dpf3 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	dpf3
Entrez Gene ID	562738
Full Name	D4, zinc and double PHD fingers, family 3
Synonyms	si:ch211-268e23.1,wu:fj43h12
General protein information	Preferred Names D4, zinc and double PHD fingers, family 3 Names zinc finger protein DPF3 D4 zinc and double PHD fingers family 3 protein fj43h12
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009294765.2	XP_009293040.1	zinc finger protein DPF3 isoform X4
XM_009294764.2	XP_009293039.1	zinc finger protein DPF3 isoform X2
NM_001111169.1	NP_001104639.1	zinc finger protein DPF3
XM_005160743.3	XP_005160800.1	zinc finger protein DPF3 isoform X1
XM_005160744.3	XP_005160801.1	zinc finger protein DPF3 isoform X3
XM_005160743.4	XP_005160800.1	zinc finger protein DPF3 isoform X1
XM_009294764.3	XP_009293039.1	zinc finger protein DPF3 isoform X2
XM_005160744.4	XP_005160801.1	zinc finger protein DPF3 isoform X3

Pathways from BioSystems

Homologies

Homo sapiens (human)	DPF3	NP_001267471.1
Gallus gallus (chicken)	DPF3	NP_989970.1
Danio rerio (zebrafish)	dpf3	NP_001104639.1
Caenorhabditis elegans (roundworm)	dpff-1	NP_498281.2
Pan troglodytes (chimpanzee)	DPF3	XP_001140541.2
Canis lupus familiaris (dog)	DPF3	XP_854603.3
Xenopus tropicalis (tropical clawed frog)	LOC100125167	NP_001265342.1
Bos taurus (cattle)	DPF3	XP_002691098.2
Mus musculus (house mouse)	Dpf3	NP_001254554.1

Gene Ontology
Bibliography

Related articles in PubMed

DPFF-1 transcription factor deficiency causes the aberrant activation of MPK-1 and meiotic defects in the Caenorhabditis elegans germline.
Villanueva-Chimal E, Salinas LS, Fern?ndez-Cardenas LP, Huelgas-Morales G, Cabrera-Wrooman A, Navarro RE
Genesis (New York, N.Y. : 2000)55(11)(2017 Nov)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Identification of vascular and hematopoietic genes downstream of etsrp by deep sequencing in zebrafish.
Gomez G, Lee JH, Veldman MB, Lu J, Xiao X, Lin S
PloS one7(3)e31658(2012)

Regulation of muscle development by DPF3, a novel histone acetylation and methylation reader of the BAF chromatin remodeling complex.
Lange M, Kaynak B, Forster UB, T?njes M, Fischer JJ, Grimm C, Schlesinger J, Just S, Dunkel I, Krueger T, Mebus S, Lehrach H, Lurz R, Gobom J, Rottbauer W, Abdelilah-Seyfried S, Sperling S
Genes & development22(17)2370-84(2008 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

DPF3 adds a further layer of complexity to the BAF complex by representing a tissue-specific anchor between histone acetylations as well as methylations and chromatin remodeling.
Title: Regulation of muscle development by DPF3, a novel histone acetylation and methylation reader of the BAF chromatin remodeling complex.

The following dpf3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the dpf3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa38816	NM_001111169.1 Latest version!	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa25018	XM_005160743.4 Latest version!	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa25019	XM_005160744.4 Latest version!	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa43878	XM_009294764.3 Latest version!	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa43879	XM_009294765.2 Latest version!	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
View Old Accession Versions >>
ODa25018	XM_005160743.3	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa43878	XM_009294764.2	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
ODa25019	XM_005160744.3	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

dpf3 ( NM_001111169.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001104639.1 Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), mRNA.

Price & Availability↑

CloneID	ODa38816
Clone ID Related Accession (Same CDS sequence)	NM_001111169.1
Accession Version	NM_001111169.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1176bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	zinc finger protein DPF3
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU245032.1. On Dec 12, 2007 this sequence version replaced XM_686113.2. ##Evidence-Data-START## Transcript exon combination :: EU245032.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACAACAGAT ACAAACAAAA GCATAACTCA AAAACCGCTG ACTCAGTTTG TGGCAAGCGT 
TACAAAAACC GTCCTGGACT AAGCTACCAT TACGCCCATA CTCACCTTGC TGAAGAGGAA 
GGTGAGGAAG AACGGGAAAC CGAAATCCCT CAATCTCCTC CTGTCCATCA TGAGAATCAT 
AAACCACAGA AAGCGCCTGA TGGTTCGATC ATCCCTAATG ACTACTGTGA CTTCTGTCTG 
GGAGACTCAG GCTCTAACAG GAAGACAGGC CAGGCCGAGG AGCTGGTTTC CTGTTCAGAC 
TGCGGCCGCT CTGGCCACCC TTCATGCCTG CAGTTCACAG ACAACATGAT GCAGGCTGTG 
CGAACCTACC AGTGGCAGTG CATCGAGTGT AAATCCTGCA GTCTGTGCGG CACCTCTGAG 
AATGATGATC AGCTTCTGTT CTGTGATGAC TGTGATCGGG GATACCACAT GTACTGCCTT 
AAACCTCCTA TGACACAGCC ACCAGAGGGA AGTTGGAGTT GTCATCTGTG CCAGAATCTG 
CTTAAGGATA AAGCGTCTGG TGTTGAAGAT CCATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001104639.1
CDS	1..1176
Translation	MATVIQNPLKALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPLDPQLRLCELRLEAELMAKREAPQTEATALEALLRGDGILDKRNNNAKEEETLLEIQRVLEADENGDGFHDDEDFEVDTPKRKHRNKGRGRGSGRRRTEAVANDDQDKPYVCDNRYKQKHNSKTADSVCGKRYKNRPGLSYHYAHTHLAEEEGEEERETEIPQSPPVHHENHKPQKAPDGSIIPNDYCDFCLGDSGSNRKTGQAEELVSCSDCGRSGHPSCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGSWSCHLCQNLLKDKASGVEDP

Target ORF information:

RefSeq Version	NM_001111169.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001111169.1

ORF Insert Sequence:

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACAACAGAT ACAAACAAAA GCATAACTCA AAAACCGCTG ACTCAGTTTG TGGCAAGCGT 
TACAAAAACC GTCCTGGACT AAGCTACCAT TACGCCCATA CTCACCTTGC TGAAGAGGAA 
GGTGAGGAAG AACGGGAAAC CGAAATCCCT CAATCTCCTC CTGTCCATCA TGAGAATCAT 
AAACCACAGA AAGCGCCTGA TGGTTCGATC ATCCCTAATG ACTACTGTGA CTTCTGTCTG 
GGAGACTCAG GCTCTAACAG GAAGACAGGC CAGGCCGAGG AGCTGGTTTC CTGTTCAGAC 
TGCGGCCGCT CTGGCCACCC TTCATGCCTG CAGTTCACAG ACAACATGAT GCAGGCTGTG 
CGAACCTACC AGTGGCAGTG CATCGAGTGT AAATCCTGCA GTCTGTGCGG CACCTCTGAG 
AATGATGATC AGCTTCTGTT CTGTGATGAC TGTGATCGGG GATACCACAT GTACTGCCTT 
AAACCTCCTA TGACACAGCC ACCAGAGGGA AGTTGGAGTT GTCATCTGTG CCAGAATCTG 
CTTAAGGATA AAGCGTCTGG TGTTGAAGAT CCATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

dpf3 ( XM_005160743.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005160800.1 Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa25018
Clone ID Related Accession (Same CDS sequence)	XM_005160743.3 , XM_005160743.4
Accession Version	XM_005160743.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1134bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	zinc finger protein DPF3 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007131.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005160743.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACATTTGTG GCAAGCGTTA CAAAAACCGT CCTGGACTAA GCTACCATTA CGCCCATACT 
CACCTTGCTG AAGAGGAAGG TGAGGAAGAA CGGGAAACCG AAATCCCTCA ATCTCCTCCT 
GTCCATCATG AGAATCATAA ACCACAGAAA GCGCCTGATG GTTCGATCAT CCCTAATGAC 
TACTGTGACT TCTGTCTGGG AGACTCAGGC TCTAACAGGA AGACAGGCCA GGCCGAGGAG 
CTGGTTTCCT GTTCAGACTG CGGCCGCTCT GGCCACCCTT CATGCCTGCA GTTCACAGAC 
AACATGATGC AGGCTGTGCG AACCTACCAG TGGCAGTGCA TCGAGTGTAA ATCCTGCAGT 
CTGTGCGGCA CCTCTGAGAA TGATGATCAG CTTCTGTTCT GTGATGACTG TGATCGGGGA 
TACCACATGT ACTGCCTTAA ACCTCCTATG ACACAGCCAC CAGAGGGAAG TTGGAGTTGT 
CATCTGTGCC AGAATCTGCT TAAGGATAAA GCGTCTGGTG TTGAAGATCC ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005160800.1
CDS	76..1209
Translation	MATVIQNPLKALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPLDPQLRLCELRLEAELMAKREAPQTEATALEALLRGDGILDKRNNNAKEEETLLEIQRVLEADENGDGFHDDEDFEVDTPKRKHRNKGRGRGSGRRRTEAVANDDQDKPYVCDICGKRYKNRPGLSYHYAHTHLAEEEGEEERETEIPQSPPVHHENHKPQKAPDGSIIPNDYCDFCLGDSGSNRKTGQAEELVSCSDCGRSGHPSCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGSWSCHLCQNLLKDKASGVEDP

Target ORF information:

RefSeq Version	XM_005160743.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005160743.3

ORF Insert Sequence:

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACATTTGTG GCAAGCGTTA CAAAAACCGT CCTGGACTAA GCTACCATTA CGCCCATACT 
CACCTTGCTG AAGAGGAAGG TGAGGAAGAA CGGGAAACCG AAATCCCTCA ATCTCCTCCT 
GTCCATCATG AGAATCATAA ACCACAGAAA GCGCCTGATG GTTCGATCAT CCCTAATGAC 
TACTGTGACT TCTGTCTGGG AGACTCAGGC TCTAACAGGA AGACAGGCCA GGCCGAGGAG 
CTGGTTTCCT GTTCAGACTG CGGCCGCTCT GGCCACCCTT CATGCCTGCA GTTCACAGAC 
AACATGATGC AGGCTGTGCG AACCTACCAG TGGCAGTGCA TCGAGTGTAA ATCCTGCAGT 
CTGTGCGGCA CCTCTGAGAA TGATGATCAG CTTCTGTTCT GTGATGACTG TGATCGGGGA 
TACCACATGT ACTGCCTTAA ACCTCCTATG ACACAGCCAC CAGAGGGAAG TTGGAGTTGT 
CATCTGTGCC AGAATCTGCT TAAGGATAAA GCGTCTGGTG TTGAAGATCC ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

dpf3 ( XM_005160743.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005160800.1 Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa25018
Clone ID Related Accession (Same CDS sequence)	XM_005160743.3 , XM_005160743.4
Accession Version	XM_005160743.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1134bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	zinc finger protein DPF3 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007131.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005160743.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACATTTGTG GCAAGCGTTA CAAAAACCGT CCTGGACTAA GCTACCATTA CGCCCATACT 
CACCTTGCTG AAGAGGAAGG TGAGGAAGAA CGGGAAACCG AAATCCCTCA ATCTCCTCCT 
GTCCATCATG AGAATCATAA ACCACAGAAA GCGCCTGATG GTTCGATCAT CCCTAATGAC 
TACTGTGACT TCTGTCTGGG AGACTCAGGC TCTAACAGGA AGACAGGCCA GGCCGAGGAG 
CTGGTTTCCT GTTCAGACTG CGGCCGCTCT GGCCACCCTT CATGCCTGCA GTTCACAGAC 
AACATGATGC AGGCTGTGCG AACCTACCAG TGGCAGTGCA TCGAGTGTAA ATCCTGCAGT 
CTGTGCGGCA CCTCTGAGAA TGATGATCAG CTTCTGTTCT GTGATGACTG TGATCGGGGA 
TACCACATGT ACTGCCTTAA ACCTCCTATG ACACAGCCAC CAGAGGGAAG TTGGAGTTGT 
CATCTGTGCC AGAATCTGCT TAAGGATAAA GCGTCTGGTG TTGAAGATCC ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005160800.1
CDS	110..1243
Translation	MATVIQNPLKALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPLDPQLRLCELRLEAELMAKREAPQTEATALEALLRGDGILDKRNNNAKEEETLLEIQRVLEADENGDGFHDDEDFEVDTPKRKHRNKGRGRGSGRRRTEAVANDDQDKPYVCDICGKRYKNRPGLSYHYAHTHLAEEEGEEERETEIPQSPPVHHENHKPQKAPDGSIIPNDYCDFCLGDSGSNRKTGQAEELVSCSDCGRSGHPSCLQFTDNMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGSWSCHLCQNLLKDKASGVEDP

Target ORF information:

RefSeq Version	XM_005160743.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005160743.4

ORF Insert Sequence:

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACATTTGTG GCAAGCGTTA CAAAAACCGT CCTGGACTAA GCTACCATTA CGCCCATACT 
CACCTTGCTG AAGAGGAAGG TGAGGAAGAA CGGGAAACCG AAATCCCTCA ATCTCCTCCT 
GTCCATCATG AGAATCATAA ACCACAGAAA GCGCCTGATG GTTCGATCAT CCCTAATGAC 
TACTGTGACT TCTGTCTGGG AGACTCAGGC TCTAACAGGA AGACAGGCCA GGCCGAGGAG 
CTGGTTTCCT GTTCAGACTG CGGCCGCTCT GGCCACCCTT CATGCCTGCA GTTCACAGAC 
AACATGATGC AGGCTGTGCG AACCTACCAG TGGCAGTGCA TCGAGTGTAA ATCCTGCAGT 
CTGTGCGGCA CCTCTGAGAA TGATGATCAG CTTCTGTTCT GTGATGACTG TGATCGGGGA 
TACCACATGT ACTGCCTTAA ACCTCCTATG ACACAGCCAC CAGAGGGAAG TTGGAGTTGT 
CATCTGTGCC AGAATCTGCT TAAGGATAAA GCGTCTGGTG TTGAAGATCC ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

dpf3 ( XM_005160744.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005160801.1 Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa25019
Clone ID Related Accession (Same CDS sequence)	XM_005160744.3 , XM_005160744.4
Accession Version	XM_005160744.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1035bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	zinc finger protein DPF3 isoform X3
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007131.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005160744.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACATTTGTG GCAAGCGTTA CAAAAACCGT CCTGGACTAA GCTACCATTA CGCCCATACT 
CACCTTGCTG AAGAGGAAGG TGAGGAAGAA CGGGAAACCG AAATCCCTCA ATCTCCTCCT 
GTCCATCATG AGAATCATAA ACCACAGAAA GCGCCTGATG GTTCGATCAT CCCTAATGAC 
TACTGTGACT TCTGTCTGGG AGACTCAGGC TCTAACAGGA AGACAGGCCA GGCCGAGGAG 
CTGGTTTCCT GTTCAGACTG CGGCCGCTCT GCTGATCGGG TCGGTGGGAC CAGGGCGAAG 
AGGAGGACGG CGGGAGTTCT GGACATGTTC GGAGACACGT CAGAAAGCGA GGCATCCACC 
TTTCACGGCT TTGAAGAGGA CGACCTGAAC GGGCTTCTGT CCGACGACAG CACAGGCTCA 
CCTGAGTACA GATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005160801.1
CDS	76..1110
Translation	MATVIQNPLKALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPLDPQLRLCELRLEAELMAKREAPQTEATALEALLRGDGILDKRNNNAKEEETLLEIQRVLEADENGDGFHDDEDFEVDTPKRKHRNKGRGRGSGRRRTEAVANDDQDKPYVCDICGKRYKNRPGLSYHYAHTHLAEEEGEEERETEIPQSPPVHHENHKPQKAPDGSIIPNDYCDFCLGDSGSNRKTGQAEELVSCSDCGRSADRVGGTRAKRRTAGVLDMFGDTSESEASTFHGFEEDDLNGLLSDDSTGSPEYR

Target ORF information:

RefSeq Version	XM_005160744.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005160744.3

ORF Insert Sequence:

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACATTTGTG GCAAGCGTTA CAAAAACCGT CCTGGACTAA GCTACCATTA CGCCCATACT 
CACCTTGCTG AAGAGGAAGG TGAGGAAGAA CGGGAAACCG AAATCCCTCA ATCTCCTCCT 
GTCCATCATG AGAATCATAA ACCACAGAAA GCGCCTGATG GTTCGATCAT CCCTAATGAC 
TACTGTGACT TCTGTCTGGG AGACTCAGGC TCTAACAGGA AGACAGGCCA GGCCGAGGAG 
CTGGTTTCCT GTTCAGACTG CGGCCGCTCT GCTGATCGGG TCGGTGGGAC CAGGGCGAAG 
AGGAGGACGG CGGGAGTTCT GGACATGTTC GGAGACACGT CAGAAAGCGA GGCATCCACC 
TTTCACGGCT TTGAAGAGGA CGACCTGAAC GGGCTTCTGT CCGACGACAG CACAGGCTCA 
CCTGAGTACA GATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

dpf3 ( XM_005160744.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005160801.1 Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa25019
Clone ID Related Accession (Same CDS sequence)	XM_005160744.3 , XM_005160744.4
Accession Version	XM_005160744.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1035bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	zinc finger protein DPF3 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007131.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005160744.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACATTTGTG GCAAGCGTTA CAAAAACCGT CCTGGACTAA GCTACCATTA CGCCCATACT 
CACCTTGCTG AAGAGGAAGG TGAGGAAGAA CGGGAAACCG AAATCCCTCA ATCTCCTCCT 
GTCCATCATG AGAATCATAA ACCACAGAAA GCGCCTGATG GTTCGATCAT CCCTAATGAC 
TACTGTGACT TCTGTCTGGG AGACTCAGGC TCTAACAGGA AGACAGGCCA GGCCGAGGAG 
CTGGTTTCCT GTTCAGACTG CGGCCGCTCT GCTGATCGGG TCGGTGGGAC CAGGGCGAAG 
AGGAGGACGG CGGGAGTTCT GGACATGTTC GGAGACACGT CAGAAAGCGA GGCATCCACC 
TTTCACGGCT TTGAAGAGGA CGACCTGAAC GGGCTTCTGT CCGACGACAG CACAGGCTCA 
CCTGAGTACA GATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005160801.1
CDS	110..1144
Translation	MATVIQNPLKALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPLDPQLRLCELRLEAELMAKREAPQTEATALEALLRGDGILDKRNNNAKEEETLLEIQRVLEADENGDGFHDDEDFEVDTPKRKHRNKGRGRGSGRRRTEAVANDDQDKPYVCDICGKRYKNRPGLSYHYAHTHLAEEEGEEERETEIPQSPPVHHENHKPQKAPDGSIIPNDYCDFCLGDSGSNRKTGQAEELVSCSDCGRSADRVGGTRAKRRTAGVLDMFGDTSESEASTFHGFEEDDLNGLLSDDSTGSPEYR

Target ORF information:

RefSeq Version	XM_005160744.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005160744.4

ORF Insert Sequence:

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACATTTGTG GCAAGCGTTA CAAAAACCGT CCTGGACTAA GCTACCATTA CGCCCATACT 
CACCTTGCTG AAGAGGAAGG TGAGGAAGAA CGGGAAACCG AAATCCCTCA ATCTCCTCCT 
GTCCATCATG AGAATCATAA ACCACAGAAA GCGCCTGATG GTTCGATCAT CCCTAATGAC 
TACTGTGACT TCTGTCTGGG AGACTCAGGC TCTAACAGGA AGACAGGCCA GGCCGAGGAG 
CTGGTTTCCT GTTCAGACTG CGGCCGCTCT GCTGATCGGG TCGGTGGGAC CAGGGCGAAG 
AGGAGGACGG CGGGAGTTCT GGACATGTTC GGAGACACGT CAGAAAGCGA GGCATCCACC 
TTTCACGGCT TTGAAGAGGA CGACCTGAAC GGGCTTCTGT CCGACGACAG CACAGGCTCA 
CCTGAGTACA GATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

dpf3 ( XM_009294764.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009293039.1 Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa43878
Clone ID Related Accession (Same CDS sequence)	XM_009294764.2 , XM_009294764.3
Accession Version	XM_009294764.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1077bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	zinc finger protein DPF3 isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007131.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009294764.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACAACAGAT ACAAACAAAA GCATAACTCA AAAACCGCTG ACTCAGTTTG TGGCAAGCGT 
TACAAAAACC GTCCTGGACT AAGCTACCAT TACGCCCATA CTCACCTTGC TGAAGAGGAA 
GGTGAGGAAG AACGGGAAAC CGAAATCCCT CAATCTCCTC CTGTCCATCA TGAGAATCAT 
AAACCACAGA AAGCGCCTGA TGGTTCGATC ATCCCTAATG ACTACTGTGA CTTCTGTCTG 
GGAGACTCAG GCTCTAACAG GAAGACAGGC CAGGCCGAGG AGCTGGTTTC CTGTTCAGAC 
TGCGGCCGCT CTGCTGATCG GGTCGGTGGG ACCAGGGCGA AGAGGAGGAC GGCGGGAGTT 
CTGGACATGT TCGGAGACAC GTCAGAAAGC GAGGCATCCA CCTTTCACGG CTTTGAAGAG 
GACGACCTGA ACGGGCTTCT GTCCGACGAC AGCACAGGCT CACCTGAGTA CAGATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009293039.1
CDS	76..1152
Translation	MATVIQNPLKALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPLDPQLRLCELRLEAELMAKREAPQTEATALEALLRGDGILDKRNNNAKEEETLLEIQRVLEADENGDGFHDDEDFEVDTPKRKHRNKGRGRGSGRRRTEAVANDDQDKPYVCDNRYKQKHNSKTADSVCGKRYKNRPGLSYHYAHTHLAEEEGEEERETEIPQSPPVHHENHKPQKAPDGSIIPNDYCDFCLGDSGSNRKTGQAEELVSCSDCGRSADRVGGTRAKRRTAGVLDMFGDTSESEASTFHGFEEDDLNGLLSDDSTGSPEYR

Target ORF information:

RefSeq Version	XM_009294764.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009294764.2

ORF Insert Sequence:

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACAACAGAT ACAAACAAAA GCATAACTCA AAAACCGCTG ACTCAGTTTG TGGCAAGCGT 
TACAAAAACC GTCCTGGACT AAGCTACCAT TACGCCCATA CTCACCTTGC TGAAGAGGAA 
GGTGAGGAAG AACGGGAAAC CGAAATCCCT CAATCTCCTC CTGTCCATCA TGAGAATCAT 
AAACCACAGA AAGCGCCTGA TGGTTCGATC ATCCCTAATG ACTACTGTGA CTTCTGTCTG 
GGAGACTCAG GCTCTAACAG GAAGACAGGC CAGGCCGAGG AGCTGGTTTC CTGTTCAGAC 
TGCGGCCGCT CTGCTGATCG GGTCGGTGGG ACCAGGGCGA AGAGGAGGAC GGCGGGAGTT 
CTGGACATGT TCGGAGACAC GTCAGAAAGC GAGGCATCCA CCTTTCACGG CTTTGAAGAG 
GACGACCTGA ACGGGCTTCT GTCCGACGAC AGCACAGGCT CACCTGAGTA CAGATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

dpf3 ( XM_009294764.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009293039.1 Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa43878
Clone ID Related Accession (Same CDS sequence)	XM_009294764.2 , XM_009294764.3
Accession Version	XM_009294764.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1077bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	zinc finger protein DPF3 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007131.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009294764.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACAACAGAT ACAAACAAAA GCATAACTCA AAAACCGCTG ACTCAGTTTG TGGCAAGCGT 
TACAAAAACC GTCCTGGACT AAGCTACCAT TACGCCCATA CTCACCTTGC TGAAGAGGAA 
GGTGAGGAAG AACGGGAAAC CGAAATCCCT CAATCTCCTC CTGTCCATCA TGAGAATCAT 
AAACCACAGA AAGCGCCTGA TGGTTCGATC ATCCCTAATG ACTACTGTGA CTTCTGTCTG 
GGAGACTCAG GCTCTAACAG GAAGACAGGC CAGGCCGAGG AGCTGGTTTC CTGTTCAGAC 
TGCGGCCGCT CTGCTGATCG GGTCGGTGGG ACCAGGGCGA AGAGGAGGAC GGCGGGAGTT 
CTGGACATGT TCGGAGACAC GTCAGAAAGC GAGGCATCCA CCTTTCACGG CTTTGAAGAG 
GACGACCTGA ACGGGCTTCT GTCCGACGAC AGCACAGGCT CACCTGAGTA CAGATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009293039.1
CDS	110..1186
Translation	MATVIQNPLKALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPLDPQLRLCELRLEAELMAKREAPQTEATALEALLRGDGILDKRNNNAKEEETLLEIQRVLEADENGDGFHDDEDFEVDTPKRKHRNKGRGRGSGRRRTEAVANDDQDKPYVCDNRYKQKHNSKTADSVCGKRYKNRPGLSYHYAHTHLAEEEGEEERETEIPQSPPVHHENHKPQKAPDGSIIPNDYCDFCLGDSGSNRKTGQAEELVSCSDCGRSADRVGGTRAKRRTAGVLDMFGDTSESEASTFHGFEEDDLNGLLSDDSTGSPEYR

Target ORF information:

RefSeq Version	XM_009294764.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009294764.3

ORF Insert Sequence:

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACAACAGAT ACAAACAAAA GCATAACTCA AAAACCGCTG ACTCAGTTTG TGGCAAGCGT 
TACAAAAACC GTCCTGGACT AAGCTACCAT TACGCCCATA CTCACCTTGC TGAAGAGGAA 
GGTGAGGAAG AACGGGAAAC CGAAATCCCT CAATCTCCTC CTGTCCATCA TGAGAATCAT 
AAACCACAGA AAGCGCCTGA TGGTTCGATC ATCCCTAATG ACTACTGTGA CTTCTGTCTG 
GGAGACTCAG GCTCTAACAG GAAGACAGGC CAGGCCGAGG AGCTGGTTTC CTGTTCAGAC 
TGCGGCCGCT CTGCTGATCG GGTCGGTGGG ACCAGGGCGA AGAGGAGGAC GGCGGGAGTT 
CTGGACATGT TCGGAGACAC GTCAGAAAGC GAGGCATCCA CCTTTCACGG CTTTGAAGAG 
GACGACCTGA ACGGGCTTCT GTCCGACGAC AGCACAGGCT CACCTGAGTA CAGATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

dpf3 ( XM_009294765.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009293040.1 Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X4, mRNA.

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CloneID	ODa43879
Clone ID Related Accession (Same CDS sequence)	XM_009294765.2
Accession Version	XM_009294765.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 612bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	zinc finger protein DPF3 isoform X4
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007131.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009294765.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACACCATAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009293040.1
CDS	76..687
Translation	MATVIQNPLKALGDQFYREAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKRHRGPGMAAGQMYTYPARCWRKKRRLHTPLDPQLRLCELRLEAELMAKREAPQTEATALEALLRGDGILDKRNNNAKEEETLLEIQRVLEADENGDGFHDDEDFEVDTPKRKHRNKGRGRGSGRRRTEAVANDDQDKPYVCDTI

Target ORF information:

RefSeq Version	XM_009294765.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio D4, zinc and double PHD fingers, family 3 (dpf3), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009294765.2

ORF Insert Sequence:

ATGGCGACTG TCATTCAGAA TCCGCTGAAA GCGCTCGGGG ACCAGTTCTA CAGGGAGGCC 
ATTGAGCACT GTCGCAGCTA CAATGCCCGC TTGTGTGCAG AGCGCAGCGT CCGCATGCCC 
TTTCTGGACT CTCAGACAGG CGTAGCGCAG AACAACTGTT ACATCTGGAT GGAGAAGCGA 
CACCGGGGGC CAGGGATGGC AGCAGGTCAG ATGTACACCT ACCCAGCGCG TTGTTGGAGG 
AAGAAGAGGC GACTTCACAC ACCTCTTGAC CCTCAGCTCC GTCTTTGTGA ACTCAGACTC 
GAGGCTGAGC TGATGGCCAA GAGAGAAGCC CCGCAGACAG AGGCCACGGC CCTTGAAGCA 
CTGCTACGAG GAGACGGGAT CTTGGACAAG AGGAACAATA ACGCTAAAGA GGAAGAGACA 
CTTCTGGAAA TTCAGCGGGT GTTGGAAGCA GACGAAAATG GGGACGGTTT TCATGATGAT 
GAGGATTTTG AAGTGGACAC ACCAAAGAGG AAGCATCGAA ACAAAGGCAG GGGTCGAGGC 
TCTGGGCGCA GGCGAACAGA AGCAGTGGCC AACGACGATC AGGATAAACC CTACGTGTGT 
GACACCATAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

DPFF-1 transcription factor deficiency causes the aberrant activation of MPK-1 and meiotic defects in the Caenorhabditis elegans germline.
Genesis (New York, N.Y. : 2000)55(11)(2017 Nov)
Villanueva-Chimal E,Salinas LS,Fern?ndez-Cardenas LP,Huelgas-Morales G,Cabrera-Wrooman A,Navarro RE

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Identification of vascular and hematopoietic genes downstream of etsrp by deep sequencing in zebrafish.
PloS one7(3)e31658(2012)
Gomez G,Lee JH,Veldman MB,Lu J,Xiao X,Lin S

Regulation of muscle development by DPF3, a novel histone acetylation and methylation reader of the BAF chromatin remodeling complex.
Genes & development22(17)2370-84(2008 Sep)
Lange M,Kaynak B,Forster UB,T?njes M,Fischer JJ,Grimm C,Schlesinger J,Just S,Dunkel I,Krueger T,Mebus S,Lehrach H,Lurz R,Gobom J,Rottbauer W,Abdelilah-Seyfried S,Sperling S

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dpf3 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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