vps39 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	vps39
Entrez Gene ID	567078
Full Name	vacuolar protein sorting 39 homolog (S. cerevisiae)
Synonyms	lbk,vam6
General protein information	Preferred Names vacuolar protein sorting 39 homolog (S. cerevisiae) Names vam6/Vps39-like protein vesicle fusion protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017351662.1	XP_017207151.1	vam6/Vps39-like protein isoform X1
XM_005158918.4	XP_005158975.1	vam6/Vps39-like protein isoform X1
XM_005158918.3	XP_005158975.1	vam6/Vps39-like protein isoform X2
NM_001113540.2	NP_001107012.2	vam6/Vps39-like protein

Pathways from BioSystems

Homologies

Caenorhabditis elegans (roundworm)	vps-39	NP_001041163.1
Pan troglodytes (chimpanzee)	VPS39	XP_510331.3
Bos taurus (cattle)	VPS39	NP_001193173.1
Homo sapiens (human)	VPS39	NP_056104.2
Canis lupus familiaris (dog)	VPS39	XP_544640.2
Drosophila melanogaster (fruit fly)	CG7146	NP_650702.1
Schizosaccharomyces pombe (fission yeast)	vam6	NP_593392.1
Danio rerio (zebrafish)	vps39	NP_001107012.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP002498	XP_312442.5
Magnaporthe oryzae (rice blast fungus)	MGG_01054	XP_003717885.1
Neurospora crassa	NCU01539	XP_956242.2
Oryza sativa (rice)	Os03g0715500	NP_001051077.1
	VPS39	XP_001102792.1
Mus musculus (house mouse)	Vps39	NP_671495.1
Rattus norvegicus (Norway rat)	Vps39	NP_001012186.2
Gallus gallus (chicken)	VPS39	NP_001026365.1
Arabidopsis thaliana (thale cress)	EMB2754	NP_195381.6

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

The zebrafish mutant lbk/vam6 resembles human multisystemic disorders caused by aberrant trafficking of endosomal vesicles.
Schonthaler HB, Fleisch VC, Biehlmaier O, Makhankov Y, Rinner O, Bahadori R, Geisler R, Schwarz H, Neuhauss SC, Dahm R
Development (Cambridge, England)135(2)387-99(2008 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The present study provides the first phenotypic description of a lack of vam6 gene function in a multicellular organism.
Title: The zebrafish mutant lbk/vam6 resembles human multisystemic disorders caused by aberrant trafficking of endosomal vesicles.

The following vps39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the vps39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa35203	NM_001113540.2 Latest version!	Danio rerio VPS39 subunit of HOPS complex (vps39), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00
ODa22905	XM_005158918.4 Latest version!	Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00
ODa55604	XM_017351662.1 Latest version!	Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00
View Old Accession Versions >>
ODa22905	XM_005158918.3	Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

vps39 ( NM_001113540.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001107012.2 Danio rerio VPS39 subunit of HOPS complex (vps39), mRNA.

Price & Availability↑

CloneID	ODa35203
Clone ID Related Accession (Same CDS sequence)	NM_001113540.2
Accession Version	NM_001113540.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2628bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-07
Organism	Danio rerio(zebrafish)
Product	vam6/Vps39-like protein
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EF446162.1, CU928140.8 and CU655820.18. On Aug 14, 2010 this sequence version replaced NM_001113540.1. ##Evidence-Data-START## Transcript exon combination :: EF446162.1, GDQH01006880.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGCATGACG CGTACGAACC AGTTCCCATC CTGGAGAAAC TGCCCCTCCA GATCGACTGT 
CTGGCGGCCT GGGATGATTG GCTCCTTGTG GGGACCAAAC CGGGTCACCT GCTTCAGTAC 
AGGATCAAGA AAGATGCCGG TACAAACAGG TTTGAAGTTA CATTAGAGAA ATCCAATAAG 
AACTTCTCCA AGAAGATTCA GCAGCTATTT GTAGTTTCAC AGTACAAGAT TTTGGTTAGT 
TTGTTGGAAA ACAACATCCA CGTTCACGAC CTGCTCACGT TCCAGCAGAT AACTGTGGTA 
TCAAAAGCTA AAGGGGCTAC ATTATTTGCC TGTGACCTGC AGCAGTCTGA ATCTGGTGAG 
GCTAAACTGC GCATGTGTGT TGCAGTCAAG AGGAAAATTC AGCTCTATTA CTGGAAGGAC 
AGAGAATTCC ACGAATTACA GGGAGATGTC ACTGCTCCGG ACATTCCCAA GTCCATGGCG 
TGGTGTGAGA ACTCTATATG CGTGGGTTTC AAACGAGACT ACTATCTGAT ACGGATGGAT 
GGACGTGGCT CAATCAAGGA ACTGTTCCCC ACAGGAAAAC AGCTGGAGCC ATTGGTGGCC 
CCACTGGCTG ATGGGAAGGC AGCAGTGGGT CAGGATGACC TCACGGTTGT CTTAAATGAA 
GAAGGCGTCT GCACTCAGAA ATGTGCCCTC AACTGGACTG ACATCCCTGT TGCAATGGAG 
CACCAGCCAC CATACATCAT TGCAGTGTTA CCGCGGTATG TGGAGATCCG CACAGTCGAG 
CCCAGACTCC TGGTGCAGAG CGTAGAGCTG CAGAGACCAC GCTTCATCAC CTCCGCTGGG 
TCAAACGTTG TGTATGTCGC TAGCAATCAT TTTGTCTGGC GTTTGGTCCC GGTGTCTATA 
GCCAGCCAGA TACGGCAGCT GCTACAGGAC AAACAGTTTG AACTGGCACT TCAGCTAGCG 
AAAATGAAGG ATGATTTCGA TACAGACAAG AGGCAACAGA TCCATCACAT TCAGAACCTG 
TTTGCCTTCA ACCTGTTCTG CCAGAAGCGC TTTGATGACT CCATGCAGGG CTTTGCTAAG 
TTAGGGACAG ATCCCACTCA TGTTATTGGA CTGTACCCAG ACCTGCTCCC CTCCGACTAT 
CGTAAACAGT TGCACTACCC AAACCCTCTG CCCCCGCTGT CTGGAGCTGA ACTGGAGAAA 
GCCCACCTCG CCCTCATAGA CTACCTGACA CAGAAACGCA GTCATTTAGT GAAGCAGCTG 
AACGACTCTG ACCCGTCGAC CACCTCACCG CTAATGGAGG GAACGCCCAC CATCAAGAGC 
CGCAAGAAAC TCCTGCAGAT CATCGACACC ACCCTGCTCA AGTGTTACCT CCATACCAAT 
GTAGCCTTAG TGTCTCCTCT CCTGCGCCTG GAGAACAACC ACTGTCACAT CGAGGAGAGC 
GAGTATGTGC TGAAGAAAGC CCACAAATAC AGCGAACTCA TCATTCTCTA TGAGAAAAAA 
GGCCTTCATC AGAAAGCTCT GCAGGTTCTG CTGGATCAGT CCACCAAAGC CAACTCGCCT 
CTGAAGGGTC ACGAGAGGAC AGTGCAGTAC CTCCAGAGGC TCGGATTGGA GAACCTGGGA 
ATCATCTTTG AGTTTTCGCC GTGGGTGTTG AAGATTTGTC CAGAGGACGG CCTGAAGATT 
TTCACGGAGG ACCTAACGGA GGTGGAGACA CTGCCCAGGG ATCAAGTGTT GAACTTTCTG 
AAGGAGGGCT TCAAGGAGCT GGCCATCCCA TACCTGGAGC ACATCATTCA CATGTGGGAC 
GAGACGCGGC CTGAGTTTCA CAACGTTCTG ATCCAGCTCT ACCTGGAGAA GGTGCAAGGG 
CTCATGAAGG CGTATCTCAA CACACTGCCT GAAGGCATTC CAGCTGTAGC TGCAGGAAAA 
GAGAAAGGAG AGCTGGGCGA GTTCAGGAAC AAACTTCTGT CTTTCCTGGA AGTTTCCAGC 
AGTTACGAGC CAGAGATACT CATCAGTGAT TTCCCTTTCG ACGGCCTGTT GGAGGAAAGA 
GCGCTTCTTT TGGGACGTAT GGGGAAACAC GAGCAGGCTC TGTTCATCTA TGTCCACATC 
CTGAAGGACA CGCGGATGGC TGAAGAGTAC TGCCACGGTC ATTATGATCC TGCAACTAAT 
GGCAATAAAG ATGTGTATCT GTCACTGCTG CGCATGTATC TGTCTCCTCC TGATGTTCAT 
TTCCTCGGGC CCATTAAGAT GGAGCTATGC GAGCCACAGG CAAACCTCCA GGCGGCGCTG 
AACGTCCTTC AGCTTCACCA CAGCAAACTC AACACCACCA AAGCCATAAA CCTGCTGCCA 
GCCAACACAC AGATCCGAGA GATCCAGGTG TTTCTGGAGA GCGTGCTGGA GGAGAAGGCT 
GGACGCAAGC GCTTCGACCA GGTCCTGAAG AGCCTTCTAC AGGCCGAGTT CCTGCGGGTG 
CAGGAGGAGC GTATCTTTCA CCAGCAGGTG AAGTGTGTGA TCACAGACGA GAAGACCTGC 
AGAGTGTGCA AGAAGAAGAT TGGAAACAGT GCCTTTGCCA GGTATCCAAA CGGTGTGGTG 
GTCCACTACT TCTGCTGTAA AGATCGCAAC ACATGTCCAG CAGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001107012.2
CDS	1..2628
Translation	MHDAYEPVPILEKLPLQIDCLAAWDDWLLVGTKPGHLLQYRIKKDAGTNRFEVTLEKSNKNFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQSESGEAKLRMCVAVKRKIQLYYWKDREFHELQGDVTAPDIPKSMAWCENSICVGFKRDYYLIRMDGRGSIKELFPTGKQLEPLVAPLADGKAAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTVEPRLLVQSVELQRPRFITSAGSNVVYVASNHFVWRLVPVSIASQIRQLLQDKQFELALQLAKMKDDFDTDKRQQIHHIQNLFAFNLFCQKRFDDSMQGFAKLGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPPLSGAELEKAHLALIDYLTQKRSHLVKQLNDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEESEYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGLENLGIIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDQVLNFLKEGFKELAIPYLEHIIHMWDETRPEFHNVLIQLYLEKVQGLMKAYLNTLPEGIPAVAAGKEKGELGEFRNKLLSFLEVSSSYEPEILISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHGHYDPATNGNKDVYLSLLRMYLSPPDVHFLGPIKMELCEPQANLQAALNVLQLHHSKLNTTKAINLLPANTQIREIQVFLESVLEEKAGRKRFDQVLKSLLQAEFLRVQEERIFHQQVKCVITDEKTCRVCKKKIGNSAFARYPNGVVVHYFCCKDRNTCPAE

Target ORF information:

RefSeq Version	NM_001113540.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio VPS39 subunit of HOPS complex (vps39), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001113540.2

ORF Insert Sequence:

ATGCATGACG CGTACGAACC AGTTCCCATC CTGGAGAAAC TGCCCCTCCA GATCGACTGT 
CTGGCGGCCT GGGATGATTG GCTCCTTGTG GGGACCAAAC CGGGTCACCT GCTTCAGTAC 
AGGATCAAGA AAGATGCCGG TACAAACAGG TTTGAAGTTA CATTAGAGAA ATCCAATAAG 
AACTTCTCCA AGAAGATTCA GCAGCTATTT GTAGTTTCAC AGTACAAGAT TTTGGTTAGT 
TTGTTGGAAA ACAACATCCA CGTTCACGAC CTGCTCACGT TCCAGCAGAT AACTGTGGTA 
TCAAAAGCTA AAGGGGCTAC ATTATTTGCC TGTGACCTGC AGCAGTCTGA ATCTGGTGAG 
GCTAAACTGC GCATGTGTGT TGCAGTCAAG AGGAAAATTC AGCTCTATTA CTGGAAGGAC 
AGAGAATTCC ACGAATTACA GGGAGATGTC ACTGCTCCGG ACATTCCCAA GTCCATGGCG 
TGGTGTGAGA ACTCTATATG CGTGGGTTTC AAACGAGACT ACTATCTGAT ACGGATGGAT 
GGACGTGGCT CAATCAAGGA ACTGTTCCCC ACAGGAAAAC AGCTGGAGCC ATTGGTGGCC 
CCACTGGCTG ATGGGAAGGC AGCAGTGGGT CAGGATGACC TCACGGTTGT CTTAAATGAA 
GAAGGCGTCT GCACTCAGAA ATGTGCCCTC AACTGGACTG ACATCCCTGT TGCAATGGAG 
CACCAGCCAC CATACATCAT TGCAGTGTTA CCGCGGTATG TGGAGATCCG CACAGTCGAG 
CCCAGACTCC TGGTGCAGAG CGTAGAGCTG CAGAGACCAC GCTTCATCAC CTCCGCTGGG 
TCAAACGTTG TGTATGTCGC TAGCAATCAT TTTGTCTGGC GTTTGGTCCC GGTGTCTATA 
GCCAGCCAGA TACGGCAGCT GCTACAGGAC AAACAGTTTG AACTGGCACT TCAGCTAGCG 
AAAATGAAGG ATGATTTCGA TACAGACAAG AGGCAACAGA TCCATCACAT TCAGAACCTG 
TTTGCCTTCA ACCTGTTCTG CCAGAAGCGC TTTGATGACT CCATGCAGGG CTTTGCTAAG 
TTAGGGACAG ATCCCACTCA TGTTATTGGA CTGTACCCAG ACCTGCTCCC CTCCGACTAT 
CGTAAACAGT TGCACTACCC AAACCCTCTG CCCCCGCTGT CTGGAGCTGA ACTGGAGAAA 
GCCCACCTCG CCCTCATAGA CTACCTGACA CAGAAACGCA GTCATTTAGT GAAGCAGCTG 
AACGACTCTG ACCCGTCGAC CACCTCACCG CTAATGGAGG GAACGCCCAC CATCAAGAGC 
CGCAAGAAAC TCCTGCAGAT CATCGACACC ACCCTGCTCA AGTGTTACCT CCATACCAAT 
GTAGCCTTAG TGTCTCCTCT CCTGCGCCTG GAGAACAACC ACTGTCACAT CGAGGAGAGC 
GAGTATGTGC TGAAGAAAGC CCACAAATAC AGCGAACTCA TCATTCTCTA TGAGAAAAAA 
GGCCTTCATC AGAAAGCTCT GCAGGTTCTG CTGGATCAGT CCACCAAAGC CAACTCGCCT 
CTGAAGGGTC ACGAGAGGAC AGTGCAGTAC CTCCAGAGGC TCGGATTGGA GAACCTGGGA 
ATCATCTTTG AGTTTTCGCC GTGGGTGTTG AAGATTTGTC CAGAGGACGG CCTGAAGATT 
TTCACGGAGG ACCTAACGGA GGTGGAGACA CTGCCCAGGG ATCAAGTGTT GAACTTTCTG 
AAGGAGGGCT TCAAGGAGCT GGCCATCCCA TACCTGGAGC ACATCATTCA CATGTGGGAC 
GAGACGCGGC CTGAGTTTCA CAACGTTCTG ATCCAGCTCT ACCTGGAGAA GGTGCAAGGG 
CTCATGAAGG CGTATCTCAA CACACTGCCT GAAGGCATTC CAGCTGTAGC TGCAGGAAAA 
GAGAAAGGAG AGCTGGGCGA GTTCAGGAAC AAACTTCTGT CTTTCCTGGA AGTTTCCAGC 
AGTTACGAGC CAGAGATACT CATCAGTGAT TTCCCTTTCG ACGGCCTGTT GGAGGAAAGA 
GCGCTTCTTT TGGGACGTAT GGGGAAACAC GAGCAGGCTC TGTTCATCTA TGTCCACATC 
CTGAAGGACA CGCGGATGGC TGAAGAGTAC TGCCACGGTC ATTATGATCC TGCAACTAAT 
GGCAATAAAG ATGTGTATCT GTCACTGCTG CGCATGTATC TGTCTCCTCC TGATGTTCAT 
TTCCTCGGGC CCATTAAGAT GGAGCTATGC GAGCCACAGG CAAACCTCCA GGCGGCGCTG 
AACGTCCTTC AGCTTCACCA CAGCAAACTC AACACCACCA AAGCCATAAA CCTGCTGCCA 
GCCAACACAC AGATCCGAGA GATCCAGGTG TTTCTGGAGA GCGTGCTGGA GGAGAAGGCT 
GGACGCAAGC GCTTCGACCA GGTCCTGAAG AGCCTTCTAC AGGCCGAGTT CCTGCGGGTG 
CAGGAGGAGC GTATCTTTCA CCAGCAGGTG AAGTGTGTGA TCACAGACGA GAAGACCTGC 
AGAGTGTGCA AGAAGAAGAT TGGAAACAGT GCCTTTGCCA GGTATCCAAA CGGTGTGGTG 
GTCCACTACT TCTGCTGTAA AGATCGCAAC ACATGTCCAG CAGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

vps39 ( XM_005158918.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005158975.1 Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa22905
Clone ID Related Accession (Same CDS sequence)	XM_005158918.4 , XM_005158918.3
Accession Version	XM_005158918.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2625bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	vam6/Vps39-like protein isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005158918.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCACGACG CATACGAACC AGTTCCCATC CTGGAGAAAC TGCCCCTCCA GATCGACTGT 
CTGGCGGCCT GGGATGATTG GCTCCTTGTG GGGACCAAAC CGGGTCATCT GCTTCAGTAC 
AGGATCAAGA AAGATGCCGG TACAAACAGG TTTGAAGTTA CATTAGAGAA ATCCAATAAG 
AACTTCTCCA AGAAGATTCA GCAGCTATTT GTAGTTTCAC AGTACAAGAT TTTGGTTAGT 
TTGTTGGAAA ACAACATCCA CGTTCACGAC CTGCTCACGT TCCAGCAGAT AACTGTGGTA 
TCAAAAGCTA AAGGGGCTAC ATTATTTGCC TGTGACCTGC AGTCTGAATC TGGTGAGGCT 
AAACTGCGCA TGTGTGTTGC AGTCAAGAGG AAAATTCAGC TCTATTACTG GAAGGACAGA 
GAATTCCACG AATTACAGGG AGATGTCACT GCTCCGGACA TTCCCAAGTC CATGGCGTGG 
TGTGAGAACT CTATATGCGT GGGTTTCAAA CGAGACTACT ATCTGATACG GATGGATGGA 
CGTGGCTCAA TCAAGGAACT GTTCCCCACA GGAAAACAGC TGGAGCCATT GGTGGCCCCA 
CTGGCTGATG GGAAGGTAGC AGTGGGTCAG GATGACCTCA CGGTTGTCTT AAATGAAGAA 
GGCGTCTGCA CTCAGAAATG TGCCCTCAAC TGGACTGACA TCCCTGTTGC AATGGAGCAC 
CAGCCACCAT ACATCATTGC AGTGTTACCG CGGTATGTGG AGATCCGCAC AGTCGAGCCC 
AGACTCCTGG TGCAGAGCGT AGAGCTGCAG AGACCACGCT TCATCACCTC CGCTGGGTCA 
AACGTTGTGT ATGTCGCTAG CAATCATTTT GTCTGGCGTT TGGTCCCGGT GTCTATAGCC 
AGCCAGATAC GGCAGCTGCT ACAGGACAAA CAGTTTGAAC TGGCACTTCA GCTAGCGAAA 
ATGAAGGATG ATTCCGATAC AGACAAGAGG CAACAGATCC ATCACATTCA GAACCTGTTT 
GCCTTCAACC TGTTCTGCCA GAAGCGCTTT GATGACTCCA TGCAGGGCTT TGCTAAGTTA 
GGGACAGATC CCACTCATGT TATTGGACTG TACCCAGACC TGCTCCCCTC CGACTATCGT 
AAACAGTTGC ACTACCCAAA CCCTCTGCCC CCGCTGTCTG GAGCTGAACT GGAGAAAGCC 
CACCTCGCCC TCATAGACTA CCTGACACAG AAACGCAGTC ATTTAGTGAA GCAGCTGAAC 
GACTCTGACC CGTCGACCAC CTCACCGCTA ATGGAGGGAA CGCCCACCAT CAAGAGCCGC 
AAGAAACTCC TGCAGATCAT CGACACCACC CTGCTCAAGT GTTACCTCCA TACCAATGTA 
GCCTTAGTGT CTCCTCTCCT GCGCCTGGAG AACAACCACT GTCACATCGA GGAGAGCGAG 
TATGTGCTGA AGAAAGCCCA CAAATACAGC GAACTCATCA TTCTCTATGA GAAAAAAGGC 
CTTCATCAGA AAGCTCTGCA GGTTCTGCTG GATCAGTCCA CCAAAGCCAA CTCGCCTCTG 
AAGGGTCACG AGAGGACAGT GCAGTACCTC CAGAGGCTCG GATTGGAGAA CCTGGGAATC 
ATCTTTGAGT TTTCGCCGTG GGTGTTGAAG ATTTGTCCAG AGGACGGCCT GAAGATTTTC 
ACGGAGGACC TAACGGAGGT GGAGACACTG CCCAGGGATC AAGTGTTGAA CTTTCTGAAG 
GAGGGCTTCA AGGAGCTGGC CATCCCATAC CTGGAGCACA TCATTCACAT GTGGGACGAG 
ACGCGGCCTG AGTTTCACAA CGTTCTGATC CAGCTCTACC TGGAGAAGGT GCAAGGGCTC 
ATGAAGGCGT ATCTCAACAC ACTGCCTGAA GGCATTCCAG CTGTAGCTGC AGGAAAAGAG 
AAAGGAGAGC TGGGCGAGTT CAGGAACAAA CTTCTGTCTT TCCTGGAAGT TTCCAGCAGT 
TACGAGCCAG AGATACTCAT CAGTGATTTC CCTTTCGACG GCCTGTTGGA GGAAAGAGCG 
CTTCTTTTGG GACGTATGGG GAAACACGAG CAGGCTCTGT TCATCTATGT CCACATCCTG 
AAGGACACGC GGATGGCTGA AGAGTACTGC CACGGTCATT ATGATCCTGC AACTAATGGC 
AATAAAGATG TGTATCTGTC ACTGCTGCGC ATGTATCTGT CTCCTCCTGA TGTTCATTTC 
CTCGGGCCCA TTAAGATGGA GCTATGCGAG CCACAGGCAA ACCTCCAGGC GGCGCTGAAC 
GTCCTTCAGC TTCACCACAG CAAACTCAAC ACCACCAAAG CCATAAACCT GCTGCCAGCC 
AACACACAGA TCCGAGAGAT CCAGGTGTTT CTGGAGAGCG TGCTGGAGGA GAAGGCTGGA 
CGCAAGCGCT TCGACCAGGT CCTGAAGAGC CTTCTACAGG CCGAGTTCCT GCGGGTGCAG 
GAGGAGCGTA TCTTTCACCA GCAGGTGAAG TGTGTGATCA CAGACGAGAA GACCTGCAGA 
GTGTGCAAGA AGAAGATTGG AAACAGTGCC TTTGCCAGGT ATCCAAACGG TGTGGTGGTC 
CACTACTTCT GCTGTAAAGA TCGCAACACA TGTCCAGCAG AGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005158975.1
CDS	537..3161
Translation	MHDAYEPVPILEKLPLQIDCLAAWDDWLLVGTKPGHLLQYRIKKDAGTNRFEVTLEKSNKNFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQSESGEAKLRMCVAVKRKIQLYYWKDREFHELQGDVTAPDIPKSMAWCENSICVGFKRDYYLIRMDGRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTVEPRLLVQSVELQRPRFITSAGSNVVYVASNHFVWRLVPVSIASQIRQLLQDKQFELALQLAKMKDDSDTDKRQQIHHIQNLFAFNLFCQKRFDDSMQGFAKLGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPPLSGAELEKAHLALIDYLTQKRSHLVKQLNDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEESEYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGLENLGIIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDQVLNFLKEGFKELAIPYLEHIIHMWDETRPEFHNVLIQLYLEKVQGLMKAYLNTLPEGIPAVAAGKEKGELGEFRNKLLSFLEVSSSYEPEILISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHGHYDPATNGNKDVYLSLLRMYLSPPDVHFLGPIKMELCEPQANLQAALNVLQLHHSKLNTTKAINLLPANTQIREIQVFLESVLEEKAGRKRFDQVLKSLLQAEFLRVQEERIFHQQVKCVITDEKTCRVCKKKIGNSAFARYPNGVVVHYFCCKDRNTCPAE

Target ORF information:

RefSeq Version	XM_005158918.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005158918.4

ORF Insert Sequence:

ATGCACGACG CATACGAACC AGTTCCCATC CTGGAGAAAC TGCCCCTCCA GATCGACTGT 
CTGGCGGCCT GGGATGATTG GCTCCTTGTG GGGACCAAAC CGGGTCATCT GCTTCAGTAC 
AGGATCAAGA AAGATGCCGG TACAAACAGG TTTGAAGTTA CATTAGAGAA ATCCAATAAG 
AACTTCTCCA AGAAGATTCA GCAGCTATTT GTAGTTTCAC AGTACAAGAT TTTGGTTAGT 
TTGTTGGAAA ACAACATCCA CGTTCACGAC CTGCTCACGT TCCAGCAGAT AACTGTGGTA 
TCAAAAGCTA AAGGGGCTAC ATTATTTGCC TGTGACCTGC AGTCTGAATC TGGTGAGGCT 
AAACTGCGCA TGTGTGTTGC AGTCAAGAGG AAAATTCAGC TCTATTACTG GAAGGACAGA 
GAATTCCACG AATTACAGGG AGATGTCACT GCTCCGGACA TTCCCAAGTC CATGGCGTGG 
TGTGAGAACT CTATATGCGT GGGTTTCAAA CGAGACTACT ATCTGATACG GATGGATGGA 
CGTGGCTCAA TCAAGGAACT GTTCCCCACA GGAAAACAGC TGGAGCCATT GGTGGCCCCA 
CTGGCTGATG GGAAGGTAGC AGTGGGTCAG GATGACCTCA CGGTTGTCTT AAATGAAGAA 
GGCGTCTGCA CTCAGAAATG TGCCCTCAAC TGGACTGACA TCCCTGTTGC AATGGAGCAC 
CAGCCACCAT ACATCATTGC AGTGTTACCG CGGTATGTGG AGATCCGCAC AGTCGAGCCC 
AGACTCCTGG TGCAGAGCGT AGAGCTGCAG AGACCACGCT TCATCACCTC CGCTGGGTCA 
AACGTTGTGT ATGTCGCTAG CAATCATTTT GTCTGGCGTT TGGTCCCGGT GTCTATAGCC 
AGCCAGATAC GGCAGCTGCT ACAGGACAAA CAGTTTGAAC TGGCACTTCA GCTAGCGAAA 
ATGAAGGATG ATTCCGATAC AGACAAGAGG CAACAGATCC ATCACATTCA GAACCTGTTT 
GCCTTCAACC TGTTCTGCCA GAAGCGCTTT GATGACTCCA TGCAGGGCTT TGCTAAGTTA 
GGGACAGATC CCACTCATGT TATTGGACTG TACCCAGACC TGCTCCCCTC CGACTATCGT 
AAACAGTTGC ACTACCCAAA CCCTCTGCCC CCGCTGTCTG GAGCTGAACT GGAGAAAGCC 
CACCTCGCCC TCATAGACTA CCTGACACAG AAACGCAGTC ATTTAGTGAA GCAGCTGAAC 
GACTCTGACC CGTCGACCAC CTCACCGCTA ATGGAGGGAA CGCCCACCAT CAAGAGCCGC 
AAGAAACTCC TGCAGATCAT CGACACCACC CTGCTCAAGT GTTACCTCCA TACCAATGTA 
GCCTTAGTGT CTCCTCTCCT GCGCCTGGAG AACAACCACT GTCACATCGA GGAGAGCGAG 
TATGTGCTGA AGAAAGCCCA CAAATACAGC GAACTCATCA TTCTCTATGA GAAAAAAGGC 
CTTCATCAGA AAGCTCTGCA GGTTCTGCTG GATCAGTCCA CCAAAGCCAA CTCGCCTCTG 
AAGGGTCACG AGAGGACAGT GCAGTACCTC CAGAGGCTCG GATTGGAGAA CCTGGGAATC 
ATCTTTGAGT TTTCGCCGTG GGTGTTGAAG ATTTGTCCAG AGGACGGCCT GAAGATTTTC 
ACGGAGGACC TAACGGAGGT GGAGACACTG CCCAGGGATC AAGTGTTGAA CTTTCTGAAG 
GAGGGCTTCA AGGAGCTGGC CATCCCATAC CTGGAGCACA TCATTCACAT GTGGGACGAG 
ACGCGGCCTG AGTTTCACAA CGTTCTGATC CAGCTCTACC TGGAGAAGGT GCAAGGGCTC 
ATGAAGGCGT ATCTCAACAC ACTGCCTGAA GGCATTCCAG CTGTAGCTGC AGGAAAAGAG 
AAAGGAGAGC TGGGCGAGTT CAGGAACAAA CTTCTGTCTT TCCTGGAAGT TTCCAGCAGT 
TACGAGCCAG AGATACTCAT CAGTGATTTC CCTTTCGACG GCCTGTTGGA GGAAAGAGCG 
CTTCTTTTGG GACGTATGGG GAAACACGAG CAGGCTCTGT TCATCTATGT CCACATCCTG 
AAGGACACGC GGATGGCTGA AGAGTACTGC CACGGTCATT ATGATCCTGC AACTAATGGC 
AATAAAGATG TGTATCTGTC ACTGCTGCGC ATGTATCTGT CTCCTCCTGA TGTTCATTTC 
CTCGGGCCCA TTAAGATGGA GCTATGCGAG CCACAGGCAA ACCTCCAGGC GGCGCTGAAC 
GTCCTTCAGC TTCACCACAG CAAACTCAAC ACCACCAAAG CCATAAACCT GCTGCCAGCC 
AACACACAGA TCCGAGAGAT CCAGGTGTTT CTGGAGAGCG TGCTGGAGGA GAAGGCTGGA 
CGCAAGCGCT TCGACCAGGT CCTGAAGAGC CTTCTACAGG CCGAGTTCCT GCGGGTGCAG 
GAGGAGCGTA TCTTTCACCA GCAGGTGAAG TGTGTGATCA CAGACGAGAA GACCTGCAGA 
GTGTGCAAGA AGAAGATTGG AAACAGTGCC TTTGCCAGGT ATCCAAACGG TGTGGTGGTC 
CACTACTTCT GCTGTAAAGA TCGCAACACA TGTCCAGCAG AGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

vps39 ( XM_005158918.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005158975.1 Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X2, mRNA.

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CloneID	ODa22905
Clone ID Related Accession (Same CDS sequence)	XM_005158918.4 , XM_005158918.3
Accession Version	XM_005158918.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2625bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	vam6/Vps39-like protein isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005158918.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCACGACG CATACGAACC AGTTCCCATC CTGGAGAAAC TGCCCCTCCA GATCGACTGT 
CTGGCGGCCT GGGATGATTG GCTCCTTGTG GGGACCAAAC CGGGTCATCT GCTTCAGTAC 
AGGATCAAGA AAGATGCCGG TACAAACAGG TTTGAAGTTA CATTAGAGAA ATCCAATAAG 
AACTTCTCCA AGAAGATTCA GCAGCTATTT GTAGTTTCAC AGTACAAGAT TTTGGTTAGT 
TTGTTGGAAA ACAACATCCA CGTTCACGAC CTGCTCACGT TCCAGCAGAT AACTGTGGTA 
TCAAAAGCTA AAGGGGCTAC ATTATTTGCC TGTGACCTGC AGTCTGAATC TGGTGAGGCT 
AAACTGCGCA TGTGTGTTGC AGTCAAGAGG AAAATTCAGC TCTATTACTG GAAGGACAGA 
GAATTCCACG AATTACAGGG AGATGTCACT GCTCCGGACA TTCCCAAGTC CATGGCGTGG 
TGTGAGAACT CTATATGCGT GGGTTTCAAA CGAGACTACT ATCTGATACG GATGGATGGA 
CGTGGCTCAA TCAAGGAACT GTTCCCCACA GGAAAACAGC TGGAGCCATT GGTGGCCCCA 
CTGGCTGATG GGAAGGTAGC AGTGGGTCAG GATGACCTCA CGGTTGTCTT AAATGAAGAA 
GGCGTCTGCA CTCAGAAATG TGCCCTCAAC TGGACTGACA TCCCTGTTGC AATGGAGCAC 
CAGCCACCAT ACATCATTGC AGTGTTACCG CGGTATGTGG AGATCCGCAC AGTCGAGCCC 
AGACTCCTGG TGCAGAGCGT AGAGCTGCAG AGACCACGCT TCATCACCTC CGCTGGGTCA 
AACGTTGTGT ATGTCGCTAG CAATCATTTT GTCTGGCGTT TGGTCCCGGT GTCTATAGCC 
AGCCAGATAC GGCAGCTGCT ACAGGACAAA CAGTTTGAAC TGGCACTTCA GCTAGCGAAA 
ATGAAGGATG ATTCCGATAC AGACAAGAGG CAACAGATCC ATCACATTCA GAACCTGTTT 
GCCTTCAACC TGTTCTGCCA GAAGCGCTTT GATGACTCCA TGCAGGGCTT TGCTAAGTTA 
GGGACAGATC CCACTCATGT TATTGGACTG TACCCAGACC TGCTCCCCTC CGACTATCGT 
AAACAGTTGC ACTACCCAAA CCCTCTGCCC CCGCTGTCTG GAGCTGAACT GGAGAAAGCC 
CACCTCGCCC TCATAGACTA CCTGACACAG AAACGCAGTC ATTTAGTGAA GCAGCTGAAC 
GACTCTGACC CGTCGACCAC CTCACCGCTA ATGGAGGGAA CGCCCACCAT CAAGAGCCGC 
AAGAAACTCC TGCAGATCAT CGACACCACC CTGCTCAAGT GTTACCTCCA TACCAATGTA 
GCCTTAGTGT CTCCTCTCCT GCGCCTGGAG AACAACCACT GTCACATCGA GGAGAGCGAG 
TATGTGCTGA AGAAAGCCCA CAAATACAGC GAACTCATCA TTCTCTATGA GAAAAAAGGC 
CTTCATCAGA AAGCTCTGCA GGTTCTGCTG GATCAGTCCA CCAAAGCCAA CTCGCCTCTG 
AAGGGTCACG AGAGGACAGT GCAGTACCTC CAGAGGCTCG GATTGGAGAA CCTGGGAATC 
ATCTTTGAGT TTTCGCCGTG GGTGTTGAAG ATTTGTCCAG AGGACGGCCT GAAGATTTTC 
ACGGAGGACC TAACGGAGGT GGAGACACTG CCCAGGGATC AAGTGTTGAA CTTTCTGAAG 
GAGGGCTTCA AGGAGCTGGC CATCCCATAC CTGGAGCACA TCATTCACAT GTGGGACGAG 
ACGCGGCCTG AGTTTCACAA CGTTCTGATC CAGCTCTACC TGGAGAAGGT GCAAGGGCTC 
ATGAAGGCGT ATCTCAACAC ACTGCCTGAA GGCATTCCAG CTGTAGCTGC AGGAAAAGAG 
AAAGGAGAGC TGGGCGAGTT CAGGAACAAA CTTCTGTCTT TCCTGGAAGT TTCCAGCAGT 
TACGAGCCAG AGATACTCAT CAGTGATTTC CCTTTCGACG GCCTGTTGGA GGAAAGAGCG 
CTTCTTTTGG GACGTATGGG GAAACACGAG CAGGCTCTGT TCATCTATGT CCACATCCTG 
AAGGACACGC GGATGGCTGA AGAGTACTGC CACGGTCATT ATGATCCTGC AACTAATGGC 
AATAAAGATG TGTATCTGTC ACTGCTGCGC ATGTATCTGT CTCCTCCTGA TGTTCATTTC 
CTCGGGCCCA TTAAGATGGA GCTATGCGAG CCACAGGCAA ACCTCCAGGC GGCGCTGAAC 
GTCCTTCAGC TTCACCACAG CAAACTCAAC ACCACCAAAG CCATAAACCT GCTGCCAGCC 
AACACACAGA TCCGAGAGAT CCAGGTGTTT CTGGAGAGCG TGCTGGAGGA GAAGGCTGGA 
CGCAAGCGCT TCGACCAGGT CCTGAAGAGC CTTCTACAGG CCGAGTTCCT GCGGGTGCAG 
GAGGAGCGTA TCTTTCACCA GCAGGTGAAG TGTGTGATCA CAGACGAGAA GACCTGCAGA 
GTGTGCAAGA AGAAGATTGG AAACAGTGCC TTTGCCAGGT ATCCAAACGG TGTGGTGGTC 
CACTACTTCT GCTGTAAAGA TCGCAACACA TGTCCAGCAG AGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005158975.1
CDS	520..3144
Translation	MHDAYEPVPILEKLPLQIDCLAAWDDWLLVGTKPGHLLQYRIKKDAGTNRFEVTLEKSNKNFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQSESGEAKLRMCVAVKRKIQLYYWKDREFHELQGDVTAPDIPKSMAWCENSICVGFKRDYYLIRMDGRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTVEPRLLVQSVELQRPRFITSAGSNVVYVASNHFVWRLVPVSIASQIRQLLQDKQFELALQLAKMKDDSDTDKRQQIHHIQNLFAFNLFCQKRFDDSMQGFAKLGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPPLSGAELEKAHLALIDYLTQKRSHLVKQLNDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEESEYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGLENLGIIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDQVLNFLKEGFKELAIPYLEHIIHMWDETRPEFHNVLIQLYLEKVQGLMKAYLNTLPEGIPAVAAGKEKGELGEFRNKLLSFLEVSSSYEPEILISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHGHYDPATNGNKDVYLSLLRMYLSPPDVHFLGPIKMELCEPQANLQAALNVLQLHHSKLNTTKAINLLPANTQIREIQVFLESVLEEKAGRKRFDQVLKSLLQAEFLRVQEERIFHQQVKCVITDEKTCRVCKKKIGNSAFARYPNGVVVHYFCCKDRNTCPAE

Target ORF information:

RefSeq Version	XM_005158918.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005158918.3

ORF Insert Sequence:

ATGCACGACG CATACGAACC AGTTCCCATC CTGGAGAAAC TGCCCCTCCA GATCGACTGT 
CTGGCGGCCT GGGATGATTG GCTCCTTGTG GGGACCAAAC CGGGTCATCT GCTTCAGTAC 
AGGATCAAGA AAGATGCCGG TACAAACAGG TTTGAAGTTA CATTAGAGAA ATCCAATAAG 
AACTTCTCCA AGAAGATTCA GCAGCTATTT GTAGTTTCAC AGTACAAGAT TTTGGTTAGT 
TTGTTGGAAA ACAACATCCA CGTTCACGAC CTGCTCACGT TCCAGCAGAT AACTGTGGTA 
TCAAAAGCTA AAGGGGCTAC ATTATTTGCC TGTGACCTGC AGTCTGAATC TGGTGAGGCT 
AAACTGCGCA TGTGTGTTGC AGTCAAGAGG AAAATTCAGC TCTATTACTG GAAGGACAGA 
GAATTCCACG AATTACAGGG AGATGTCACT GCTCCGGACA TTCCCAAGTC CATGGCGTGG 
TGTGAGAACT CTATATGCGT GGGTTTCAAA CGAGACTACT ATCTGATACG GATGGATGGA 
CGTGGCTCAA TCAAGGAACT GTTCCCCACA GGAAAACAGC TGGAGCCATT GGTGGCCCCA 
CTGGCTGATG GGAAGGTAGC AGTGGGTCAG GATGACCTCA CGGTTGTCTT AAATGAAGAA 
GGCGTCTGCA CTCAGAAATG TGCCCTCAAC TGGACTGACA TCCCTGTTGC AATGGAGCAC 
CAGCCACCAT ACATCATTGC AGTGTTACCG CGGTATGTGG AGATCCGCAC AGTCGAGCCC 
AGACTCCTGG TGCAGAGCGT AGAGCTGCAG AGACCACGCT TCATCACCTC CGCTGGGTCA 
AACGTTGTGT ATGTCGCTAG CAATCATTTT GTCTGGCGTT TGGTCCCGGT GTCTATAGCC 
AGCCAGATAC GGCAGCTGCT ACAGGACAAA CAGTTTGAAC TGGCACTTCA GCTAGCGAAA 
ATGAAGGATG ATTCCGATAC AGACAAGAGG CAACAGATCC ATCACATTCA GAACCTGTTT 
GCCTTCAACC TGTTCTGCCA GAAGCGCTTT GATGACTCCA TGCAGGGCTT TGCTAAGTTA 
GGGACAGATC CCACTCATGT TATTGGACTG TACCCAGACC TGCTCCCCTC CGACTATCGT 
AAACAGTTGC ACTACCCAAA CCCTCTGCCC CCGCTGTCTG GAGCTGAACT GGAGAAAGCC 
CACCTCGCCC TCATAGACTA CCTGACACAG AAACGCAGTC ATTTAGTGAA GCAGCTGAAC 
GACTCTGACC CGTCGACCAC CTCACCGCTA ATGGAGGGAA CGCCCACCAT CAAGAGCCGC 
AAGAAACTCC TGCAGATCAT CGACACCACC CTGCTCAAGT GTTACCTCCA TACCAATGTA 
GCCTTAGTGT CTCCTCTCCT GCGCCTGGAG AACAACCACT GTCACATCGA GGAGAGCGAG 
TATGTGCTGA AGAAAGCCCA CAAATACAGC GAACTCATCA TTCTCTATGA GAAAAAAGGC 
CTTCATCAGA AAGCTCTGCA GGTTCTGCTG GATCAGTCCA CCAAAGCCAA CTCGCCTCTG 
AAGGGTCACG AGAGGACAGT GCAGTACCTC CAGAGGCTCG GATTGGAGAA CCTGGGAATC 
ATCTTTGAGT TTTCGCCGTG GGTGTTGAAG ATTTGTCCAG AGGACGGCCT GAAGATTTTC 
ACGGAGGACC TAACGGAGGT GGAGACACTG CCCAGGGATC AAGTGTTGAA CTTTCTGAAG 
GAGGGCTTCA AGGAGCTGGC CATCCCATAC CTGGAGCACA TCATTCACAT GTGGGACGAG 
ACGCGGCCTG AGTTTCACAA CGTTCTGATC CAGCTCTACC TGGAGAAGGT GCAAGGGCTC 
ATGAAGGCGT ATCTCAACAC ACTGCCTGAA GGCATTCCAG CTGTAGCTGC AGGAAAAGAG 
AAAGGAGAGC TGGGCGAGTT CAGGAACAAA CTTCTGTCTT TCCTGGAAGT TTCCAGCAGT 
TACGAGCCAG AGATACTCAT CAGTGATTTC CCTTTCGACG GCCTGTTGGA GGAAAGAGCG 
CTTCTTTTGG GACGTATGGG GAAACACGAG CAGGCTCTGT TCATCTATGT CCACATCCTG 
AAGGACACGC GGATGGCTGA AGAGTACTGC CACGGTCATT ATGATCCTGC AACTAATGGC 
AATAAAGATG TGTATCTGTC ACTGCTGCGC ATGTATCTGT CTCCTCCTGA TGTTCATTTC 
CTCGGGCCCA TTAAGATGGA GCTATGCGAG CCACAGGCAA ACCTCCAGGC GGCGCTGAAC 
GTCCTTCAGC TTCACCACAG CAAACTCAAC ACCACCAAAG CCATAAACCT GCTGCCAGCC 
AACACACAGA TCCGAGAGAT CCAGGTGTTT CTGGAGAGCG TGCTGGAGGA GAAGGCTGGA 
CGCAAGCGCT TCGACCAGGT CCTGAAGAGC CTTCTACAGG CCGAGTTCCT GCGGGTGCAG 
GAGGAGCGTA TCTTTCACCA GCAGGTGAAG TGTGTGATCA CAGACGAGAA GACCTGCAGA 
GTGTGCAAGA AGAAGATTGG AAACAGTGCC TTTGCCAGGT ATCCAAACGG TGTGGTGGTC 
CACTACTTCT GCTGTAAAGA TCGCAACACA TGTCCAGCAG AGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

vps39 ( XM_017351662.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_017207151.1 Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa55604
Clone ID Related Accession (Same CDS sequence)	XM_017351662.1
Accession Version	XM_017351662.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2628bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	vam6/Vps39-like protein isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCACGACG CATACGAACC AGTTCCCATC CTGGAGAAAC TGCCCCTCCA GATCGACTGT 
CTGGCGGCCT GGGATGATTG GCTCCTTGTG GGGACCAAAC CGGGTCATCT GCTTCAGTAC 
AGGATCAAGA AAGATGCCGG TACAAACAGG TTTGAAGTTA CATTAGAGAA ATCCAATAAG 
AACTTCTCCA AGAAGATTCA GCAGCTATTT GTAGTTTCAC AGTACAAGAT TTTGGTTAGT 
TTGTTGGAAA ACAACATCCA CGTTCACGAC CTGCTCACGT TCCAGCAGAT AACTGTGGTA 
TCAAAAGCTA AAGGGGCTAC ATTATTTGCC TGTGACCTGC AGCAGTCTGA ATCTGGTGAG 
GCTAAACTGC GCATGTGTGT TGCAGTCAAG AGGAAAATTC AGCTCTATTA CTGGAAGGAC 
AGAGAATTCC ACGAATTACA GGGAGATGTC ACTGCTCCGG ACATTCCCAA GTCCATGGCG 
TGGTGTGAGA ACTCTATATG CGTGGGTTTC AAACGAGACT ACTATCTGAT ACGGATGGAT 
GGACGTGGCT CAATCAAGGA ACTGTTCCCC ACAGGAAAAC AGCTGGAGCC ATTGGTGGCC 
CCACTGGCTG ATGGGAAGGT AGCAGTGGGT CAGGATGACC TCACGGTTGT CTTAAATGAA 
GAAGGCGTCT GCACTCAGAA ATGTGCCCTC AACTGGACTG ACATCCCTGT TGCAATGGAG 
CACCAGCCAC CATACATCAT TGCAGTGTTA CCGCGGTATG TGGAGATCCG CACAGTCGAG 
CCCAGACTCC TGGTGCAGAG CGTAGAGCTG CAGAGACCAC GCTTCATCAC CTCCGCTGGG 
TCAAACGTTG TGTATGTCGC TAGCAATCAT TTTGTCTGGC GTTTGGTCCC GGTGTCTATA 
GCCAGCCAGA TACGGCAGCT GCTACAGGAC AAACAGTTTG AACTGGCACT TCAGCTAGCG 
AAAATGAAGG ATGATTCCGA TACAGACAAG AGGCAACAGA TCCATCACAT TCAGAACCTG 
TTTGCCTTCA ACCTGTTCTG CCAGAAGCGC TTTGATGACT CCATGCAGGG CTTTGCTAAG 
TTAGGGACAG ATCCCACTCA TGTTATTGGA CTGTACCCAG ACCTGCTCCC CTCCGACTAT 
CGTAAACAGT TGCACTACCC AAACCCTCTG CCCCCGCTGT CTGGAGCTGA ACTGGAGAAA 
GCCCACCTCG CCCTCATAGA CTACCTGACA CAGAAACGCA GTCATTTAGT GAAGCAGCTG 
AACGACTCTG ACCCGTCGAC CACCTCACCG CTAATGGAGG GAACGCCCAC CATCAAGAGC 
CGCAAGAAAC TCCTGCAGAT CATCGACACC ACCCTGCTCA AGTGTTACCT CCATACCAAT 
GTAGCCTTAG TGTCTCCTCT CCTGCGCCTG GAGAACAACC ACTGTCACAT CGAGGAGAGC 
GAGTATGTGC TGAAGAAAGC CCACAAATAC AGCGAACTCA TCATTCTCTA TGAGAAAAAA 
GGCCTTCATC AGAAAGCTCT GCAGGTTCTG CTGGATCAGT CCACCAAAGC CAACTCGCCT 
CTGAAGGGTC ACGAGAGGAC AGTGCAGTAC CTCCAGAGGC TCGGATTGGA GAACCTGGGA 
ATCATCTTTG AGTTTTCGCC GTGGGTGTTG AAGATTTGTC CAGAGGACGG CCTGAAGATT 
TTCACGGAGG ACCTAACGGA GGTGGAGACA CTGCCCAGGG ATCAAGTGTT GAACTTTCTG 
AAGGAGGGCT TCAAGGAGCT GGCCATCCCA TACCTGGAGC ACATCATTCA CATGTGGGAC 
GAGACGCGGC CTGAGTTTCA CAACGTTCTG ATCCAGCTCT ACCTGGAGAA GGTGCAAGGG 
CTCATGAAGG CGTATCTCAA CACACTGCCT GAAGGCATTC CAGCTGTAGC TGCAGGAAAA 
GAGAAAGGAG AGCTGGGCGA GTTCAGGAAC AAACTTCTGT CTTTCCTGGA AGTTTCCAGC 
AGTTACGAGC CAGAGATACT CATCAGTGAT TTCCCTTTCG ACGGCCTGTT GGAGGAAAGA 
GCGCTTCTTT TGGGACGTAT GGGGAAACAC GAGCAGGCTC TGTTCATCTA TGTCCACATC 
CTGAAGGACA CGCGGATGGC TGAAGAGTAC TGCCACGGTC ATTATGATCC TGCAACTAAT 
GGCAATAAAG ATGTGTATCT GTCACTGCTG CGCATGTATC TGTCTCCTCC TGATGTTCAT 
TTCCTCGGGC CCATTAAGAT GGAGCTATGC GAGCCACAGG CAAACCTCCA GGCGGCGCTG 
AACGTCCTTC AGCTTCACCA CAGCAAACTC AACACCACCA AAGCCATAAA CCTGCTGCCA 
GCCAACACAC AGATCCGAGA GATCCAGGTG TTTCTGGAGA GCGTGCTGGA GGAGAAGGCT 
GGACGCAAGC GCTTCGACCA GGTCCTGAAG AGCCTTCTAC AGGCCGAGTT CCTGCGGGTG 
CAGGAGGAGC GTATCTTTCA CCAGCAGGTG AAGTGTGTGA TCACAGACGA GAAGACCTGC 
AGAGTGTGCA AGAAGAAGAT TGGAAACAGT GCCTTTGCCA GGTATCCAAA CGGTGTGGTG 
GTCCACTACT TCTGCTGTAA AGATCGCAAC ACATGTCCAG CAGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017207151.1
CDS	520..3147
Translation	MHDAYEPVPILEKLPLQIDCLAAWDDWLLVGTKPGHLLQYRIKKDAGTNRFEVTLEKSNKNFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQSESGEAKLRMCVAVKRKIQLYYWKDREFHELQGDVTAPDIPKSMAWCENSICVGFKRDYYLIRMDGRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTVEPRLLVQSVELQRPRFITSAGSNVVYVASNHFVWRLVPVSIASQIRQLLQDKQFELALQLAKMKDDSDTDKRQQIHHIQNLFAFNLFCQKRFDDSMQGFAKLGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPPLSGAELEKAHLALIDYLTQKRSHLVKQLNDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEESEYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGLENLGIIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDQVLNFLKEGFKELAIPYLEHIIHMWDETRPEFHNVLIQLYLEKVQGLMKAYLNTLPEGIPAVAAGKEKGELGEFRNKLLSFLEVSSSYEPEILISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHGHYDPATNGNKDVYLSLLRMYLSPPDVHFLGPIKMELCEPQANLQAALNVLQLHHSKLNTTKAINLLPANTQIREIQVFLESVLEEKAGRKRFDQVLKSLLQAEFLRVQEERIFHQQVKCVITDEKTCRVCKKKIGNSAFARYPNGVVVHYFCCKDRNTCPAE

Target ORF information:

RefSeq Version	XM_017351662.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio vacuolar protein sorting 39 homolog (S. cerevisiae) (vps39), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017351662.1

ORF Insert Sequence:

ATGCACGACG CATACGAACC AGTTCCCATC CTGGAGAAAC TGCCCCTCCA GATCGACTGT 
CTGGCGGCCT GGGATGATTG GCTCCTTGTG GGGACCAAAC CGGGTCATCT GCTTCAGTAC 
AGGATCAAGA AAGATGCCGG TACAAACAGG TTTGAAGTTA CATTAGAGAA ATCCAATAAG 
AACTTCTCCA AGAAGATTCA GCAGCTATTT GTAGTTTCAC AGTACAAGAT TTTGGTTAGT 
TTGTTGGAAA ACAACATCCA CGTTCACGAC CTGCTCACGT TCCAGCAGAT AACTGTGGTA 
TCAAAAGCTA AAGGGGCTAC ATTATTTGCC TGTGACCTGC AGCAGTCTGA ATCTGGTGAG 
GCTAAACTGC GCATGTGTGT TGCAGTCAAG AGGAAAATTC AGCTCTATTA CTGGAAGGAC 
AGAGAATTCC ACGAATTACA GGGAGATGTC ACTGCTCCGG ACATTCCCAA GTCCATGGCG 
TGGTGTGAGA ACTCTATATG CGTGGGTTTC AAACGAGACT ACTATCTGAT ACGGATGGAT 
GGACGTGGCT CAATCAAGGA ACTGTTCCCC ACAGGAAAAC AGCTGGAGCC ATTGGTGGCC 
CCACTGGCTG ATGGGAAGGT AGCAGTGGGT CAGGATGACC TCACGGTTGT CTTAAATGAA 
GAAGGCGTCT GCACTCAGAA ATGTGCCCTC AACTGGACTG ACATCCCTGT TGCAATGGAG 
CACCAGCCAC CATACATCAT TGCAGTGTTA CCGCGGTATG TGGAGATCCG CACAGTCGAG 
CCCAGACTCC TGGTGCAGAG CGTAGAGCTG CAGAGACCAC GCTTCATCAC CTCCGCTGGG 
TCAAACGTTG TGTATGTCGC TAGCAATCAT TTTGTCTGGC GTTTGGTCCC GGTGTCTATA 
GCCAGCCAGA TACGGCAGCT GCTACAGGAC AAACAGTTTG AACTGGCACT TCAGCTAGCG 
AAAATGAAGG ATGATTCCGA TACAGACAAG AGGCAACAGA TCCATCACAT TCAGAACCTG 
TTTGCCTTCA ACCTGTTCTG CCAGAAGCGC TTTGATGACT CCATGCAGGG CTTTGCTAAG 
TTAGGGACAG ATCCCACTCA TGTTATTGGA CTGTACCCAG ACCTGCTCCC CTCCGACTAT 
CGTAAACAGT TGCACTACCC AAACCCTCTG CCCCCGCTGT CTGGAGCTGA ACTGGAGAAA 
GCCCACCTCG CCCTCATAGA CTACCTGACA CAGAAACGCA GTCATTTAGT GAAGCAGCTG 
AACGACTCTG ACCCGTCGAC CACCTCACCG CTAATGGAGG GAACGCCCAC CATCAAGAGC 
CGCAAGAAAC TCCTGCAGAT CATCGACACC ACCCTGCTCA AGTGTTACCT CCATACCAAT 
GTAGCCTTAG TGTCTCCTCT CCTGCGCCTG GAGAACAACC ACTGTCACAT CGAGGAGAGC 
GAGTATGTGC TGAAGAAAGC CCACAAATAC AGCGAACTCA TCATTCTCTA TGAGAAAAAA 
GGCCTTCATC AGAAAGCTCT GCAGGTTCTG CTGGATCAGT CCACCAAAGC CAACTCGCCT 
CTGAAGGGTC ACGAGAGGAC AGTGCAGTAC CTCCAGAGGC TCGGATTGGA GAACCTGGGA 
ATCATCTTTG AGTTTTCGCC GTGGGTGTTG AAGATTTGTC CAGAGGACGG CCTGAAGATT 
TTCACGGAGG ACCTAACGGA GGTGGAGACA CTGCCCAGGG ATCAAGTGTT GAACTTTCTG 
AAGGAGGGCT TCAAGGAGCT GGCCATCCCA TACCTGGAGC ACATCATTCA CATGTGGGAC 
GAGACGCGGC CTGAGTTTCA CAACGTTCTG ATCCAGCTCT ACCTGGAGAA GGTGCAAGGG 
CTCATGAAGG CGTATCTCAA CACACTGCCT GAAGGCATTC CAGCTGTAGC TGCAGGAAAA 
GAGAAAGGAG AGCTGGGCGA GTTCAGGAAC AAACTTCTGT CTTTCCTGGA AGTTTCCAGC 
AGTTACGAGC CAGAGATACT CATCAGTGAT TTCCCTTTCG ACGGCCTGTT GGAGGAAAGA 
GCGCTTCTTT TGGGACGTAT GGGGAAACAC GAGCAGGCTC TGTTCATCTA TGTCCACATC 
CTGAAGGACA CGCGGATGGC TGAAGAGTAC TGCCACGGTC ATTATGATCC TGCAACTAAT 
GGCAATAAAG ATGTGTATCT GTCACTGCTG CGCATGTATC TGTCTCCTCC TGATGTTCAT 
TTCCTCGGGC CCATTAAGAT GGAGCTATGC GAGCCACAGG CAAACCTCCA GGCGGCGCTG 
AACGTCCTTC AGCTTCACCA CAGCAAACTC AACACCACCA AAGCCATAAA CCTGCTGCCA 
GCCAACACAC AGATCCGAGA GATCCAGGTG TTTCTGGAGA GCGTGCTGGA GGAGAAGGCT 
GGACGCAAGC GCTTCGACCA GGTCCTGAAG AGCCTTCTAC AGGCCGAGTT CCTGCGGGTG 
CAGGAGGAGC GTATCTTTCA CCAGCAGGTG AAGTGTGTGA TCACAGACGA GAAGACCTGC 
AGAGTGTGCA AGAAGAAGAT TGGAAACAGT GCCTTTGCCA GGTATCCAAA CGGTGTGGTG 
GTCCACTACT TCTGCTGTAA AGATCGCAAC ACATGTCCAG CAGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

The zebrafish mutant lbk/vam6 resembles human multisystemic disorders caused by aberrant trafficking of endosomal vesicles.
Development (Cambridge, England)135(2)387-99(2008 Jan)
Schonthaler HB,Fleisch VC,Biehlmaier O,Makhankov Y,Rinner O,Bahadori R,Geisler R,Schwarz H,Neuhauss SC,Dahm R

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vps39 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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