CG3436 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG3436
Entrez Gene ID	33180
Full Name	CG3436 gene product from transcript CG3436-RC
Synonyms	Dmel\CG3436
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 21B3-21B3

mRNA and Protein(s)

mRNA	Protein	Name
NM_134657.3	NP_608501.1	uncharacterized protein, isoform A
NM_001298614.1	NP_001285543.1	uncharacterized protein, isoform C

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	SNRNP40	XP_003307985.1
	SNRNP40	XP_002802329.1
Bos taurus (cattle)	SNRNP40	NP_001039847.1
Danio rerio (zebrafish)	snrnp40	NP_956616.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009506	XP_310190.3
Neurospora crassa	NCU05797	XP_960057.1
Oryza sativa (rice)	Os06g0653800	NP_001058241.1
Xenopus tropicalis (tropical clawed frog)	snrnp40	NP_001025544.1
Canis lupus familiaris (dog)	SNRNP40	XP_854730.1
Caenorhabditis elegans (roundworm)	C18E3.5	NP_491325.1
Homo sapiens (human)	SNRNP40	NP_004805.2
Mus musculus (house mouse)	Snrnp40	NP_079921.2
Gallus gallus (chicken)	SNRNP40	NP_001006308.1
Drosophila melanogaster (fruit fly)	CG3436	NP_608501.1
Magnaporthe oryzae (rice blast fungus)	MGG_04693	XP_003710838.1
Arabidopsis thaliana (thale cress)	AT2G43770	NP_181905.1
Rattus norvegicus (Norway rat)	Snrnp40	NP_001128028.1
Caenorhabditis elegans (roundworm)	F08G12.2	NP_509886.1
Schizosaccharomyces pombe (fission yeast)	spf38	NP_596835.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG3436 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG3436 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa15854	NM_001298614.1 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant C (CG3436), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa15854	NM_134657.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3436), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG3436 ( NM_134657.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_608501.1 Drosophila melanogaster uncharacterized protein, transcript variant A (CG3436), mRNA.

Price & Availability↑

CloneID	OFa15854
Clone ID Related Accession (Same CDS sequence)	NM_134657.3 , NM_001298614.1
Accession Version	NM_134657.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1044bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_134657.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGGTACCA AAAGACCCAA TAATAGCGTA ATTTTGGCCC AAGAGGCAAA GCGTAGCAAA 
AATGATCTGA TGGCCTACAC AAACAGGGAC AAAGCGCTCC TTGAATCGGG AGTGAGGCGT 
ACCTCAAACC TGCAGGCGCC CATAATGCAA TTAGAAGGAC ATGAGGGAGA GATTTTCACA 
GCGGAATTCC ATCCCGAGGG GGAGTTATTG CTTTCTTCTG GGTTCGATAG GCAAATCTAC 
ATCTGGCAAG TGTACGAAGA CTGCGAGAAT GTGATGGCCA TGTCGGGACA CAGCGGTGCT 
GTTATGGAAG CTCACTTTAC GCCGGATGGA TCGCACATTT TTACCTGCTC CACTGATAAA 
ACTCTGGCCT TTTGGGACAT AGCCACGGGC CAGCGGCAAC GGCGGTTCAA GGGGCATGGC 
AACTTCGTGA ACAGCGTTCA GGGCTCGCGT AGGGGTCAAC AGCTCCTCTG CTCGGGAAGC 
GATGATCGCA CCATAAAAAT CTGGGACGCC AGGAAAAAAC ACGCGGCACA CACTTTGGAA 
TCCCCTTTTC AAGTCACAGC TGTTTGTTTT GGTGACACTG GAGAACAAGT AATTAGCGGC 
GGGATCGACA ACGAAGTCAA AATCTGGGAC ATTCGAAAAC AGGCTGTCTT GCACCATCTG 
CGAGGGCATT CGGATACGAT TACCGGAATG TCCTTGTCCC CCGAAGGAGA CTTTATCTTG 
ACAAATGCCA TGGATAACAC CTTGAGGGTG TGGGACGTGA GACCTTATGC ACCCGGGGAA 
AGATGTGTGA AGGTATTCCA AGGCCATCAG CACAATTTTG AGAAGAATCT GCTGAGATGC 
GCTTGGTCGC CGGGAAGCGA TAAAATAACA TCGGGTTCCG CCGATCGGCA TGTCTATATT 
TGGGATGTAA ATACAAGGAG AATTCTTTAC AAGCTGCCCG GACACAATGG CAGTGTCAAT 
GCCGTGGATT TCAGCCCAAA AGAACCCCTG ATTCTATCTG GATCCAGCGA TAAGACTTTG 
TATCTGGGAG AGATCGATGA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_608501.1
CDS	93..1136
Translation	MGTKRPNNSVILAQEAKRSKNDLMAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEIDE

Target ORF information:

RefSeq Version	NM_134657.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant A (CG3436), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_134657.3

ORF Insert Sequence:

ATGGGTACCA AAAGACCCAA TAATAGCGTA ATTTTGGCCC AAGAGGCAAA GCGTAGCAAA 
AATGATCTGA TGGCCTACAC AAACAGGGAC AAAGCGCTCC TTGAATCGGG AGTGAGGCGT 
ACCTCAAACC TGCAGGCGCC CATAATGCAA TTAGAAGGAC ATGAGGGAGA GATTTTCACA 
GCGGAATTCC ATCCCGAGGG GGAGTTATTG CTTTCTTCTG GGTTCGATAG GCAAATCTAC 
ATCTGGCAAG TGTACGAAGA CTGCGAGAAT GTGATGGCCA TGTCGGGACA CAGCGGTGCT 
GTTATGGAAG CTCACTTTAC GCCGGATGGA TCGCACATTT TTACCTGCTC CACTGATAAA 
ACTCTGGCCT TTTGGGACAT AGCCACGGGC CAGCGGCAAC GGCGGTTCAA GGGGCATGGC 
AACTTCGTGA ACAGCGTTCA GGGCTCGCGT AGGGGTCAAC AGCTCCTCTG CTCGGGAAGC 
GATGATCGCA CCATAAAAAT CTGGGACGCC AGGAAAAAAC ACGCGGCACA CACTTTGGAA 
TCCCCTTTTC AAGTCACAGC TGTTTGTTTT GGTGACACTG GAGAACAAGT AATTAGCGGC 
GGGATCGACA ACGAAGTCAA AATCTGGGAC ATTCGAAAAC AGGCTGTCTT GCACCATCTG 
CGAGGGCATT CGGATACGAT TACCGGAATG TCCTTGTCCC CCGAAGGAGA CTTTATCTTG 
ACAAATGCCA TGGATAACAC CTTGAGGGTG TGGGACGTGA GACCTTATGC ACCCGGGGAA 
AGATGTGTGA AGGTATTCCA AGGCCATCAG CACAATTTTG AGAAGAATCT GCTGAGATGC 
GCTTGGTCGC CGGGAAGCGA TAAAATAACA TCGGGTTCCG CCGATCGGCA TGTCTATATT 
TGGGATGTAA ATACAAGGAG AATTCTTTAC AAGCTGCCCG GACACAATGG CAGTGTCAAT 
GCCGTGGATT TCAGCCCAAA AGAACCCCTG ATTCTATCTG GATCCAGCGA TAAGACTTTG 
TATCTGGGAG AGATCGATGA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG3436 ( NM_001298614.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001285543.1 Drosophila melanogaster uncharacterized protein, transcript variant C (CG3436), mRNA.

Price & Availability↑

CloneID	OFa15854
Clone ID Related Accession (Same CDS sequence)	NM_134657.3 , NM_001298614.1
Accession Version	NM_001298614.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1044bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGGTACCA AAAGACCCAA TAATAGCGTA ATTTTGGCCC AAGAGGCAAA GCGTAGCAAA 
AATGATCTGA TGGCCTACAC AAACAGGGAC AAAGCGCTCC TTGAATCGGG AGTGAGGCGT 
ACCTCAAACC TGCAGGCGCC CATAATGCAA TTAGAAGGAC ATGAGGGAGA GATTTTCACA 
GCGGAATTCC ATCCCGAGGG GGAGTTATTG CTTTCTTCTG GGTTCGATAG GCAAATCTAC 
ATCTGGCAAG TGTACGAAGA CTGCGAGAAT GTGATGGCCA TGTCGGGACA CAGCGGTGCT 
GTTATGGAAG CTCACTTTAC GCCGGATGGA TCGCACATTT TTACCTGCTC CACTGATAAA 
ACTCTGGCCT TTTGGGACAT AGCCACGGGC CAGCGGCAAC GGCGGTTCAA GGGGCATGGC 
AACTTCGTGA ACAGCGTTCA GGGCTCGCGT AGGGGTCAAC AGCTCCTCTG CTCGGGAAGC 
GATGATCGCA CCATAAAAAT CTGGGACGCC AGGAAAAAAC ACGCGGCACA CACTTTGGAA 
TCCCCTTTTC AAGTCACAGC TGTTTGTTTT GGTGACACTG GAGAACAAGT AATTAGCGGC 
GGGATCGACA ACGAAGTCAA AATCTGGGAC ATTCGAAAAC AGGCTGTCTT GCACCATCTG 
CGAGGGCATT CGGATACGAT TACCGGAATG TCCTTGTCCC CCGAAGGAGA CTTTATCTTG 
ACAAATGCCA TGGATAACAC CTTGAGGGTG TGGGACGTGA GACCTTATGC ACCCGGGGAA 
AGATGTGTGA AGGTATTCCA AGGCCATCAG CACAATTTTG AGAAGAATCT GCTGAGATGC 
GCTTGGTCGC CGGGAAGCGA TAAAATAACA TCGGGTTCCG CCGATCGGCA TGTCTATATT 
TGGGATGTAA ATACAAGGAG AATTCTTTAC AAGCTGCCCG GACACAATGG CAGTGTCAAT 
GCCGTGGATT TCAGCCCAAA AGAACCCCTG ATTCTATCTG GATCCAGCGA TAAGACTTTG 
TATCTGGGAG AGATCGATGA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001285543.1
CDS	213..1256
Translation	MGTKRPNNSVILAQEAKRSKNDLMAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEIDE

Target ORF information:

RefSeq Version	NM_001298614.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant C (CG3436), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001298614.1

ORF Insert Sequence:

ATGGGTACCA AAAGACCCAA TAATAGCGTA ATTTTGGCCC AAGAGGCAAA GCGTAGCAAA 
AATGATCTGA TGGCCTACAC AAACAGGGAC AAAGCGCTCC TTGAATCGGG AGTGAGGCGT 
ACCTCAAACC TGCAGGCGCC CATAATGCAA TTAGAAGGAC ATGAGGGAGA GATTTTCACA 
GCGGAATTCC ATCCCGAGGG GGAGTTATTG CTTTCTTCTG GGTTCGATAG GCAAATCTAC 
ATCTGGCAAG TGTACGAAGA CTGCGAGAAT GTGATGGCCA TGTCGGGACA CAGCGGTGCT 
GTTATGGAAG CTCACTTTAC GCCGGATGGA TCGCACATTT TTACCTGCTC CACTGATAAA 
ACTCTGGCCT TTTGGGACAT AGCCACGGGC CAGCGGCAAC GGCGGTTCAA GGGGCATGGC 
AACTTCGTGA ACAGCGTTCA GGGCTCGCGT AGGGGTCAAC AGCTCCTCTG CTCGGGAAGC 
GATGATCGCA CCATAAAAAT CTGGGACGCC AGGAAAAAAC ACGCGGCACA CACTTTGGAA 
TCCCCTTTTC AAGTCACAGC TGTTTGTTTT GGTGACACTG GAGAACAAGT AATTAGCGGC 
GGGATCGACA ACGAAGTCAA AATCTGGGAC ATTCGAAAAC AGGCTGTCTT GCACCATCTG 
CGAGGGCATT CGGATACGAT TACCGGAATG TCCTTGTCCC CCGAAGGAGA CTTTATCTTG 
ACAAATGCCA TGGATAACAC CTTGAGGGTG TGGGACGTGA GACCTTATGC ACCCGGGGAA 
AGATGTGTGA AGGTATTCCA AGGCCATCAG CACAATTTTG AGAAGAATCT GCTGAGATGC 
GCTTGGTCGC CGGGAAGCGA TAAAATAACA TCGGGTTCCG CCGATCGGCA TGTCTATATT 
TGGGATGTAA ATACAAGGAG AATTCTTTAC AAGCTGCCCG GACACAATGG CAGTGTCAAT 
GCCGTGGATT TCAGCCCAAA AGAACCCCTG ATTCTATCTG GATCCAGCGA TAAGACTTTG 
TATCTGGGAG AGATCGATGA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG3436 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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