RunxB cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	RunxB
Entrez Gene ID	33051
Full Name	Runt related B
Synonyms	CG15454,CG15455,CG42267,Dmel\CG42267,Dmel_CG15454,Dmel_CG15455
General protein information	Preferred Names Runt related B Names CG42267 gene product from transcript CG42267-RC CG42267-PC RunxB-PC runt related B
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: X Map Location: 19D3-19D3

mRNA and Protein(s)

mRNA	Protein	Name
NM_001272816.2	NP_001259745.1	runt related B

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following RunxB gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RunxB cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa02210	NM_001272816.2 Latest version!	Drosophila melanogaster runt related B (RunxB), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

RunxB ( NM_001272816.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001259745.1 Drosophila melanogaster runt related B (RunxB), mRNA.

Price & Availability↑

CloneID	OFa02210
Clone ID Related Accession (Same CDS sequence)	NM_001272816.2
Accession Version	NM_001272816.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1992bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	runt related B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jul 15, 2014 this sequence version replaced NM_001272816.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCACATTT CTGCTGAGGT CAGTTCGACC ACCTCAAATC AAATACAGCA ACAGCAGCAG 
CAACATCAGC AGCAGCAGCA ACATCAGTTG TTGCAGCACC AGCAACAACA GACAGCAACA 
ACGACCACAA CGAAGCGGCG GAATGCTGAG TCCTCTGCCA GCAGCAATAA CAACAACAAC 
AACAATACCA GCACCACCAA CAATAATAAT ACTAACAATA ACAACAACAG CACCACGAAC 
AACAACAACA ACAACAATAA TAATAATGTT AAAACAAAGC CCGTGGACAC GAGTCCCTAC 
TTAACCCCCG AGAATCTCAT CGAGCGCACC GTCGACGTCC TGCTCGCCGA ACATCCTGGC 
GAGCTGGTCA AGACGGGATC TCCACATGTG GTCTGCACCA CATTGCCCAC GCACTGGCGC 
TCAAACAAAA CTCTACCGAT CGCCTTCAAG GTTTTGGCAC TGGGCGAGGT CATGGATGGC 
ACTATAGTCA CCATTCGAGC CGGAAACGAT GAGAACTTCT GCGGGGAACT GAGAAACTGC 
ACGGCCGTGA TGAAAAATCA GGTGGCCAAG TTCAATGATC TGCGGTTCGT GGGCAGAAGC 
GGAAGGGGCA AGAGCTTCAC ACTGACGATT GTCATCTCAA CGAACCCCAT CCAGATAGCC 
ACCTACACCA AGGCCATCAA GGTGACCGTG GATGGGCCGA GGGAACCAAG ATCGAAGGTG 
CGACACCAGG GATTCCATCC GTTCGCCTTT GGGCCGCAAC GTTTCGGACC GGATCCACTT 
ATGGCCGGAT TGCCCTTCAA GTTGCCAGGA TTCGCACACC ATCTGGTGGG GATGCACAGC 
CACCTTCATG CGCCCGACTG GCGCGCCCAC ATGGCCTTGG GCGGTCGCCC AGCGGCCTTT 
ACCGCCGCCC CCTTTTTTGG CCACCATGCG GCCGCTTTTC CCACCGCCAG TGGTCTGCGT 
GGATTGAGTG GGGACAGCCA GCAGCACCAG CAGCAGCAGC AGCAGCACCA GTTGGCCACT 
GTGGGGGCGG CACATAGCAC CACCAGTCCG GAGGGATCTC CGACCACCAC AACCACGAGC 
GGTACGCAGC TTAGCGCCTT TGTCCAGCCA CCAATGACGT CATCGCCACC GCCGGTCACC 
AGTTTGCAGC ATGACAATAA TAATAACAAC AGCAACAACA ACAACAGCAG CAGTCACATT 
GATGCGGGTT TCGAAAGCGA CAGCATTTCG GTAACAGGAT CGCCGCGAAA AAGCCTCGGC 
TCCCCTTTGA CCCACGACGA GGAGGAGGCA GAGGCAGAAG CTGAAGCTGA AGCAGAAGCA 
GAGGCGGAGG CTGAGGAAGC GGAGGTGGGC GGATTAAGTC GGAATGGTGG CGGCATTCAG 
GGCCCGCTGC ACAGCGAAAG TTCCCCGGGC TCGGGTGGCG CCTTCACCGC CCTCATCCAG 
CGAAGTGGCA AAAATCCCAC CGAATTATTC GGCGGCTTTG CCGCTGCAGG TGGAAATCAC 
TTTGCACCCA GCGGTCATAG TTTCAATCCC GCTCTGGCCG CCCAACTCTT CCTGCAAAGT 
CCCCTCTTGC CGCAATCCAG CCAGTGGCTA TATACCCAGC TATATGGCAG CTACAGTGAT 
CTACCCTGGC TGAGGAACGC GGCGGCTGCG GCGGCCGCGA ATATAAATCC CGGCCAGGAG 
AACTCCGGCA TACCGCCATT GGGCAGCAAT CCCGATCACG ATGGCGTTAA CCTGATCAAG 
CGCTGTGTCA CACTGATAAC CCACAATCCG CCGGACGCGG AGAACGCCAA TCCAAACGCC 
TCGCCGCCGG TCAGCTCCAC CAGGCGATCG CCCTCCCCCG TGGAAACCAT CGATCTGGAC 
GACGTGAGCA CCACATCGCG CTCGGCCAGC GGTTCAAGCG GCCATGGCGG CGGAGTCGGT 
GGTGGTGGTG CAGTCGGACC CATTAGGACG CGCACACCCA AACCGTCGGC GGATGTCTGG 
CGTCCCTACT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001259745.1
CDS	280..2271
Translation	MHISAEVSSTTSNQIQQQQQQHQQQQQHQLLQHQQQQTATTTTTKRRNAESSASSNNNNNNNTSTTNNNNTNNNNNSTTNNNNNNNNNNVKTKPVDTSPYLTPENLIERTVDVLLAEHPGELVKTGSPHVVCTTLPTHWRSNKTLPIAFKVLALGEVMDGTIVTIRAGNDENFCGELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTIVISTNPIQIATYTKAIKVTVDGPREPRSKVRHQGFHPFAFGPQRFGPDPLMAGLPFKLPGFAHHLVGMHSHLHAPDWRAHMALGGRPAAFTAAPFFGHHAAAFPTASGLRGLSGDSQQHQQQQQQHQLATVGAAHSTTSPEGSPTTTTTSGTQLSAFVQPPMTSSPPPVTSLQHDNNNNNSNNNNSSSHIDAGFESDSISVTGSPRKSLGSPLTHDEEEAEAEAEAEAEAEAEAEEAEVGGLSRNGGGIQGPLHSESSPGSGGAFTALIQRSGKNPTELFGGFAAAGGNHFAPSGHSFNPALAAQLFLQSPLLPQSSQWLYTQLYGSYSDLPWLRNAAAAAAANINPGQENSGIPPLGSNPDHDGVNLIKRCVTLITHNPPDAENANPNASPPVSSTRRSPSPVETIDLDDVSTTSRSASGSSGHGGGVGGGGAVGPIRTRTPKPSADVWRPY

Target ORF information:

RefSeq Version	NM_001272816.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster runt related B (RunxB), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001272816.2

ORF Insert Sequence:

ATGCACATTT CTGCTGAGGT CAGTTCGACC ACCTCAAATC AAATACAGCA ACAGCAGCAG 
CAACATCAGC AGCAGCAGCA ACATCAGTTG TTGCAGCACC AGCAACAACA GACAGCAACA 
ACGACCACAA CGAAGCGGCG GAATGCTGAG TCCTCTGCCA GCAGCAATAA CAACAACAAC 
AACAATACCA GCACCACCAA CAATAATAAT ACTAACAATA ACAACAACAG CACCACGAAC 
AACAACAACA ACAACAATAA TAATAATGTT AAAACAAAGC CCGTGGACAC GAGTCCCTAC 
TTAACCCCCG AGAATCTCAT CGAGCGCACC GTCGACGTCC TGCTCGCCGA ACATCCTGGC 
GAGCTGGTCA AGACGGGATC TCCACATGTG GTCTGCACCA CATTGCCCAC GCACTGGCGC 
TCAAACAAAA CTCTACCGAT CGCCTTCAAG GTTTTGGCAC TGGGCGAGGT CATGGATGGC 
ACTATAGTCA CCATTCGAGC CGGAAACGAT GAGAACTTCT GCGGGGAACT GAGAAACTGC 
ACGGCCGTGA TGAAAAATCA GGTGGCCAAG TTCAATGATC TGCGGTTCGT GGGCAGAAGC 
GGAAGGGGCA AGAGCTTCAC ACTGACGATT GTCATCTCAA CGAACCCCAT CCAGATAGCC 
ACCTACACCA AGGCCATCAA GGTGACCGTG GATGGGCCGA GGGAACCAAG ATCGAAGGTG 
CGACACCAGG GATTCCATCC GTTCGCCTTT GGGCCGCAAC GTTTCGGACC GGATCCACTT 
ATGGCCGGAT TGCCCTTCAA GTTGCCAGGA TTCGCACACC ATCTGGTGGG GATGCACAGC 
CACCTTCATG CGCCCGACTG GCGCGCCCAC ATGGCCTTGG GCGGTCGCCC AGCGGCCTTT 
ACCGCCGCCC CCTTTTTTGG CCACCATGCG GCCGCTTTTC CCACCGCCAG TGGTCTGCGT 
GGATTGAGTG GGGACAGCCA GCAGCACCAG CAGCAGCAGC AGCAGCACCA GTTGGCCACT 
GTGGGGGCGG CACATAGCAC CACCAGTCCG GAGGGATCTC CGACCACCAC AACCACGAGC 
GGTACGCAGC TTAGCGCCTT TGTCCAGCCA CCAATGACGT CATCGCCACC GCCGGTCACC 
AGTTTGCAGC ATGACAATAA TAATAACAAC AGCAACAACA ACAACAGCAG CAGTCACATT 
GATGCGGGTT TCGAAAGCGA CAGCATTTCG GTAACAGGAT CGCCGCGAAA AAGCCTCGGC 
TCCCCTTTGA CCCACGACGA GGAGGAGGCA GAGGCAGAAG CTGAAGCTGA AGCAGAAGCA 
GAGGCGGAGG CTGAGGAAGC GGAGGTGGGC GGATTAAGTC GGAATGGTGG CGGCATTCAG 
GGCCCGCTGC ACAGCGAAAG TTCCCCGGGC TCGGGTGGCG CCTTCACCGC CCTCATCCAG 
CGAAGTGGCA AAAATCCCAC CGAATTATTC GGCGGCTTTG CCGCTGCAGG TGGAAATCAC 
TTTGCACCCA GCGGTCATAG TTTCAATCCC GCTCTGGCCG CCCAACTCTT CCTGCAAAGT 
CCCCTCTTGC CGCAATCCAG CCAGTGGCTA TATACCCAGC TATATGGCAG CTACAGTGAT 
CTACCCTGGC TGAGGAACGC GGCGGCTGCG GCGGCCGCGA ATATAAATCC CGGCCAGGAG 
AACTCCGGCA TACCGCCATT GGGCAGCAAT CCCGATCACG ATGGCGTTAA CCTGATCAAG 
CGCTGTGTCA CACTGATAAC CCACAATCCG CCGGACGCGG AGAACGCCAA TCCAAACGCC 
TCGCCGCCGG TCAGCTCCAC CAGGCGATCG CCCTCCCCCG TGGAAACCAT CGATCTGGAC 
GACGTGAGCA CCACATCGCG CTCGGCCAGC GGTTCAAGCG GCCATGGCGG CGGAGTCGGT 
GGTGGTGGTG CAGTCGGACC CATTAGGACG CGCACACCCA AACCGTCGGC GGATGTCTGG 
CGTCCCTACT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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RunxB cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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