_002665184.1
Magnaporthe oryzae (rice blast fungus)	MGG_08011	XP_003714961.1
Bos taurus (cattle)	DDO	NP_776333.1
Danio rerio (zebrafish)	LOC100332733	XP_002665186.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005323	XP_315337.2
Kluyveromyces lactis	KLLA0A02475g	XP_451109.1
Schizosaccharomyces pombe (fission yeast)	SPCC1450.07c	NP_588306.1
Xenopus tropicalis (tropical clawed frog)	ddo	XP_004914617.1
Homo sapiens (human)	DDO	NP_003640.2
Rattus norvegicus (Norway rat)	Ddo	NP_001102935.1
Drosophila melanogaster (fruit fly)	CG12338	NP_610603.2
Caenorhabditis elegans (roundworm)	daao-1	NP_500234.3
Neurospora crassa	NCU06558	XP_962265.1
Pan troglodytes (chimpanzee)	DDO	XP_003311477.1
Gallus gallus (chicken)	DDO	XP_004940363.1
Canis lupus familiaris (dog)	DDO	XP_532262.2
Mus musculus (house mouse)	Ddo	NP_081718.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG12338 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG12338 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa12904	NM_136759.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG12338), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa12904	NM_001299363.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG12338), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG12338 ( NM_001299363.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001286292.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG12338), mRNA.

Price & Availability↑

CloneID	OFa12904
Clone ID Related Accession (Same CDS sequence)	NM_001299363.1 , NM_136759.3
Accession Version	NM_001299363.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1008bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCATTTCG GAGTCTTGGG AAGCGGTATC ATTGGTCTTA CGACCGCCTT AGAACTCCAG 
AAGGAGTTTC CCACAGCAAG GGTTTCCGTG ATTGCGGATC GGTTTAACGA GGACACCGTC 
AGCTATGTGG CGGCTGGAAT TTTCCGACCT GGAACCAGCT TTATGGGCCC CACCCAGAAA 
ATTACGCAAC AATGGATGAC CGATGCCTTC AACTACTGGG ATGAGCTGCG TCGCTCCAAG 
GAGGCTCCTC TGGCGGGCGT GTGCCAATTA TCCGGCTATA TTTACTCCCG CACCTCCCCC 
TCCATCGTAC GGAACCACTT TATTGAGAAA CTATTGCCCG TCTACCGAAG AGCCACCGAG 
GAGGAACTGA GGCTATGCAA CGGCGGCTGG AAGTACGGAT CCTTCTTCAC CACATGCCTA 
ACGGAAAGCC GCCTCTTCTT GCCCTATGCC ACTAAAAAAT TCCTGGAGAA CGGAGGAGAG 
GTTGTCCGTC AGCATGTGAA CAGCTTTTTC GAAGTGCCGC AGAACATTGA CTTGCTCCTT 
AACTGCACCG GAATGGGAGC CAAGGAGTTG TGTGGGGACC AGCACTTGGT TCCCATTCGG 
GGTCAAGTGC TCAAAGTGCG TGCTCCCTGG GTAAAGACGG CTTTCTACGG CGATTACGAC 
ACCTACGTTC TTCCCGGATT TGAGACTGTG ACCCTGGGAG GATGTCGCCA ATTCGACAGC 
TACAACACCG AGTGGTGCAA ATACGATAGC ATGGCCATTC GAGAGCGTTG CTACGATTTG 
CTGCCCAGTC TCCGGAAAGC GGAGATCGTG CGGGAATGTG TTGGTCTGCG GCCACACCGC 
TCCGTCGTTC GGGTGGAGCC AGAACTGATC ACGAATCCGG AAGGCAGGCG GCTGAAGGTA 
GTCCACAACT ACGGCCACGG CGGCTACGGT GTGACCACGG CTCCTGGAAC GGCTATGTAC 
GCAGTTCGAT TGGTACGCGA TCTACTAGCG GGAAACAGTA AACTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001286292.1
CDS	289..1296
Translation	MHFGVLGSGIIGLTTALELQKEFPTARVSVIADRFNEDTVSYVAAGIFRPGTSFMGPTQKITQQWMTDAFNYWDELRRSKEAPLAGVCQLSGYIYSRTSPSIVRNHFIEKLLPVYRRATEEELRLCNGGWKYGSFFTTCLTESRLFLPYATKKFLENGGEVVRQHVNSFFEVPQNIDLLLNCTGMGAKELCGDQHLVPIRGQVLKVRAPWVKTAFYGDYDTYVLPGFETVTLGGCRQFDSYNTEWCKYDSMAIRERCYDLLPSLRKAEIVRECVGLRPHRSVVRVEPELITNPEGRRLKVVHNYGHGGYGVTTAPGTAMYAVRLVRDLLAGNSKL

Target ORF information:

RefSeq Version	NM_001299363.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG12338), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001299363.1

ORF Insert Sequence:

ATGCATTTCG GAGTCTTGGG AAGCGGTATC ATTGGTCTTA CGACCGCCTT AGAACTCCAG 
AAGGAGTTTC CCACAGCAAG GGTTTCCGTG ATTGCGGATC GGTTTAACGA GGACACCGTC 
AGCTATGTGG CGGCTGGAAT TTTCCGACCT GGAACCAGCT TTATGGGCCC CACCCAGAAA 
ATTACGCAAC AATGGATGAC CGATGCCTTC AACTACTGGG ATGAGCTGCG TCGCTCCAAG 
GAGGCTCCTC TGGCGGGCGT GTGCCAATTA TCCGGCTATA TTTACTCCCG CACCTCCCCC 
TCCATCGTAC GGAACCACTT TATTGAGAAA CTATTGCCCG TCTACCGAAG AGCCACCGAG 
GAGGAACTGA GGCTATGCAA CGGCGGCTGG AAGTACGGAT CCTTCTTCAC CACATGCCTA 
ACGGAAAGCC GCCTCTTCTT GCCCTATGCC ACTAAAAAAT TCCTGGAGAA CGGAGGAGAG 
GTTGTCCGTC AGCATGTGAA CAGCTTTTTC GAAGTGCCGC AGAACATTGA CTTGCTCCTT 
AACTGCACCG GAATGGGAGC CAAGGAGTTG TGTGGGGACC AGCACTTGGT TCCCATTCGG 
GGTCAAGTGC TCAAAGTGCG TGCTCCCTGG GTAAAGACGG CTTTCTACGG CGATTACGAC 
ACCTACGTTC TTCCCGGATT TGAGACTGTG ACCCTGGGAG GATGTCGCCA ATTCGACAGC 
TACAACACCG AGTGGTGCAA ATACGATAGC ATGGCCATTC GAGAGCGTTG CTACGATTTG 
CTGCCCAGTC TCCGGAAAGC GGAGATCGTG CGGGAATGTG TTGGTCTGCG GCCACACCGC 
TCCGTCGTTC GGGTGGAGCC AGAACTGATC ACGAATCCGG AAGGCAGGCG GCTGAAGGTA 
GTCCACAACT ACGGCCACGG CGGCTACGGT GTGACCACGG CTCCTGGAAC GGCTATGTAC 
GCAGTTCGAT TGGTACGCGA TCTACTAGCG GGAAACAGTA AACTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG12338 ( NM_136759.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_610603.2 Drosophila melanogaster uncharacterized protein, transcript variant A (CG12338), mRNA.

Price & Availability↑

CloneID	OFa12904
Clone ID Related Accession (Same CDS sequence)	NM_001299363.1 , NM_136759.3
Accession Version	NM_136759.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1008bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_136759.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCATTTCG GAGTCTTGGG AAGCGGTATC ATTGGTCTTA CGACCGCCTT AGAACTCCAG 
AAGGAGTTTC CCACAGCAAG GGTTTCCGTG ATTGCGGATC GGTTTAACGA GGACACCGTC 
AGCTATGTGG CGGCTGGAAT TTTCCGACCT GGAACCAGCT TTATGGGCCC CACCCAGAAA 
ATTACGCAAC AATGGATGAC CGATGCCTTC AACTACTGGG ATGAGCTGCG TCGCTCCAAG 
GAGGCTCCTC TGGCGGGCGT GTGCCAATTA TCCGGCTATA TTTACTCCCG CACCTCCCCC 
TCCATCGTAC GGAACCACTT TATTGAGAAA CTATTGCCCG TCTACCGAAG AGCCACCGAG 
GAGGAACTGA GGCTATGCAA CGGCGGCTGG AAGTACGGAT CCTTCTTCAC CACATGCCTA 
ACGGAAAGCC GCCTCTTCTT GCCCTATGCC ACTAAAAAAT TCCTGGAGAA CGGAGGAGAG 
GTTGTCCGTC AGCATGTGAA CAGCTTTTTC GAAGTGCCGC AGAACATTGA CTTGCTCCTT 
AACTGCACCG GAATGGGAGC CAAGGAGTTG TGTGGGGACC AGCACTTGGT TCCCATTCGG 
GGTCAAGTGC TCAAAGTGCG TGCTCCCTGG GTAAAGACGG CTTTCTACGG CGATTACGAC 
ACCTACGTTC TTCCCGGATT TGAGACTGTG ACCCTGGGAG GATGTCGCCA ATTCGACAGC 
TACAACACCG AGTGGTGCAA ATACGATAGC ATGGCCATTC GAGAGCGTTG CTACGATTTG 
CTGCCCAGTC TCCGGAAAGC GGAGATCGTG CGGGAATGTG TTGGTCTGCG GCCACACCGC 
TCCGTCGTTC GGGTGGAGCC AGAACTGATC ACGAATCCGG AAGGCAGGCG GCTGAAGGTA 
GTCCACAACT ACGGCCACGG CGGCTACGGT GTGACCACGG CTCCTGGAAC GGCTATGTAC 
GCAGTTCGAT TGGTACGCGA TCTACTAGCG GGAAACAGTA AACTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_610603.2
CDS	58..1065
Translation	MHFGVLGSGIIGLTTALELQKEFPTARVSVIADRFNEDTVSYVAAGIFRPGTSFMGPTQKITQQWMTDAFNYWDELRRSKEAPLAGVCQLSGYIYSRTSPSIVRNHFIEKLLPVYRRATEEELRLCNGGWKYGSFFTTCLTESRLFLPYATKKFLENGGEVVRQHVNSFFEVPQNIDLLLNCTGMGAKELCGDQHLVPIRGQVLKVRAPWVKTAFYGDYDTYVLPGFETVTLGGCRQFDSYNTEWCKYDSMAIRERCYDLLPSLRKAEIVRECVGLRPHRSVVRVEPELITNPEGRRLKVVHNYGHGGYGVTTAPGTAMYAVRLVRDLLAGNSKL

Target ORF information:

RefSeq Version	NM_136759.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG12338), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_136759.3

ORF Insert Sequence:

ATGCATTTCG GAGTCTTGGG AAGCGGTATC ATTGGTCTTA CGACCGCCTT AGAACTCCAG 
AAGGAGTTTC CCACAGCAAG GGTTTCCGTG ATTGCGGATC GGTTTAACGA GGACACCGTC 
AGCTATGTGG CGGCTGGAAT TTTCCGACCT GGAACCAGCT TTATGGGCCC CACCCAGAAA 
ATTACGCAAC AATGGATGAC CGATGCCTTC AACTACTGGG ATGAGCTGCG TCGCTCCAAG 
GAGGCTCCTC TGGCGGGCGT GTGCCAATTA TCCGGCTATA TTTACTCCCG CACCTCCCCC 
TCCATCGTAC GGAACCACTT TATTGAGAAA CTATTGCCCG TCTACCGAAG AGCCACCGAG 
GAGGAACTGA GGCTATGCAA CGGCGGCTGG AAGTACGGAT CCTTCTTCAC CACATGCCTA 
ACGGAAAGCC GCCTCTTCTT GCCCTATGCC ACTAAAAAAT TCCTGGAGAA CGGAGGAGAG 
GTTGTCCGTC AGCATGTGAA CAGCTTTTTC GAAGTGCCGC AGAACATTGA CTTGCTCCTT 
AACTGCACCG GAATGGGAGC CAAGGAGTTG TGTGGGGACC AGCACTTGGT TCCCATTCGG 
GGTCAAGTGC TCAAAGTGCG TGCTCCCTGG GTAAAGACGG CTTTCTACGG CGATTACGAC 
ACCTACGTTC TTCCCGGATT TGAGACTGTG ACCCTGGGAG GATGTCGCCA ATTCGACAGC 
TACAACACCG AGTGGTGCAA ATACGATAGC ATGGCCATTC GAGAGCGTTG CTACGATTTG 
CTGCCCAGTC TCCGGAAAGC GGAGATCGTG CGGGAATGTG TTGGTCTGCG GCCACACCGC 
TCCGTCGTTC GGGTGGAGCC AGAACTGATC ACGAATCCGG AAGGCAGGCG GCTGAAGGTA 
GTCCACAACT ACGGCCACGG CGGCTACGGT GTGACCACGG CTCCTGGAAC GGCTATGTAC 
GCAGTTCGAT TGGTACGCGA TCTACTAGCG GGAAACAGTA AACTGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG12338 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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