LOC109542018 cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle)

The following LOC109542018 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109542018 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODe46433 XM_019911043.1
Latest version!
Dendroctonus ponderosae zinc finger protein Xfin-like (LOC109542018), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $797.30
$1139.00
ODe46434 XM_019911044.1
Latest version!
Dendroctonus ponderosae zinc finger protein Xfin-like (LOC109542018), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $797.30
$1139.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID ODe46433
    Clone ID Related Accession (Same CDS sequence) XM_019911043.1
    Accession Version XM_019911043.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4092bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-01-09
    Organism Dendroctonus ponderosae(mountain pine beetle)
    Product zinc finger protein Xfin-like isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017852257.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    ATGGACAGTG TCCTAGCAAT TTCGGAAAAT TGCTTGTCTT CAGACCTTTT ACAAATGGAC 
    CTCTTATTTG AGAGCCTGAA AATGAGCTCA TCGCAAGCGG CTCCGAAATA CACCATCCAG
    CAGCTGGATG AAACCCATTT CGAGCTCATT ACCTGTGAAA CTGATCGAAC TTACAGTTTA
    CACCTAACAG AGCAGCAGGC AGAAATAGTG GATTTCGAGC ATTCAAATAA GGTCCCGGTC
    ATTAGCAGCG TCCAGAAAGA CTCAGTCATT CAGTACTCAG CAAGATCAGT TTTAAAGTCT
    GCCAACTCAA ACCAGGACGC ACCCAAAACT CACAGACCAC CGGTAGATTC TGACGACGCA
    GTTTATTACG CCTGCTGCGC TATTCAGTTT GATGGTTTGC CCGCTTTTCG AGAACATTTA
    AAGTTGCATG TGGCGGAGGA AAAATTCGGT TGCCCTCAAT GCCACGCACG CTTTTTGACA
    GAAAACAACA TGAAAATTCA CATGGTCACG AAGCACCCGG GCAATTCCAA TGTATGCCCC
    ATATGCCAGA AATCGTTCCA TCGAAAGGCC AGCTTGAAAG CTCACGTGCA AATCCATCAA
    GAGGAGGAAA TGTACCCGTG CGCACGATGT TGCGAAGAGT TACCAAGTTA CGATGCACTC
    TTGAAGCATA TGGAGCGTCA TGCAGTCATA AAGAAACCAA TAGACCCACT AATGTGCCGC
    TATTGTAAAA TCCAATTGGA AACGCCTGCA CAGTATCAAA AACATTTAGC TACACACAAG
    GACAAGAGGA AAAACGGTCA TAAAAACCGA AAGGCTAAAA AGAAACGCAC AGGAAACCAT
    CGCAAAAAGC TGATATGCCG GTTTTGTACG AAAGTGTTTC CAAAGTTCTA CCTGTTGGAG
    CGCCATGAAA GAGTGCACAC AGGCGAAAAG CCGTTTAAGT GTCACATTTG CCATAAAGGA
    TTCGCGCAAA GCAACTCGTT GAAGCTACAT CTGGACAAAC ACAAAGGCTT AAAACCCCAT
    AGTTGTCCGC TCTGCCCGGC GAAATTCACT CAGAAAGGAA ATCTTACCGC TCACATAAAT
    AAAACTCACA ACTCTCCGCA TGAGAACAAC GAAAACTATA GATGCCCCCA GTGTTCGTGT
    ATGTTCAAAA GAATCTCATC CTTGAACGGC CATATCACTA AAGCCCATGT GGATACTGGG
    AATGGGACGC CTAAAGAGCA AACGGACCCG CAAAGCGTCA TCGACAAAGT CGTCAGCGGT
    TTAAAGGAGT TGAATAATGA CCCCAACCGA TCTGTGTCCA AGCAGGACAA GGCGAAAATG
    CCCGAAGTCG ATTTAGCAGA AAACCAGGGG GATAACGGCA TTCGCCGTTA TGCGATCCGA
    CATGAAAAAA TCGGCGATGT TCGATGGTAT TTTTGCAATT ATTGCTCCAG CCGATTTAAG
    AAACCCTCGG ATCTCATCAG GCACTTTAGA ACGCATACTT TGGAGAAGCC CTTTAAGTGC
    CCAAAGTGCG AGCAAACATT TTCCTTAAAA ACCACTTTAA CGCACCACTT CAAAATCCAG
    CACTCACCAC TAGAAGTTGA ATGCAGCACG ACTGAGAGTT GTCAAGCGCC AGCAGCAGAC
    CAGGAAGTAG TCAGAACTGA CTATCTCTGC TTGGTATGTG AAAGGCGTTT TCCAACCATC
    GAGGAAAGTA AAGCGCACGG CTTGGAGCAT GAAAACGAGT TTCAAACCAG TGACAACAGC
    TTCGAGTCCA TTTCCGGAAA TTTAGCGCTT CCATCTGCAC GCTCGGCGCC CAGTGCCGTG
    GCTAATGAAA CCGCCCAGGA AAACGCGCTG CTTTGCAAAA TATGCGGTTT TAAATGTTCC
    GGAATAAACA GCTTGGCAAG CCACGTGATG CAGCACAATG ACGACAAAAA CTCTAATAAC
    GCAGCGCGTC CACAGGAATC CGAGCGAAAA ACGCAGGGGA ACATCCACAT TAAAATTTCG
    AAATTCAAAT GCTCGACTTG CGGCAAAATA TTTAAAAGTT TGGCACTGTT GACCACTCAC
    TGCGCCATTC ACAGGCGAGC GAAGCCCACT CACAAGTGTT CCTGCTGTGG CAAAGCTTTT
    AAGACCGCTG GTCGCTATCG GGCACACATG AAAAAGAGTC ATCCGCAAAA AGAATTGTCC
    TTTGTTAAGC AGCCAGATAA GTTAGCCAAC GGTGCTCAGA GCACTGCTGA CTCAGCAGCG
    AGCAATGGAA CACTTCTGAG CGTCGTCTCA GAAGAGCAAG GCTCTAATGC GCCTACCCAA
    TTGCCAGCAG ACTATGACAT GATGTGTTTT AATATTAGTG GCAATGAGAT TTTGAGCCAG
    AGCAGCCTGA TTCCGAATAT AAACCTTTAT AATTCGCTGG ACAGTTTGCA AGATTCCGCC
    ACTGTTTTCT TTAACATTGA CCCAGGTAAA CCCGACATGG TGGATCCTAA CGAAGTACTG
    AAGTATAATA AATTGGACAA ACCTCAGTTG TCTGAAACCG CCTCAGAACC TGCTCAATCT
    GATACTCCAC TTGAATCCGA TGCCCAAGAC CTTTACACCG TGAATCTGAG CGATATACCC
    ATCAGCATTA TCAGCTCTTC AGAAGAATTG GATAGCGACA TAATATCCAA CTCGCCAGTG
    CTTTGCATTA ATTGCCACAA ACTGTTCTCC AGTTGCGCGC TATTCGAAAA TCACATCTGC
    TCAGAGGAAC GAACTGCTGC AGAACAGAAC AACTTGGAAT TGATTATTCA GGATGGAACA
    ACTCATACAG TCAAAAGCCA GATTTTCAGC GAAACTGGTT CTGTGAACAA CGTGCCAGTT
    ATCCAATCTC CTGCAGTGGT GAAAAAGATG CCCGAAATAA TTTTCGAATG CCCAACGTTC
    AGCATGCCGA CGCCAGATCA AATCGTGGGC AATTTGCCCG GCGGTACAAT AAAGTCTCAA
    CTTCAGCACT ATGTCGACGA TGTGGAAGAA GCCCCGCAGA TATACTGCAA ACATTGCAAA
    TCGGCCATGC AATCAGAAGA ACAGTATCGT AAACACTTGT TTCTGCACCC AGATCTGGCT
    GACAAGATCT GCAAATACTG TTGCCGCGAT TTTAAGAAGC CTTCCGACCT GAAACGACAC
    CTGAGGACGC ACACGGGCGA GAAACCGTTT GAATGCGACA CTTGCCATAA GAAGTTTTCG
    CTTAAAGCCA CGCTACAGGG GCATATTAGG ACCCACAATA TTGCAGAAGT CCCGAAAATC
    ACCTGCAATG TTTGCAACAC GAACTTCACC ACCAAATCCT CCCTCAAACT GCATATGCTG
    AAGCATACAG GTGCCAAGCC TTATGCGTGC CAGTACTGCG AGCAGACCTT TCGTACCATA
    GGAACACGAA AAACCCATCA GAAAATTCAT TTGAATAATC AGAAAGATGC TGAAGATCCT
    GCGAAACTGG CAGGCGTTAA ACTGATTAAG TACATGGCTG AGCAGATGGA AAGCAATGAT
    TTGAGTAAAG GTCCACAAAC CGTAGATAAG GAGCCCGTAG TGCTAGTTGA CTCTCAACAG
    CTTAATTGGG TCCCGATGGA GTCCACTGAG CTTTTTCAGC AGCTGCAGCC GTATGGCTTT
    ATTATCAGCT CAGAAGCTGA GTCGAACGTA TCACGAACGG CGGACGATTT AGCAGCACTT
    GATGTAAATA GTGAGCTTCA GTTGAGTTCA ACAAAATTGC CAGATATTCA AGTTGAAGAC
    CAAAAGACAG AAAAACGCTC CCAGAAGAAA CAAGAACGAA AGCAAAGGGT GGAATGTGAC
    ATTTGCCATA AATTGTACTC ATCGAAAGAC GTTCTACGGA AGCACAAAAA ATGCTTGCAC
    GGACAAAACA AGAAATTTCC CTGTATAAAA TGTGATAAAG GCTACGATCA GCTAGATGAT
    TTGCACAAGC ATATATCGAA GTTACATTCA GGCCATCGGC CTTACACCTG CGACTATTGC
    TTGAACAGTT TTGGAGAGGA GGGTAGCTTG AAGACGCACA TTAAGAGGAT GCATCAAAAA
    TGCCCCGTGC CAGAAGAGAC TGACAGTGCG ATTTTGGAGC TCGAGTACGA CTTCTCTTCG
    CAGTATCCTT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_019766602.1
    CDS484..4575
    Translation

    Target ORF information:

    RefSeq Version XM_019911043.1
    Organism Dendroctonus ponderosae(mountain pine beetle)
    Definition Dendroctonus ponderosae zinc finger protein Xfin-like (LOC109542018), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_019911043.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    ATGGACAGTG TCCTAGCAAT TTCGGAAAAT TGCTTGTCTT CAGACCTTTT ACAAATGGAC 
    CTCTTATTTG AGAGCCTGAA AATGAGCTCA TCGCAAGCGG CTCCGAAATA CACCATCCAG
    CAGCTGGATG AAACCCATTT CGAGCTCATT ACCTGTGAAA CTGATCGAAC TTACAGTTTA
    CACCTAACAG AGCAGCAGGC AGAAATAGTG GATTTCGAGC ATTCAAATAA GGTCCCGGTC
    ATTAGCAGCG TCCAGAAAGA CTCAGTCATT CAGTACTCAG CAAGATCAGT TTTAAAGTCT
    GCCAACTCAA ACCAGGACGC ACCCAAAACT CACAGACCAC CGGTAGATTC TGACGACGCA
    GTTTATTACG CCTGCTGCGC TATTCAGTTT GATGGTTTGC CCGCTTTTCG AGAACATTTA
    AAGTTGCATG TGGCGGAGGA AAAATTCGGT TGCCCTCAAT GCCACGCACG CTTTTTGACA
    GAAAACAACA TGAAAATTCA CATGGTCACG AAGCACCCGG GCAATTCCAA TGTATGCCCC
    ATATGCCAGA AATCGTTCCA TCGAAAGGCC AGCTTGAAAG CTCACGTGCA AATCCATCAA
    GAGGAGGAAA TGTACCCGTG CGCACGATGT TGCGAAGAGT TACCAAGTTA CGATGCACTC
    TTGAAGCATA TGGAGCGTCA TGCAGTCATA AAGAAACCAA TAGACCCACT AATGTGCCGC
    TATTGTAAAA TCCAATTGGA AACGCCTGCA CAGTATCAAA AACATTTAGC TACACACAAG
    GACAAGAGGA AAAACGGTCA TAAAAACCGA AAGGCTAAAA AGAAACGCAC AGGAAACCAT
    CGCAAAAAGC TGATATGCCG GTTTTGTACG AAAGTGTTTC CAAAGTTCTA CCTGTTGGAG
    CGCCATGAAA GAGTGCACAC AGGCGAAAAG CCGTTTAAGT GTCACATTTG CCATAAAGGA
    TTCGCGCAAA GCAACTCGTT GAAGCTACAT CTGGACAAAC ACAAAGGCTT AAAACCCCAT
    AGTTGTCCGC TCTGCCCGGC GAAATTCACT CAGAAAGGAA ATCTTACCGC TCACATAAAT
    AAAACTCACA ACTCTCCGCA TGAGAACAAC GAAAACTATA GATGCCCCCA GTGTTCGTGT
    ATGTTCAAAA GAATCTCATC CTTGAACGGC CATATCACTA AAGCCCATGT GGATACTGGG
    AATGGGACGC CTAAAGAGCA AACGGACCCG CAAAGCGTCA TCGACAAAGT CGTCAGCGGT
    TTAAAGGAGT TGAATAATGA CCCCAACCGA TCTGTGTCCA AGCAGGACAA GGCGAAAATG
    CCCGAAGTCG ATTTAGCAGA AAACCAGGGG GATAACGGCA TTCGCCGTTA TGCGATCCGA
    CATGAAAAAA TCGGCGATGT TCGATGGTAT TTTTGCAATT ATTGCTCCAG CCGATTTAAG
    AAACCCTCGG ATCTCATCAG GCACTTTAGA ACGCATACTT TGGAGAAGCC CTTTAAGTGC
    CCAAAGTGCG AGCAAACATT TTCCTTAAAA ACCACTTTAA CGCACCACTT CAAAATCCAG
    CACTCACCAC TAGAAGTTGA ATGCAGCACG ACTGAGAGTT GTCAAGCGCC AGCAGCAGAC
    CAGGAAGTAG TCAGAACTGA CTATCTCTGC TTGGTATGTG AAAGGCGTTT TCCAACCATC
    GAGGAAAGTA AAGCGCACGG CTTGGAGCAT GAAAACGAGT TTCAAACCAG TGACAACAGC
    TTCGAGTCCA TTTCCGGAAA TTTAGCGCTT CCATCTGCAC GCTCGGCGCC CAGTGCCGTG
    GCTAATGAAA CCGCCCAGGA AAACGCGCTG CTTTGCAAAA TATGCGGTTT TAAATGTTCC
    GGAATAAACA GCTTGGCAAG CCACGTGATG CAGCACAATG ACGACAAAAA CTCTAATAAC
    GCAGCGCGTC CACAGGAATC CGAGCGAAAA ACGCAGGGGA ACATCCACAT TAAAATTTCG
    AAATTCAAAT GCTCGACTTG CGGCAAAATA TTTAAAAGTT TGGCACTGTT GACCACTCAC
    TGCGCCATTC ACAGGCGAGC GAAGCCCACT CACAAGTGTT CCTGCTGTGG CAAAGCTTTT
    AAGACCGCTG GTCGCTATCG GGCACACATG AAAAAGAGTC ATCCGCAAAA AGAATTGTCC
    TTTGTTAAGC AGCCAGATAA GTTAGCCAAC GGTGCTCAGA GCACTGCTGA CTCAGCAGCG
    AGCAATGGAA CACTTCTGAG CGTCGTCTCA GAAGAGCAAG GCTCTAATGC GCCTACCCAA
    TTGCCAGCAG ACTATGACAT GATGTGTTTT AATATTAGTG GCAATGAGAT TTTGAGCCAG
    AGCAGCCTGA TTCCGAATAT AAACCTTTAT AATTCGCTGG ACAGTTTGCA AGATTCCGCC
    ACTGTTTTCT TTAACATTGA CCCAGGTAAA CCCGACATGG TGGATCCTAA CGAAGTACTG
    AAGTATAATA AATTGGACAA ACCTCAGTTG TCTGAAACCG CCTCAGAACC TGCTCAATCT
    GATACTCCAC TTGAATCCGA TGCCCAAGAC CTTTACACCG TGAATCTGAG CGATATACCC
    ATCAGCATTA TCAGCTCTTC AGAAGAATTG GATAGCGACA TAATATCCAA CTCGCCAGTG
    CTTTGCATTA ATTGCCACAA ACTGTTCTCC AGTTGCGCGC TATTCGAAAA TCACATCTGC
    TCAGAGGAAC GAACTGCTGC AGAACAGAAC AACTTGGAAT TGATTATTCA GGATGGAACA
    ACTCATACAG TCAAAAGCCA GATTTTCAGC GAAACTGGTT CTGTGAACAA CGTGCCAGTT
    ATCCAATCTC CTGCAGTGGT GAAAAAGATG CCCGAAATAA TTTTCGAATG CCCAACGTTC
    AGCATGCCGA CGCCAGATCA AATCGTGGGC AATTTGCCCG GCGGTACAAT AAAGTCTCAA
    CTTCAGCACT ATGTCGACGA TGTGGAAGAA GCCCCGCAGA TATACTGCAA ACATTGCAAA
    TCGGCCATGC AATCAGAAGA ACAGTATCGT AAACACTTGT TTCTGCACCC AGATCTGGCT
    GACAAGATCT GCAAATACTG TTGCCGCGAT TTTAAGAAGC CTTCCGACCT GAAACGACAC
    CTGAGGACGC ACACGGGCGA GAAACCGTTT GAATGCGACA CTTGCCATAA GAAGTTTTCG
    CTTAAAGCCA CGCTACAGGG GCATATTAGG ACCCACAATA TTGCAGAAGT CCCGAAAATC
    ACCTGCAATG TTTGCAACAC GAACTTCACC ACCAAATCCT CCCTCAAACT GCATATGCTG
    AAGCATACAG GTGCCAAGCC TTATGCGTGC CAGTACTGCG AGCAGACCTT TCGTACCATA
    GGAACACGAA AAACCCATCA GAAAATTCAT TTGAATAATC AGAAAGATGC TGAAGATCCT
    GCGAAACTGG CAGGCGTTAA ACTGATTAAG TACATGGCTG AGCAGATGGA AAGCAATGAT
    TTGAGTAAAG GTCCACAAAC CGTAGATAAG GAGCCCGTAG TGCTAGTTGA CTCTCAACAG
    CTTAATTGGG TCCCGATGGA GTCCACTGAG CTTTTTCAGC AGCTGCAGCC GTATGGCTTT
    ATTATCAGCT CAGAAGCTGA GTCGAACGTA TCACGAACGG CGGACGATTT AGCAGCACTT
    GATGTAAATA GTGAGCTTCA GTTGAGTTCA ACAAAATTGC CAGATATTCA AGTTGAAGAC
    CAAAAGACAG AAAAACGCTC CCAGAAGAAA CAAGAACGAA AGCAAAGGGT GGAATGTGAC
    ATTTGCCATA AATTGTACTC ATCGAAAGAC GTTCTACGGA AGCACAAAAA ATGCTTGCAC
    GGACAAAACA AGAAATTTCC CTGTATAAAA TGTGATAAAG GCTACGATCA GCTAGATGAT
    TTGCACAAGC ATATATCGAA GTTACATTCA GGCCATCGGC CTTACACCTG CGACTATTGC
    TTGAACAGTT TTGGAGAGGA GGGTAGCTTG AAGACGCACA TTAAGAGGAT GCATCAAAAA
    TGCCCCGTGC CAGAAGAGAC TGACAGTGCG ATTTTGGAGC TCGAGTACGA CTTCTCTTCG
    CAGTATCCTT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODe46434
    Clone ID Related Accession (Same CDS sequence) XM_019911044.1
    Accession Version XM_019911044.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4089bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-01-09
    Organism Dendroctonus ponderosae(mountain pine beetle)
    Product zinc finger protein Xfin-like isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017852257.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    ATGGACAGTG TCCTAGCAAT TTCGGAAAAT TGCTTGTCTT CAGACCTTTT ACAAATGGAC 
    CTCTTATTTG AGAGCCTGAA AATGAGCTCA TCGCAAGCGG CTCCGAAATA CACCATCCAG
    CAGCTGGATG AAACCCATTT CGAGCTCATT ACCTGTGAAA CTGATCGAAC TTACAGTTTA
    CACCTAACAG AGCAGCAGGC AGAAATAGTG GATTTCGAGC ATTCAAATAA GGTCCCGGTC
    ATTAGCGTCC AGAAAGACTC AGTCATTCAG TACTCAGCAA GATCAGTTTT AAAGTCTGCC
    AACTCAAACC AGGACGCACC CAAAACTCAC AGACCACCGG TAGATTCTGA CGACGCAGTT
    TATTACGCCT GCTGCGCTAT TCAGTTTGAT GGTTTGCCCG CTTTTCGAGA ACATTTAAAG
    TTGCATGTGG CGGAGGAAAA ATTCGGTTGC CCTCAATGCC ACGCACGCTT TTTGACAGAA
    AACAACATGA AAATTCACAT GGTCACGAAG CACCCGGGCA ATTCCAATGT ATGCCCCATA
    TGCCAGAAAT CGTTCCATCG AAAGGCCAGC TTGAAAGCTC ACGTGCAAAT CCATCAAGAG
    GAGGAAATGT ACCCGTGCGC ACGATGTTGC GAAGAGTTAC CAAGTTACGA TGCACTCTTG
    AAGCATATGG AGCGTCATGC AGTCATAAAG AAACCAATAG ACCCACTAAT GTGCCGCTAT
    TGTAAAATCC AATTGGAAAC GCCTGCACAG TATCAAAAAC ATTTAGCTAC ACACAAGGAC
    AAGAGGAAAA ACGGTCATAA AAACCGAAAG GCTAAAAAGA AACGCACAGG AAACCATCGC
    AAAAAGCTGA TATGCCGGTT TTGTACGAAA GTGTTTCCAA AGTTCTACCT GTTGGAGCGC
    CATGAAAGAG TGCACACAGG CGAAAAGCCG TTTAAGTGTC ACATTTGCCA TAAAGGATTC
    GCGCAAAGCA ACTCGTTGAA GCTACATCTG GACAAACACA AAGGCTTAAA ACCCCATAGT
    TGTCCGCTCT GCCCGGCGAA ATTCACTCAG AAAGGAAATC TTACCGCTCA CATAAATAAA
    ACTCACAACT CTCCGCATGA GAACAACGAA AACTATAGAT GCCCCCAGTG TTCGTGTATG
    TTCAAAAGAA TCTCATCCTT GAACGGCCAT ATCACTAAAG CCCATGTGGA TACTGGGAAT
    GGGACGCCTA AAGAGCAAAC GGACCCGCAA AGCGTCATCG ACAAAGTCGT CAGCGGTTTA
    AAGGAGTTGA ATAATGACCC CAACCGATCT GTGTCCAAGC AGGACAAGGC GAAAATGCCC
    GAAGTCGATT TAGCAGAAAA CCAGGGGGAT AACGGCATTC GCCGTTATGC GATCCGACAT
    GAAAAAATCG GCGATGTTCG ATGGTATTTT TGCAATTATT GCTCCAGCCG ATTTAAGAAA
    CCCTCGGATC TCATCAGGCA CTTTAGAACG CATACTTTGG AGAAGCCCTT TAAGTGCCCA
    AAGTGCGAGC AAACATTTTC CTTAAAAACC ACTTTAACGC ACCACTTCAA AATCCAGCAC
    TCACCACTAG AAGTTGAATG CAGCACGACT GAGAGTTGTC AAGCGCCAGC AGCAGACCAG
    GAAGTAGTCA GAACTGACTA TCTCTGCTTG GTATGTGAAA GGCGTTTTCC AACCATCGAG
    GAAAGTAAAG CGCACGGCTT GGAGCATGAA AACGAGTTTC AAACCAGTGA CAACAGCTTC
    GAGTCCATTT CCGGAAATTT AGCGCTTCCA TCTGCACGCT CGGCGCCCAG TGCCGTGGCT
    AATGAAACCG CCCAGGAAAA CGCGCTGCTT TGCAAAATAT GCGGTTTTAA ATGTTCCGGA
    ATAAACAGCT TGGCAAGCCA CGTGATGCAG CACAATGACG ACAAAAACTC TAATAACGCA
    GCGCGTCCAC AGGAATCCGA GCGAAAAACG CAGGGGAACA TCCACATTAA AATTTCGAAA
    TTCAAATGCT CGACTTGCGG CAAAATATTT AAAAGTTTGG CACTGTTGAC CACTCACTGC
    GCCATTCACA GGCGAGCGAA GCCCACTCAC AAGTGTTCCT GCTGTGGCAA AGCTTTTAAG
    ACCGCTGGTC GCTATCGGGC ACACATGAAA AAGAGTCATC CGCAAAAAGA ATTGTCCTTT
    GTTAAGCAGC CAGATAAGTT AGCCAACGGT GCTCAGAGCA CTGCTGACTC AGCAGCGAGC
    AATGGAACAC TTCTGAGCGT CGTCTCAGAA GAGCAAGGCT CTAATGCGCC TACCCAATTG
    CCAGCAGACT ATGACATGAT GTGTTTTAAT ATTAGTGGCA ATGAGATTTT GAGCCAGAGC
    AGCCTGATTC CGAATATAAA CCTTTATAAT TCGCTGGACA GTTTGCAAGA TTCCGCCACT
    GTTTTCTTTA ACATTGACCC AGGTAAACCC GACATGGTGG ATCCTAACGA AGTACTGAAG
    TATAATAAAT TGGACAAACC TCAGTTGTCT GAAACCGCCT CAGAACCTGC TCAATCTGAT
    ACTCCACTTG AATCCGATGC CCAAGACCTT TACACCGTGA ATCTGAGCGA TATACCCATC
    AGCATTATCA GCTCTTCAGA AGAATTGGAT AGCGACATAA TATCCAACTC GCCAGTGCTT
    TGCATTAATT GCCACAAACT GTTCTCCAGT TGCGCGCTAT TCGAAAATCA CATCTGCTCA
    GAGGAACGAA CTGCTGCAGA ACAGAACAAC TTGGAATTGA TTATTCAGGA TGGAACAACT
    CATACAGTCA AAAGCCAGAT TTTCAGCGAA ACTGGTTCTG TGAACAACGT GCCAGTTATC
    CAATCTCCTG CAGTGGTGAA AAAGATGCCC GAAATAATTT TCGAATGCCC AACGTTCAGC
    ATGCCGACGC CAGATCAAAT CGTGGGCAAT TTGCCCGGCG GTACAATAAA GTCTCAACTT
    CAGCACTATG TCGACGATGT GGAAGAAGCC CCGCAGATAT ACTGCAAACA TTGCAAATCG
    GCCATGCAAT CAGAAGAACA GTATCGTAAA CACTTGTTTC TGCACCCAGA TCTGGCTGAC
    AAGATCTGCA AATACTGTTG CCGCGATTTT AAGAAGCCTT CCGACCTGAA ACGACACCTG
    AGGACGCACA CGGGCGAGAA ACCGTTTGAA TGCGACACTT GCCATAAGAA GTTTTCGCTT
    AAAGCCACGC TACAGGGGCA TATTAGGACC CACAATATTG CAGAAGTCCC GAAAATCACC
    TGCAATGTTT GCAACACGAA CTTCACCACC AAATCCTCCC TCAAACTGCA TATGCTGAAG
    CATACAGGTG CCAAGCCTTA TGCGTGCCAG TACTGCGAGC AGACCTTTCG TACCATAGGA
    ACACGAAAAA CCCATCAGAA AATTCATTTG AATAATCAGA AAGATGCTGA AGATCCTGCG
    AAACTGGCAG GCGTTAAACT GATTAAGTAC ATGGCTGAGC AGATGGAAAG CAATGATTTG
    AGTAAAGGTC CACAAACCGT AGATAAGGAG CCCGTAGTGC TAGTTGACTC TCAACAGCTT
    AATTGGGTCC CGATGGAGTC CACTGAGCTT TTTCAGCAGC TGCAGCCGTA TGGCTTTATT
    ATCAGCTCAG AAGCTGAGTC GAACGTATCA CGAACGGCGG ACGATTTAGC AGCACTTGAT
    GTAAATAGTG AGCTTCAGTT GAGTTCAACA AAATTGCCAG ATATTCAAGT TGAAGACCAA
    AAGACAGAAA AACGCTCCCA GAAGAAACAA GAACGAAAGC AAAGGGTGGA ATGTGACATT
    TGCCATAAAT TGTACTCATC GAAAGACGTT CTACGGAAGC ACAAAAAATG CTTGCACGGA
    CAAAACAAGA AATTTCCCTG TATAAAATGT GATAAAGGCT ACGATCAGCT AGATGATTTG
    CACAAGCATA TATCGAAGTT ACATTCAGGC CATCGGCCTT ACACCTGCGA CTATTGCTTG
    AACAGTTTTG GAGAGGAGGG TAGCTTGAAG ACGCACATTA AGAGGATGCA TCAAAAATGC
    CCCGTGCCAG AAGAGACTGA CAGTGCGATT TTGGAGCTCG AGTACGACTT CTCTTCGCAG
    TATCCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_019766603.1
    CDS484..4572
    Translation

    Target ORF information:

    RefSeq Version XM_019911044.1
    Organism Dendroctonus ponderosae(mountain pine beetle)
    Definition Dendroctonus ponderosae zinc finger protein Xfin-like (LOC109542018), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_019911044.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    ATGGACAGTG TCCTAGCAAT TTCGGAAAAT TGCTTGTCTT CAGACCTTTT ACAAATGGAC 
    CTCTTATTTG AGAGCCTGAA AATGAGCTCA TCGCAAGCGG CTCCGAAATA CACCATCCAG
    CAGCTGGATG AAACCCATTT CGAGCTCATT ACCTGTGAAA CTGATCGAAC TTACAGTTTA
    CACCTAACAG AGCAGCAGGC AGAAATAGTG GATTTCGAGC ATTCAAATAA GGTCCCGGTC
    ATTAGCGTCC AGAAAGACTC AGTCATTCAG TACTCAGCAA GATCAGTTTT AAAGTCTGCC
    AACTCAAACC AGGACGCACC CAAAACTCAC AGACCACCGG TAGATTCTGA CGACGCAGTT
    TATTACGCCT GCTGCGCTAT TCAGTTTGAT GGTTTGCCCG CTTTTCGAGA ACATTTAAAG
    TTGCATGTGG CGGAGGAAAA ATTCGGTTGC CCTCAATGCC ACGCACGCTT TTTGACAGAA
    AACAACATGA AAATTCACAT GGTCACGAAG CACCCGGGCA ATTCCAATGT ATGCCCCATA
    TGCCAGAAAT CGTTCCATCG AAAGGCCAGC TTGAAAGCTC ACGTGCAAAT CCATCAAGAG
    GAGGAAATGT ACCCGTGCGC ACGATGTTGC GAAGAGTTAC CAAGTTACGA TGCACTCTTG
    AAGCATATGG AGCGTCATGC AGTCATAAAG AAACCAATAG ACCCACTAAT GTGCCGCTAT
    TGTAAAATCC AATTGGAAAC GCCTGCACAG TATCAAAAAC ATTTAGCTAC ACACAAGGAC
    AAGAGGAAAA ACGGTCATAA AAACCGAAAG GCTAAAAAGA AACGCACAGG AAACCATCGC
    AAAAAGCTGA TATGCCGGTT TTGTACGAAA GTGTTTCCAA AGTTCTACCT GTTGGAGCGC
    CATGAAAGAG TGCACACAGG CGAAAAGCCG TTTAAGTGTC ACATTTGCCA TAAAGGATTC
    GCGCAAAGCA ACTCGTTGAA GCTACATCTG GACAAACACA AAGGCTTAAA ACCCCATAGT
    TGTCCGCTCT GCCCGGCGAA ATTCACTCAG AAAGGAAATC TTACCGCTCA CATAAATAAA
    ACTCACAACT CTCCGCATGA GAACAACGAA AACTATAGAT GCCCCCAGTG TTCGTGTATG
    TTCAAAAGAA TCTCATCCTT GAACGGCCAT ATCACTAAAG CCCATGTGGA TACTGGGAAT
    GGGACGCCTA AAGAGCAAAC GGACCCGCAA AGCGTCATCG ACAAAGTCGT CAGCGGTTTA
    AAGGAGTTGA ATAATGACCC CAACCGATCT GTGTCCAAGC AGGACAAGGC GAAAATGCCC
    GAAGTCGATT TAGCAGAAAA CCAGGGGGAT AACGGCATTC GCCGTTATGC GATCCGACAT
    GAAAAAATCG GCGATGTTCG ATGGTATTTT TGCAATTATT GCTCCAGCCG ATTTAAGAAA
    CCCTCGGATC TCATCAGGCA CTTTAGAACG CATACTTTGG AGAAGCCCTT TAAGTGCCCA
    AAGTGCGAGC AAACATTTTC CTTAAAAACC ACTTTAACGC ACCACTTCAA AATCCAGCAC
    TCACCACTAG AAGTTGAATG CAGCACGACT GAGAGTTGTC AAGCGCCAGC AGCAGACCAG
    GAAGTAGTCA GAACTGACTA TCTCTGCTTG GTATGTGAAA GGCGTTTTCC AACCATCGAG
    GAAAGTAAAG CGCACGGCTT GGAGCATGAA AACGAGTTTC AAACCAGTGA CAACAGCTTC
    GAGTCCATTT CCGGAAATTT AGCGCTTCCA TCTGCACGCT CGGCGCCCAG TGCCGTGGCT
    AATGAAACCG CCCAGGAAAA CGCGCTGCTT TGCAAAATAT GCGGTTTTAA ATGTTCCGGA
    ATAAACAGCT TGGCAAGCCA CGTGATGCAG CACAATGACG ACAAAAACTC TAATAACGCA
    GCGCGTCCAC AGGAATCCGA GCGAAAAACG CAGGGGAACA TCCACATTAA AATTTCGAAA
    TTCAAATGCT CGACTTGCGG CAAAATATTT AAAAGTTTGG CACTGTTGAC CACTCACTGC
    GCCATTCACA GGCGAGCGAA GCCCACTCAC AAGTGTTCCT GCTGTGGCAA AGCTTTTAAG
    ACCGCTGGTC GCTATCGGGC ACACATGAAA AAGAGTCATC CGCAAAAAGA ATTGTCCTTT
    GTTAAGCAGC CAGATAAGTT AGCCAACGGT GCTCAGAGCA CTGCTGACTC AGCAGCGAGC
    AATGGAACAC TTCTGAGCGT CGTCTCAGAA GAGCAAGGCT CTAATGCGCC TACCCAATTG
    CCAGCAGACT ATGACATGAT GTGTTTTAAT ATTAGTGGCA ATGAGATTTT GAGCCAGAGC
    AGCCTGATTC CGAATATAAA CCTTTATAAT TCGCTGGACA GTTTGCAAGA TTCCGCCACT
    GTTTTCTTTA ACATTGACCC AGGTAAACCC GACATGGTGG ATCCTAACGA AGTACTGAAG
    TATAATAAAT TGGACAAACC TCAGTTGTCT GAAACCGCCT CAGAACCTGC TCAATCTGAT
    ACTCCACTTG AATCCGATGC CCAAGACCTT TACACCGTGA ATCTGAGCGA TATACCCATC
    AGCATTATCA GCTCTTCAGA AGAATTGGAT AGCGACATAA TATCCAACTC GCCAGTGCTT
    TGCATTAATT GCCACAAACT GTTCTCCAGT TGCGCGCTAT TCGAAAATCA CATCTGCTCA
    GAGGAACGAA CTGCTGCAGA ACAGAACAAC TTGGAATTGA TTATTCAGGA TGGAACAACT
    CATACAGTCA AAAGCCAGAT TTTCAGCGAA ACTGGTTCTG TGAACAACGT GCCAGTTATC
    CAATCTCCTG CAGTGGTGAA AAAGATGCCC GAAATAATTT TCGAATGCCC AACGTTCAGC
    ATGCCGACGC CAGATCAAAT CGTGGGCAAT TTGCCCGGCG GTACAATAAA GTCTCAACTT
    CAGCACTATG TCGACGATGT GGAAGAAGCC CCGCAGATAT ACTGCAAACA TTGCAAATCG
    GCCATGCAAT CAGAAGAACA GTATCGTAAA CACTTGTTTC TGCACCCAGA TCTGGCTGAC
    AAGATCTGCA AATACTGTTG CCGCGATTTT AAGAAGCCTT CCGACCTGAA ACGACACCTG
    AGGACGCACA CGGGCGAGAA ACCGTTTGAA TGCGACACTT GCCATAAGAA GTTTTCGCTT
    AAAGCCACGC TACAGGGGCA TATTAGGACC CACAATATTG CAGAAGTCCC GAAAATCACC
    TGCAATGTTT GCAACACGAA CTTCACCACC AAATCCTCCC TCAAACTGCA TATGCTGAAG
    CATACAGGTG CCAAGCCTTA TGCGTGCCAG TACTGCGAGC AGACCTTTCG TACCATAGGA
    ACACGAAAAA CCCATCAGAA AATTCATTTG AATAATCAGA AAGATGCTGA AGATCCTGCG
    AAACTGGCAG GCGTTAAACT GATTAAGTAC ATGGCTGAGC AGATGGAAAG CAATGATTTG
    AGTAAAGGTC CACAAACCGT AGATAAGGAG CCCGTAGTGC TAGTTGACTC TCAACAGCTT
    AATTGGGTCC CGATGGAGTC CACTGAGCTT TTTCAGCAGC TGCAGCCGTA TGGCTTTATT
    ATCAGCTCAG AAGCTGAGTC GAACGTATCA CGAACGGCGG ACGATTTAGC AGCACTTGAT
    GTAAATAGTG AGCTTCAGTT GAGTTCAACA AAATTGCCAG ATATTCAAGT TGAAGACCAA
    AAGACAGAAA AACGCTCCCA GAAGAAACAA GAACGAAAGC AAAGGGTGGA ATGTGACATT
    TGCCATAAAT TGTACTCATC GAAAGACGTT CTACGGAAGC ACAAAAAATG CTTGCACGGA
    CAAAACAAGA AATTTCCCTG TATAAAATGT GATAAAGGCT ACGATCAGCT AGATGATTTG
    CACAAGCATA TATCGAAGTT ACATTCAGGC CATCGGCCTT ACACCTGCGA CTATTGCTTG
    AACAGTTTTG GAGAGGAGGG TAGCTTGAAG ACGCACATTA AGAGGATGCA TCAAAAATGC
    CCCGTGCCAG AAGAGACTGA CAGTGCGATT TTGGAGCTCG AGTACGACTT CTCTTCGCAG
    TATCCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.