CG5180 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG5180
Entrez Gene ID	192508
Full Name	CG5180 gene product from transcript CG5180-RC
Synonyms	BEST:LD05530,Dmel\CG5180,LD05530
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 92F1-92F1

mRNA and Protein(s)

mRNA	Protein	Name
NM_001144615.3	NP_001138087.1	uncharacterized protein, isoform B
NM_142635.2	NP_650892.2	uncharacterized protein, isoform C

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG5180 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG5180 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa07579	NM_001144615.3 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5180), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa07579	NM_142635.2 Latest version!	Drosophila melanogaster uncharacterized protein, transcript variant C (CG5180), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG5180 ( NM_001144615.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001138087.1 Drosophila melanogaster uncharacterized protein, transcript variant B (CG5180), mRNA.

Price & Availability↑

CloneID	OFa07579
Clone ID Related Accession (Same CDS sequence)	NM_001144615.3 , NM_142635.2
Accession Version	NM_001144615.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_001144615.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAACTTAG ACCTGCGTTC GTACTCACGC CACTGGCTCA CGGAGTTTAT CGAGCAGTAC 
CAAGAGGAGG AGTGCCTCTG GCAGCCCAAG CACAACGACT ACAGCAATCA CACAGCCCGT 
AACAAGTCCT ACGATCGCCT GGTGGAGAAG CTAAAAGAAG TGGAGCCCAA TCCGGACAGG 
GCGATGGTAG TAAGGAAAAT TAACTCACTG CGGTCCGCTT TTCGGCGGGA ATTCCGCAAG 
ACGAGTACCA AAGGCGACTA CGCAACGCGT TTGTGGTACT ACGACAAGCT GCTTTTCATC 
GCTGACCACA AGCCCAAGCG CCACGAACTC GGCTCCAAGC CCAAGAGAGA ACTCCATATC 
AGCTTCGACG ACGAGGAGTC AATGGAGTTC GAGGACGACT CACATCACAC GGGCACTCAG 
TCTCAGCACA TGGAGTCCAT AATACCCACG TCCCCGGACG ATGTGGAAGA AGTCGCGGCG 
ACGGCCAACA ATGTGGTCGT CAGCAGTCAG GGCGCCACTC TGAGCACCAT TTCGGTGACG 
CCCGCGGAAT GTGTGACCCT TGTCAAGAGC GAGGAGCACC AGGCGGCCGA AGCAGCGGCA 
GCCGCAGCCC AAGCACACCA GCAAATGGTA GCCCATGCAG CAGCCCAGAC CTCCATTGCG 
GCGGCGGCGG CTCAGGGACA TGCCGTGAAG GTCTTAGAGA TCACCTCCCT AGACTCCAAC 
TCCCAGCGCG AGATACAACA AGCGGTCAAT CATCTGGAGC ACCACCAGCA GCAGCTCCAC 
CTGCAGCAGA CGAATGGCCA ACATCAGGGC GTTCCCACCA TCCAGATAGG CCGCGATCAC 
TATCAGCCAT TGTTTGGCAA TGCCGGCACC ACTGCCTATA CCACCACAGC GGCTACGAGC 
ACATCGCACC GGCAAGACGA CGAGTACGAT GCCATTGGCG TGAATGTGGC GAGCAAACTG 
CGCTCCATCA ACCCGACGCA GCGGATCGTG GCCGAGAAAC TGATCAGCGA CGTTCTATTC 
AACGCACAGC TGGGCAACCT CACCGTTCAC TCGGCCCTCA CGCAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001138087.1
CDS	101..1168
Translation	MNLDLRSYSRHWLTEFIEQYQEEECLWQPKHNDYSNHTARNKSYDRLVEKLKEVEPNPDRAMVVRKINSLRSAFRREFRKTSTKGDYATRLWYYDKLLFIADHKPKRHELGSKPKRELHISFDDEESMEFEDDSHHTGTQSQHMESIIPTSPDDVEEVAATANNVVVSSQGATLSTISVTPAECVTLVKSEEHQAAEAAAAAAQAHQQMVAHAAAQTSIAAAAAQGHAVKVLEITSLDSNSQREIQQAVNHLEHHQQQLHLQQTNGQHQGVPTIQIGRDHYQPLFGNAGTTAYTTTAATSTSHRQDDEYDAIGVNVASKLRSINPTQRIVAEKLISDVLFNAQLGNLTVHSALTQ

Target ORF information:

RefSeq Version	NM_001144615.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant B (CG5180), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001144615.3

ORF Insert Sequence:

ATGAACTTAG ACCTGCGTTC GTACTCACGC CACTGGCTCA CGGAGTTTAT CGAGCAGTAC 
CAAGAGGAGG AGTGCCTCTG GCAGCCCAAG CACAACGACT ACAGCAATCA CACAGCCCGT 
AACAAGTCCT ACGATCGCCT GGTGGAGAAG CTAAAAGAAG TGGAGCCCAA TCCGGACAGG 
GCGATGGTAG TAAGGAAAAT TAACTCACTG CGGTCCGCTT TTCGGCGGGA ATTCCGCAAG 
ACGAGTACCA AAGGCGACTA CGCAACGCGT TTGTGGTACT ACGACAAGCT GCTTTTCATC 
GCTGACCACA AGCCCAAGCG CCACGAACTC GGCTCCAAGC CCAAGAGAGA ACTCCATATC 
AGCTTCGACG ACGAGGAGTC AATGGAGTTC GAGGACGACT CACATCACAC GGGCACTCAG 
TCTCAGCACA TGGAGTCCAT AATACCCACG TCCCCGGACG ATGTGGAAGA AGTCGCGGCG 
ACGGCCAACA ATGTGGTCGT CAGCAGTCAG GGCGCCACTC TGAGCACCAT TTCGGTGACG 
CCCGCGGAAT GTGTGACCCT TGTCAAGAGC GAGGAGCACC AGGCGGCCGA AGCAGCGGCA 
GCCGCAGCCC AAGCACACCA GCAAATGGTA GCCCATGCAG CAGCCCAGAC CTCCATTGCG 
GCGGCGGCGG CTCAGGGACA TGCCGTGAAG GTCTTAGAGA TCACCTCCCT AGACTCCAAC 
TCCCAGCGCG AGATACAACA AGCGGTCAAT CATCTGGAGC ACCACCAGCA GCAGCTCCAC 
CTGCAGCAGA CGAATGGCCA ACATCAGGGC GTTCCCACCA TCCAGATAGG CCGCGATCAC 
TATCAGCCAT TGTTTGGCAA TGCCGGCACC ACTGCCTATA CCACCACAGC GGCTACGAGC 
ACATCGCACC GGCAAGACGA CGAGTACGAT GCCATTGGCG TGAATGTGGC GAGCAAACTG 
CGCTCCATCA ACCCGACGCA GCGGATCGTG GCCGAGAAAC TGATCAGCGA CGTTCTATTC 
AACGCACAGC TGGGCAACCT CACCGTTCAC TCGGCCCTCA CGCAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CG5180 ( NM_142635.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_650892.2 Drosophila melanogaster uncharacterized protein, transcript variant C (CG5180), mRNA.

Price & Availability↑

CloneID	OFa07579
Clone ID Related Accession (Same CDS sequence)	NM_001144615.3 , NM_142635.2
Accession Version	NM_142635.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Nov 6, 2002 this sequence version replaced NM_142635.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAACTTAG ACCTGCGTTC GTACTCACGC CACTGGCTCA CGGAGTTTAT CGAGCAGTAC 
CAAGAGGAGG AGTGCCTCTG GCAGCCCAAG CACAACGACT ACAGCAATCA CACAGCCCGT 
AACAAGTCCT ACGATCGCCT GGTGGAGAAG CTAAAAGAAG TGGAGCCCAA TCCGGACAGG 
GCGATGGTAG TAAGGAAAAT TAACTCACTG CGGTCCGCTT TTCGGCGGGA ATTCCGCAAG 
ACGAGTACCA AAGGCGACTA CGCAACGCGT TTGTGGTACT ACGACAAGCT GCTTTTCATC 
GCTGACCACA AGCCCAAGCG CCACGAACTC GGCTCCAAGC CCAAGAGAGA ACTCCATATC 
AGCTTCGACG ACGAGGAGTC AATGGAGTTC GAGGACGACT CACATCACAC GGGCACTCAG 
TCTCAGCACA TGGAGTCCAT AATACCCACG TCCCCGGACG ATGTGGAAGA AGTCGCGGCG 
ACGGCCAACA ATGTGGTCGT CAGCAGTCAG GGCGCCACTC TGAGCACCAT TTCGGTGACG 
CCCGCGGAAT GTGTGACCCT TGTCAAGAGC GAGGAGCACC AGGCGGCCGA AGCAGCGGCA 
GCCGCAGCCC AAGCACACCA GCAAATGGTA GCCCATGCAG CAGCCCAGAC CTCCATTGCG 
GCGGCGGCGG CTCAGGGACA TGCCGTGAAG GTCTTAGAGA TCACCTCCCT AGACTCCAAC 
TCCCAGCGCG AGATACAACA AGCGGTCAAT CATCTGGAGC ACCACCAGCA GCAGCTCCAC 
CTGCAGCAGA CGAATGGCCA ACATCAGGGC GTTCCCACCA TCCAGATAGG CCGCGATCAC 
TATCAGCCAT TGTTTGGCAA TGCCGGCACC ACTGCCTATA CCACCACAGC GGCTACGAGC 
ACATCGCACC GGCAAGACGA CGAGTACGAT GCCATTGGCG TGAATGTGGC GAGCAAACTG 
CGCTCCATCA ACCCGACGCA GCGGATCGTG GCCGAGAAAC TGATCAGCGA CGTTCTATTC 
AACGCACAGC TGGGCAACCT CACCGTTCAC TCGGCCCTCA CGCAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_650892.2
CDS	277..1344
Translation	MNLDLRSYSRHWLTEFIEQYQEEECLWQPKHNDYSNHTARNKSYDRLVEKLKEVEPNPDRAMVVRKINSLRSAFRREFRKTSTKGDYATRLWYYDKLLFIADHKPKRHELGSKPKRELHISFDDEESMEFEDDSHHTGTQSQHMESIIPTSPDDVEEVAATANNVVVSSQGATLSTISVTPAECVTLVKSEEHQAAEAAAAAAQAHQQMVAHAAAQTSIAAAAAQGHAVKVLEITSLDSNSQREIQQAVNHLEHHQQQLHLQQTNGQHQGVPTIQIGRDHYQPLFGNAGTTAYTTTAATSTSHRQDDEYDAIGVNVASKLRSINPTQRIVAEKLISDVLFNAQLGNLTVHSALTQ

Target ORF information:

RefSeq Version	NM_142635.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein, transcript variant C (CG5180), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_142635.2

ORF Insert Sequence:

ATGAACTTAG ACCTGCGTTC GTACTCACGC CACTGGCTCA CGGAGTTTAT CGAGCAGTAC 
CAAGAGGAGG AGTGCCTCTG GCAGCCCAAG CACAACGACT ACAGCAATCA CACAGCCCGT 
AACAAGTCCT ACGATCGCCT GGTGGAGAAG CTAAAAGAAG TGGAGCCCAA TCCGGACAGG 
GCGATGGTAG TAAGGAAAAT TAACTCACTG CGGTCCGCTT TTCGGCGGGA ATTCCGCAAG 
ACGAGTACCA AAGGCGACTA CGCAACGCGT TTGTGGTACT ACGACAAGCT GCTTTTCATC 
GCTGACCACA AGCCCAAGCG CCACGAACTC GGCTCCAAGC CCAAGAGAGA ACTCCATATC 
AGCTTCGACG ACGAGGAGTC AATGGAGTTC GAGGACGACT CACATCACAC GGGCACTCAG 
TCTCAGCACA TGGAGTCCAT AATACCCACG TCCCCGGACG ATGTGGAAGA AGTCGCGGCG 
ACGGCCAACA ATGTGGTCGT CAGCAGTCAG GGCGCCACTC TGAGCACCAT TTCGGTGACG 
CCCGCGGAAT GTGTGACCCT TGTCAAGAGC GAGGAGCACC AGGCGGCCGA AGCAGCGGCA 
GCCGCAGCCC AAGCACACCA GCAAATGGTA GCCCATGCAG CAGCCCAGAC CTCCATTGCG 
GCGGCGGCGG CTCAGGGACA TGCCGTGAAG GTCTTAGAGA TCACCTCCCT AGACTCCAAC 
TCCCAGCGCG AGATACAACA AGCGGTCAAT CATCTGGAGC ACCACCAGCA GCAGCTCCAC 
CTGCAGCAGA CGAATGGCCA ACATCAGGGC GTTCCCACCA TCCAGATAGG CCGCGATCAC 
TATCAGCCAT TGTTTGGCAA TGCCGGCACC ACTGCCTATA CCACCACAGC GGCTACGAGC 
ACATCGCACC GGCAAGACGA CGAGTACGAT GCCATTGGCG TGAATGTGGC GAGCAAACTG 
CGCTCCATCA ACCCGACGCA GCGGATCGTG GCCGAGAAAC TGATCAGCGA CGTTCTATTC 
AACGCACAGC TGGGCAACCT CACCGTTCAC TCGGCCCTCA CGCAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG5180 cDNA ORF clone, Drosophila melanogaster(fruit fly)

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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