CG42458 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG42458
Entrez Gene ID	2768945
Full Name	CG42458 gene product from transcript CG42458-RA
Synonyms	CG18656,CG33277,CG33279,Dmel\CG42458,Dmel_CG33277,Dmel_CG33279,cg18656
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3L Map Location: 66A1-66A1

mRNA and Protein(s)

mRNA	Protein	Name
NM_206288.4	NP_996010.2	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG42458 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG42458 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa19609	NM_206288.4 Latest version!	Drosophila melanogaster uncharacterized protein (CG42458), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG42458 ( NM_206288.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_996010.2 Drosophila melanogaster uncharacterized protein (CG42458), mRNA.

Price & Availability↑

CloneID	OFa19609
Clone ID Related Accession (Same CDS sequence)	NM_206288.4
Accession Version	NM_206288.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2136bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_037436). On Jul 15, 2014 this sequence version replaced NM_206288.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAAGCTGT CCAAACTGTC CAACCAGACC AACTCGCAGG ATCCGCAGGC GGTCAACTCG 
CGCATCTTTG TGGGCAATCT GAATACCTTC CAGTGCTCCA AAACGGACGT GGAGCGCATG 
TTTCAGATCT ATGGTCGCCT CGCGGGCATA TCCATGCATA AGGGCTATGC CTTTGTGCAG 
TTCACCAATC CATTCGATGC TCGGAATGCC TGCCACGGCG AGGATGGCAA GACGGTCCTC 
AGCCAGACAT TAGATGTCAA CATGGTGGCC GAACCGAAAG CGCATCAGAT CGGAAGGAAA 
AGGCAGAATG TGAGCAAGAC CGGAAACGAT TGGGACTACT TCTACGACAG CTACTGCTCC 
TCGGCGCTGT TGCGCGGTGG CGGCGGTGCA GGCGGGGGCG GTTCGAATGG AGTGCGGGCC 
AAGAAGCGAA AGCGTCTGAT GACCAACGGC GGCGGTCTCG CTGTGGCCGT GCAACAGCAA 
CAACAGCAGC ATCATCACAG TGCGGCCGCG GTGGCCGCTG CTGCGGCAGC TGCCGTCCAT 
CAGCAACAGC AGCAGGTGCA GCAGCAGCAG CAACAGCAAC ACCATCAGCA GCAACAGCAA 
CAGCACCAGC AGCAGGTTGC TGCCGTTGCG ATGGCGGCCA TGGCCAATTT GTTGCCGCAG 
CAGCAGTTGC TGCTGCATCA GCAGAATCTG CTATCGAATG CGGCGGTGGC CACAACGGTA 
ACGGCGGCTC CAAGTTCCAT TCACTGGTCG CAATACAAAC AGGAGCAGCA GCACCACCCA 
CATGCGCACC ACCCGCACCA CCAGCAACCG TTCGGATTCC AGCTGAAGAG CAGCGTGGCT 
GTCCAGGCGA CGACATCGCC GCAAAATGCA AAGTCTGCAA TAATTGCTAA TCAAACGGCG 
CTCGGCGAGC CATATCCGGT TGGAGCCGCC GCCTTTGCCG CCCATCAGCA GCAACATCAG 
CATCAGCAGC AGCATCAGCA ACCGTTGCTG CAGCCGTTGA CTCTGGCATT GTCCCCACAG 
CAACCGCAGC CTCATCAGGC GGCAACGCCA CTACAATTGC ACAGCCAATT GATGCAGCAA 
CATCAACATC AGCAGCAACA GCAACAGCAG CAACAGCAAC AACAGCAGCA GCACAACCAA 
CAGCAGCAAC ATGCTCAGGA GCAATTAAGT TTGCATCAGC AATGGGGACC ATTCAAAGTC 
TACAGCAATC CGGATACATT AATCTGCGGC AATTGCCGGG AATCCTTTGG CGAGCTGTCT 
GAGTTATTGG ACCACAAGAA AAGTTATTGC AAGCTGAGGT TCACATGCAA GTGCCAGGAT 
GTTGCCTTTG CGGCAAGTGC AAAGACTCCG CCGACGAGCG CCAAATTGCT GTGCGCCGTT 
TGCAAGGATG CGTTCGTCAA TCCTTGGGAT TTGATGGTCC ACGCACAGGC CGCCCACATG 
GTTAACATTT ACGAGCTGGG CGATGATGAG GGCAGCAGCA ACAGCAATGC CACCACAGCC 
AGCAGCAACA ATGTTGCAAA TGCAGCCGTG GAGAATGGCC ATACCATCGC CGATGTGGCT 
GCCACAAAGC AGCAGATGCC ACAGATGCCG GATGCCTCAT CAACACTTAA CAAGGAGCCC 
AATAACAATA ATAAAATTAG CAACAACAAT ATCATCAGTG GGGCCATCAA TGGCCACATG 
TCGCCCTCGG GAACGGGCAT CATTATGGCA TCGGTATCTT CGGCTGAGAA TGGAATGGCC 
AGCGACATGG AGACCAACTG TCTGGACATT AAGTTTAGCC CCAGTGCCAG TCCCAAGGAG 
GCGAGTGACA TGATTACCGC CGCACCAGGC AGTGGTTCTC ATTCCCCAGT GATTCCGTTA 
CAGGATCAGC ACAGGGATGA TCTCTCCCTC GATGGACGCA TGTCGAGCAG CTCCCAGCAG 
ACCCATCACT CCGACGAACT GAACGTCAAG CTGCTGAATG GCTCCGTCTC CTCGAGGGGC 
AGCTCGCCCG GATTGGAGGC GGATGAGCCG CCGGCCACAA GGGCTTGCAT TGTCCGTACC 
TTAAGCATTG AAACAGCCGG GTCATCTACA GCGCCAACTG CCAATACTTT GAGCCTGATG 
TCCAACAGTT TAGGCCTGGC TCTCGCACCG CAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_996010.2
CDS	625..2760
Translation	MKLSKLSNQTNSQDPQAVNSRIFVGNLNTFQCSKTDVERMFQIYGRLAGISMHKGYAFVQFTNPFDARNACHGEDGKTVLSQTLDVNMVAEPKAHQIGRKRQNVSKTGNDWDYFYDSYCSSALLRGGGGAGGGGSNGVRAKKRKRLMTNGGGLAVAVQQQQQQHHHSAAAVAAAAAAAVHQQQQQVQQQQQQQHHQQQQQQHQQQVAAVAMAAMANLLPQQQLLLHQQNLLSNAAVATTVTAAPSSIHWSQYKQEQQHHPHAHHPHHQQPFGFQLKSSVAVQATTSPQNAKSAIIANQTALGEPYPVGAAAFAAHQQQHQHQQQHQQPLLQPLTLALSPQQPQPHQAATPLQLHSQLMQQHQHQQQQQQQQQQQQQQHNQQQQHAQEQLSLHQQWGPFKVYSNPDTLICGNCRESFGELSELLDHKKSYCKLRFTCKCQDVAFAASAKTPPTSAKLLCAVCKDAFVNPWDLMVHAQAAHMVNIYELGDDEGSSNSNATTASSNNVANAAVENGHTIADVAATKQQMPQMPDASSTLNKEPNNNNKISNNNIISGAINGHMSPSGTGIIMASVSSAENGMASDMETNCLDIKFSPSASPKEASDMITAAPGSGSHSPVIPLQDQHRDDLSLDGRMSSSSQQTHHSDELNVKLLNGSVSSRGSSPGLEADEPPATRACIVRTLSIETAGSSTAPTANTLSLMSNSLGLALAPQ

Target ORF information:

RefSeq Version	NM_206288.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG42458), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_206288.4

ORF Insert Sequence:

ATGAAGCTGT CCAAACTGTC CAACCAGACC AACTCGCAGG ATCCGCAGGC GGTCAACTCG 
CGCATCTTTG TGGGCAATCT GAATACCTTC CAGTGCTCCA AAACGGACGT GGAGCGCATG 
TTTCAGATCT ATGGTCGCCT CGCGGGCATA TCCATGCATA AGGGCTATGC CTTTGTGCAG 
TTCACCAATC CATTCGATGC TCGGAATGCC TGCCACGGCG AGGATGGCAA GACGGTCCTC 
AGCCAGACAT TAGATGTCAA CATGGTGGCC GAACCGAAAG CGCATCAGAT CGGAAGGAAA 
AGGCAGAATG TGAGCAAGAC CGGAAACGAT TGGGACTACT TCTACGACAG CTACTGCTCC 
TCGGCGCTGT TGCGCGGTGG CGGCGGTGCA GGCGGGGGCG GTTCGAATGG AGTGCGGGCC 
AAGAAGCGAA AGCGTCTGAT GACCAACGGC GGCGGTCTCG CTGTGGCCGT GCAACAGCAA 
CAACAGCAGC ATCATCACAG TGCGGCCGCG GTGGCCGCTG CTGCGGCAGC TGCCGTCCAT 
CAGCAACAGC AGCAGGTGCA GCAGCAGCAG CAACAGCAAC ACCATCAGCA GCAACAGCAA 
CAGCACCAGC AGCAGGTTGC TGCCGTTGCG ATGGCGGCCA TGGCCAATTT GTTGCCGCAG 
CAGCAGTTGC TGCTGCATCA GCAGAATCTG CTATCGAATG CGGCGGTGGC CACAACGGTA 
ACGGCGGCTC CAAGTTCCAT TCACTGGTCG CAATACAAAC AGGAGCAGCA GCACCACCCA 
CATGCGCACC ACCCGCACCA CCAGCAACCG TTCGGATTCC AGCTGAAGAG CAGCGTGGCT 
GTCCAGGCGA CGACATCGCC GCAAAATGCA AAGTCTGCAA TAATTGCTAA TCAAACGGCG 
CTCGGCGAGC CATATCCGGT TGGAGCCGCC GCCTTTGCCG CCCATCAGCA GCAACATCAG 
CATCAGCAGC AGCATCAGCA ACCGTTGCTG CAGCCGTTGA CTCTGGCATT GTCCCCACAG 
CAACCGCAGC CTCATCAGGC GGCAACGCCA CTACAATTGC ACAGCCAATT GATGCAGCAA 
CATCAACATC AGCAGCAACA GCAACAGCAG CAACAGCAAC AACAGCAGCA GCACAACCAA 
CAGCAGCAAC ATGCTCAGGA GCAATTAAGT TTGCATCAGC AATGGGGACC ATTCAAAGTC 
TACAGCAATC CGGATACATT AATCTGCGGC AATTGCCGGG AATCCTTTGG CGAGCTGTCT 
GAGTTATTGG ACCACAAGAA AAGTTATTGC AAGCTGAGGT TCACATGCAA GTGCCAGGAT 
GTTGCCTTTG CGGCAAGTGC AAAGACTCCG CCGACGAGCG CCAAATTGCT GTGCGCCGTT 
TGCAAGGATG CGTTCGTCAA TCCTTGGGAT TTGATGGTCC ACGCACAGGC CGCCCACATG 
GTTAACATTT ACGAGCTGGG CGATGATGAG GGCAGCAGCA ACAGCAATGC CACCACAGCC 
AGCAGCAACA ATGTTGCAAA TGCAGCCGTG GAGAATGGCC ATACCATCGC CGATGTGGCT 
GCCACAAAGC AGCAGATGCC ACAGATGCCG GATGCCTCAT CAACACTTAA CAAGGAGCCC 
AATAACAATA ATAAAATTAG CAACAACAAT ATCATCAGTG GGGCCATCAA TGGCCACATG 
TCGCCCTCGG GAACGGGCAT CATTATGGCA TCGGTATCTT CGGCTGAGAA TGGAATGGCC 
AGCGACATGG AGACCAACTG TCTGGACATT AAGTTTAGCC CCAGTGCCAG TCCCAAGGAG 
GCGAGTGACA TGATTACCGC CGCACCAGGC AGTGGTTCTC ATTCCCCAGT GATTCCGTTA 
CAGGATCAGC ACAGGGATGA TCTCTCCCTC GATGGACGCA TGTCGAGCAG CTCCCAGCAG 
ACCCATCACT CCGACGAACT GAACGTCAAG CTGCTGAATG GCTCCGTCTC CTCGAGGGGC 
AGCTCGCCCG GATTGGAGGC GGATGAGCCG CCGGCCACAA GGGCTTGCAT TGTCCGTACC 
TTAAGCATTG AAACAGCCGG GTCATCTACA GCGCCAACTG CCAATACTTT GAGCCTGATG 
TCCAACAGTT TAGGCCTGGC TCTCGCACCG CAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG42458 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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