cyb5d1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	cyb5d1
Entrez Gene ID	795592
Full Name	cytochrome b5 domain containing 1
Synonyms	zgc:112008
General protein information	Preferred Names cytochrome b5 domain containing 1 Names cytochrome b5 domain-containing protein 1 cytochrome b5 domain containing 1 like
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001017684.2	NP_001017684.1	cytochrome b5 domain-containing protein 1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	LOC455210	XP_511953.2
Rattus norvegicus (Norway rat)	Cyb5d1	NP_001178819.1
	CYB5D1	XP_001110765.1
Danio rerio (zebrafish)	cyb5d1	NP_001017684.1
Drosophila melanogaster (fruit fly)	CG15429	NP_608823.2
Xenopus tropicalis (tropical clawed frog)	cyb5d1	NP_001072620.1
Canis lupus familiaris (dog)	CYB5D1	XP_849932.3
Mus musculus (house mouse)	Cyb5d1	NP_001038990.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP010016	XP_553911.2
Homo sapiens (human)	CYB5D1	NP_653208.2
Bos taurus (cattle)	CYB5D1	NP_001179067.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Developmental Toxicity of Zinc Oxide Nanoparticles to Zebrafish (Danio rerio): A Transcriptomic Analysis.
Choi JS, Kim RO, Yoon S, Kim WK
PloS one11(8)e0160763(2016)

Evolutionary evidence of tumor necrosis factor super family members in the Japanese pufferfish (Takifugu rubripes): Comprehensive genomic identification and expression analysis.
Biswas G, Kinoshita S, Kono T, Hikima J, Sakai M
Marine genomics2225-36(2015 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cyb5d1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cyb5d1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa39115	NM_001017684.2 Latest version!	Danio rerio cytochrome b5 domain containing 1 (cyb5d1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cyb5d1 ( NM_001017684.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001017684.1 Danio rerio cytochrome b5 domain containing 1 (cyb5d1), mRNA.

Price & Availability↑

CloneID	ODa39115
Clone ID Related Accession (Same CDS sequence)	NM_001017684.2
Accession Version	NM_001017684.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-06-22
Organism	Danio rerio(zebrafish)
Product	cytochrome b5 domain-containing protein 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093157.1. On Aug 30, 2012 this sequence version replaced NM_001017684.1. ##Evidence-Data-START## Transcript exon combination :: BC093157.1, EE325622.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGCGGCGTT CAAAGTATTT CACACCGAAC GAGGTGTCGC TTCACAACAC AATCAATGAC 
ATATGGGTGT CGTACCTGGG CAAAGTGTAC GATCTCACAC CACTGCTGGA GGCATACAAA 
GGTGATGTTT TATTGAAGCC TATTATAGAG TGCGCAGGAA AGGACATCAG TCACTGGTTC 
GACCCAAAGA CAAAGGACAT TCTTACACAT GTTGACCCGT TGACTGGCTG CATTAAATAC 
TACACCCCTA GGGGGCGCTT CATACACATA CCCCCTCCTT GCCCTCGCAC CGACTGGGCC 
AATAACTTCG GGAAGCCGTG GTGGAAGGAT AATCGCTATG AGGTTGGGCT GCTGTCTGCC 
AAAACACGCT GGATCCGCAT TATTAACACT CTAACCTCCC AGGAGCAGAA GCTGGAGGTT 
TGCTCCGAGG AATCTTTAGA TGAGATTCTC CACCGATACC TGTTCTACAA TTCCCATGCC 
GCAAGCTACA CCTGGAAACT CAGTGGTATA AATCTAGACA TGAGTAAGAC CCTTAGTGAA 
AATGGCATCC CCGAGGAGGA CGAGTTTTAC TGCGGAAGCC CAGACTGTAA CCTCTTCTCT 
CCATCTATTT GTCTGTACTT TAACGACGAC CTCACTGAAC TCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001017684.1
CDS	89..733
Translation	MRRSKYFTPNEVSLHNTINDIWVSYLGKVYDLTPLLEAYKGDVLLKPIIECAGKDISHWFDPKTKDILTHVDPLTGCIKYYTPRGRFIHIPPPCPRTDWANNFGKPWWKDNRYEVGLLSAKTRWIRIINTLTSQEQKLEVCSEESLDEILHRYLFYNSHAASYTWKLSGINLDMSKTLSENGIPEEDEFYCGSPDCNLFSPSICLYFNDDLTEL

Target ORF information:

RefSeq Version	NM_001017684.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio cytochrome b5 domain containing 1 (cyb5d1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001017684.2

ORF Insert Sequence:

ATGCGGCGTT CAAAGTATTT CACACCGAAC GAGGTGTCGC TTCACAACAC AATCAATGAC 
ATATGGGTGT CGTACCTGGG CAAAGTGTAC GATCTCACAC CACTGCTGGA GGCATACAAA 
GGTGATGTTT TATTGAAGCC TATTATAGAG TGCGCAGGAA AGGACATCAG TCACTGGTTC 
GACCCAAAGA CAAAGGACAT TCTTACACAT GTTGACCCGT TGACTGGCTG CATTAAATAC 
TACACCCCTA GGGGGCGCTT CATACACATA CCCCCTCCTT GCCCTCGCAC CGACTGGGCC 
AATAACTTCG GGAAGCCGTG GTGGAAGGAT AATCGCTATG AGGTTGGGCT GCTGTCTGCC 
AAAACACGCT GGATCCGCAT TATTAACACT CTAACCTCCC AGGAGCAGAA GCTGGAGGTT 
TGCTCCGAGG AATCTTTAGA TGAGATTCTC CACCGATACC TGTTCTACAA TTCCCATGCC 
GCAAGCTACA CCTGGAAACT CAGTGGTATA AATCTAGACA TGAGTAAGAC CCTTAGTGAA 
AATGGCATCC CCGAGGAGGA CGAGTTTTAC TGCGGAAGCC CAGACTGTAA CCTCTTCTCT 
CCATCTATTT GTCTGTACTT TAACGACGAC CTCACTGAAC TCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Developmental Toxicity of Zinc Oxide Nanoparticles to Zebrafish (Danio rerio): A Transcriptomic Analysis.
PloS one11(8)e0160763(2016)
Choi JS,Kim RO,Yoon S,Kim WK

Evolutionary evidence of tumor necrosis factor super family members in the Japanese pufferfish (Takifugu rubripes): Comprehensive genomic identification and expression analysis.
Marine genomics2225-36(2015 Aug)
Biswas G,Kinoshita S,Kono T,Hikima J,Sakai M