nup107 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	nup107
Entrez Gene ID	562350
Full Name	nucleoporin 107
Synonyms	si:dkey-27k7.3,zgc:152723
General protein information	Preferred Names nucleoporin 107 Names nuclear pore complex protein Nup107
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001030167.1	NP_001025338.1	nuclear pore complex protein Nup107

Pathways from BioSystems

Homologies

Homo sapiens (human)	NUP107	NP_065134.1
Pan troglodytes (chimpanzee)	NUP107	XP_001153762.1
Mus musculus (house mouse)	Nup107	NP_598771.1
Canis lupus familiaris (dog)	NUP107	XP_531670.3
Drosophila melanogaster (fruit fly)	Nup107	NP_609446.1
	NUP107	XP_001117201.1
Danio rerio (zebrafish)	nup107	NP_001025338.1
Bos taurus (cattle)	NUP107	XP_002687439.1
Gallus gallus (chicken)	NUP107	XP_004937621.1
Rattus norvegicus (Norway rat)	Nup107	NP_446282.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001685	XP_001238474.3
Xenopus tropicalis (tropical clawed frog)	nup107	XP_004912994.1

Gene Ontology
Bibliography

Related articles in PubMed

Molecular Evolution of MDM1, a "Duplication-Resistant" Gene in Vertebrates.
Hensley MR, Chua RF, Leung YF, Yang JY, Zhang G
PloS one11(9)e0163229(2016)

Biallelic Mutations in Nuclear Pore Complex Subunit NUP107 Cause Early-Childhood-Onset Steroid-Resistant Nephrotic Syndrome.
Miyake N, Tsukaguchi H, Koshimizu E, Shono A, Matsunaga S, Shiina M, Mimura Y, Imamura S, Hirose T, Okudela K, Nozu K, Akioka Y, Hattori M, Yoshikawa N, Kitamura A, Cheong HI, Kagami S, Yamashita M, Fujita A, Miyatake S, Tsurusaki Y, Nakashima M, Saitsu H, Ohashi K, Imamoto N, Ryo A, Ogata K, Iijima K, Matsumoto N
American journal of human genetics97(4)555-66(2015 Oct)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Data indicate that zygotic nup107 mutant embryos show tissue-specific defects with impaired nuclear export of mRNAs.
Title: Loss of zygotic NUP107 protein causes missing of pharyngeal skeleton and other tissue defects with impaired nuclear pore function in zebrafish embryos.

The following nup107 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the nup107 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa34831	NM_001030167.1 Latest version!	Danio rerio nucleoporin 107 (nup107), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

nup107 ( NM_001030167.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001025338.1 Danio rerio nucleoporin 107 (nup107), mRNA.

Price & Availability↑

CloneID	ODa34831
Clone ID Related Accession (Same CDS sequence)	NM_001030167.1
Accession Version	NM_001030167.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2760bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-14
Organism	Danio rerio(zebrafish)
Product	nuclear pore complex protein Nup107
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX897665.7. On Aug 6, 2005 this sequence version replaced XM_685742.1. ##Evidence-Data-START## Transcript exon combination :: GDQH01009359.1, BC125812.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGAATGGA GTCAGACTTG GTTGAGTCCA GTGGTTCGGG ACGCTGAGGT GACCCGTGCG 
GCCCGCAGAA AGAGTTCTCA CAAAAAAGTT GCTTTCCCGT TGGCACAGGA TGACTCTCCT 
GGCACCAGCA CGACCCCTGC TCGACCTCTC CTGCGCCAAA CACCTGGACC TCGCCTTAAA 
CAGACATTCA CCCCAAGAAG TGCCCTTAGG AATCCCGATG TGTCTGCCAT CCTCGGGACC 
TCAGGAAGCA GAACCCCTCG CTTCGTAAAC ACACCTCGTA CCAAAGGCGG CCTGAGCATG 
AACTTGGATG ACAGTGACTG GACGAACAGT CTTTACCCAT CTCCTCTATC AGGAATAGTG 
GACACAAGCT TTACTGACGA CGTTAGCATG AGTGCTCTGA TGCTGAAGGA AGATGATCCT 
GGAGAGGCTG CTTCTCTTGG TTTGTTTCCT GAATTCCTGG AGTCTTATTT GCGTCATGCG 
TCCACAGCCG TGTTTGACCT GTTGGAGGAA TATGAAGCTC TCTGTCAAGA TAAGGTCAGT 
GTGTTGCAGA AACTGGTTCT CCGTTCAGCC CCTGGCCAGC AGAAATCCTC CAAGACTGTC 
AGCATCACCT GGTTATTGCA GCAAGAGATG GTGACCTGGA GACTTATCAC CTCTCTGTAC 
AGAGACAGAG TTCAGACTGT TTTAGAAGAA GACATCATGA TGGATATTAC TATGCCCAGT 
GAGAGTGAGA AAGCAGTAAT GGAGCAGTTC TTCCAAAAGG ACAGTATGGT GCGACAGAGC 
CAGCTGGTGG TGGATTGGTT GGAGAGTATA GCAAAAGACG ATATAGGAGA CTTCTCGGAT 
AACATTGAAT ACTATGCTAA ATCTGTGTAC TGGGAGAACA CACTCCACAC GCTGAAGCTG 
AGGAGGAATC AGTCCAGTGG TGGTTTAAGC AGGCCACTGG TCACTGAACT GGATCCCGAT 
GCTCCCATCA GACAGAAAAG ACCCCTGGCA GACCTGGACA GAGAGGACGA CTCTCGCCTC 
CTCAAAAACC TCTTCAATCT CATACGAGCT GGCATGACTG ATGAGGCTCA GAGGTTGTGT 
AAGCGCTGTG GTCAGGCCTG GCGTGCTGCC ACTTTGGAAG GCTGGAAACT CTACCATGAC 
CCCAACATCA ATGGAGGGGG TGGTGAGCTT CAGCCTGTGG AGGGAAATCC TCATCGCAGC 
GTCTGGAAGG TTTGCTGCTG GAGAATGGCA GAAGAGGAGC AGTTCAACAA ATATGAAAGG 
GCTATCTATG CTGCGTTGAG CGGAAACCTC AAACAGCTGT TGCCGGTGTG TGAGTCCTGG 
GAAGACACAG TATGGGCTTA TTTCCGGGTG ATGGTGGACA CTCTGGTCGA GCAGGAGATC 
TGTTCTTCTG GTCTGGGCAG TGAAGAGCTG GAGGAGCTGC CCAGAGACTT CCTGGAGACC 
AATTGGACGC TGGAGAAAGT CTTTGAAGAG ATTCAAGCAA CAGAGTCCAA GAGAGTTCTG 
GACGCAACCA AGGAGCACTA CCATGTGATT CAGAAGTTTG TGATTCTTGG AGATCTTGAT 
GGTCTTCTTG AGGAGTTCAG TGATTGGTTG GGAAGAAATA CACCTTTGCC AGCCCATCTC 
TTACGCTTCA TGTCACATTT AGTGTTGTTT TATCGCAGTT TGGGCATGCA GCTTAAGGAG 
GAGGTGTGTG TAGATGTCCT GAAGGCCTAC ATCTCGCTGT TGGTGAAGGA AAAGCAGGTG 
GAGCTCATTG CGTTTTACGT CAGTCACCTT CCTGCAGATT TGGCTGTGTC ACAATATGCT 
CAGTTCCTGG AGGAAGTCAC TGAGACTGAG CAGCGCAAAC ACTGTCTGGA GCTCGCAACA 
CAAGCAGGTT TGGAAGTGGC AGCAATCACA AAAACGGTAG TGGAAACCAT CAGAGAGAGA 
GACACAGATG AATTTTCCCA CCATGACCTG ACGCCTGCAC TGGACACGGC AACTACAGTG 
GAGGATCAGC AGAAGATTGA TGTGATTGAC TGGTTGGTGT TTGATCCTGC TCAACGAGCT 
GAAGCACTTA AACAGAGCAA CGCCATCATG AGGAAGTTCT TAGCATCTAA GAAGCATGAC 
GCTGCTAAGA TGGTCTTCGC CAAAGTGCCC GAAGACTCCA TGCGTGAGAT CTACCGGCAG 
TGGGAGGAGC AGGGTATGGA CACACCACTT CCTGCAGAAG AGGAGAATGC CATTCGTGAA 
CATCTATGCA TTCGTGCTTA TCTGGAAGCA CACGAAGCGT TTAACGAGTG GTTCAAGCAC 
ATGAACTGTC CTCCGGTGAA GCCCACAGCT CCTGCTCAAG CCAAGTTTAC AGAGAAAGTG 
GCTCATGAGA TGAAAGAGGC TGAGTACAAG ATAGAGCTGG AGAACTGGCA GGGGCGTCTA 
GGAGCTCTCA CTGAAGATGT GAAGGAGAGG ATCTATAATG TGCTGCTGTT TGTAGACGGA 
GGCTGGATGG TGGATGTCAG AGAGGATGCT GAGGAAGACT CCGAGCGTTC TCATCAGATG 
ACTCTGCTGC GGCGTTTGTG TTTGCCCATG ATGTCTTTTC TTCTGTTAAC TGTACTGCAG 
CGAACTGAAC GCCACCAGGA GAGTCTGCGT CTTGCTGACA TCATCGCATC TGACCAACAC 
AAGCTATATG AGGTTTTCTC TAAAGATGAG CTGCAGAAGT TTCTCCAAAA GATGAGGGAA 
TCCTCTCTTC TTCTTCTGGA TAAAGGACTG GATCCTCTGG GATATGAGAT TCAGCCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001025338.1
CDS	89..2848
Translation	MEWSQTWLSPVVRDAEVTRAARRKSSHKKVAFPLAQDDSPGTSTTPARPLLRQTPGPRLKQTFTPRSALRNPDVSAILGTSGSRTPRFVNTPRTKGGLSMNLDDSDWTNSLYPSPLSGIVDTSFTDDVSMSALMLKEDDPGEAASLGLFPEFLESYLRHASTAVFDLLEEYEALCQDKVSVLQKLVLRSAPGQQKSSKTVSITWLLQQEMVTWRLITSLYRDRVQTVLEEDIMMDITMPSESEKAVMEQFFQKDSMVRQSQLVVDWLESIAKDDIGDFSDNIEYYAKSVYWENTLHTLKLRRNQSSGGLSRPLVTELDPDAPIRQKRPLADLDREDDSRLLKNLFNLIRAGMTDEAQRLCKRCGQAWRAATLEGWKLYHDPNINGGGGELQPVEGNPHRSVWKVCCWRMAEEEQFNKYERAIYAALSGNLKQLLPVCESWEDTVWAYFRVMVDTLVEQEICSSGLGSEELEELPRDFLETNWTLEKVFEEIQATESKRVLDATKEHYHVIQKFVILGDLDGLLEEFSDWLGRNTPLPAHLLRFMSHLVLFYRSLGMQLKEEVCVDVLKAYISLLVKEKQVELIAFYVSHLPADLAVSQYAQFLEEVTETEQRKHCLELATQAGLEVAAITKTVVETIRERDTDEFSHHDLTPALDTATTVEDQQKIDVIDWLVFDPAQRAEALKQSNAIMRKFLASKKHDAAKMVFAKVPEDSMREIYRQWEEQGMDTPLPAEEENAIREHLCIRAYLEAHEAFNEWFKHMNCPPVKPTAPAQAKFTEKVAHEMKEAEYKIELENWQGRLGALTEDVKERIYNVLLFVDGGWMVDVREDAEEDSERSHQMTLLRRLCLPMMSFLLLTVLQRTERHQESLRLADIIASDQHKLYEVFSKDELQKFLQKMRESSLLLLDKGLDPLGYEIQP

Target ORF information:

RefSeq Version	NM_001030167.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio nucleoporin 107 (nup107), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001030167.1

ORF Insert Sequence:

ATGGAATGGA GTCAGACTTG GTTGAGTCCA GTGGTTCGGG ACGCTGAGGT GACCCGTGCG 
GCCCGCAGAA AGAGTTCTCA CAAAAAAGTT GCTTTCCCGT TGGCACAGGA TGACTCTCCT 
GGCACCAGCA CGACCCCTGC TCGACCTCTC CTGCGCCAAA CACCTGGACC TCGCCTTAAA 
CAGACATTCA CCCCAAGAAG TGCCCTTAGG AATCCCGATG TGTCTGCCAT CCTCGGGACC 
TCAGGAAGCA GAACCCCTCG CTTCGTAAAC ACACCTCGTA CCAAAGGCGG CCTGAGCATG 
AACTTGGATG ACAGTGACTG GACGAACAGT CTTTACCCAT CTCCTCTATC AGGAATAGTG 
GACACAAGCT TTACTGACGA CGTTAGCATG AGTGCTCTGA TGCTGAAGGA AGATGATCCT 
GGAGAGGCTG CTTCTCTTGG TTTGTTTCCT GAATTCCTGG AGTCTTATTT GCGTCATGCG 
TCCACAGCCG TGTTTGACCT GTTGGAGGAA TATGAAGCTC TCTGTCAAGA TAAGGTCAGT 
GTGTTGCAGA AACTGGTTCT CCGTTCAGCC CCTGGCCAGC AGAAATCCTC CAAGACTGTC 
AGCATCACCT GGTTATTGCA GCAAGAGATG GTGACCTGGA GACTTATCAC CTCTCTGTAC 
AGAGACAGAG TTCAGACTGT TTTAGAAGAA GACATCATGA TGGATATTAC TATGCCCAGT 
GAGAGTGAGA AAGCAGTAAT GGAGCAGTTC TTCCAAAAGG ACAGTATGGT GCGACAGAGC 
CAGCTGGTGG TGGATTGGTT GGAGAGTATA GCAAAAGACG ATATAGGAGA CTTCTCGGAT 
AACATTGAAT ACTATGCTAA ATCTGTGTAC TGGGAGAACA CACTCCACAC GCTGAAGCTG 
AGGAGGAATC AGTCCAGTGG TGGTTTAAGC AGGCCACTGG TCACTGAACT GGATCCCGAT 
GCTCCCATCA GACAGAAAAG ACCCCTGGCA GACCTGGACA GAGAGGACGA CTCTCGCCTC 
CTCAAAAACC TCTTCAATCT CATACGAGCT GGCATGACTG ATGAGGCTCA GAGGTTGTGT 
AAGCGCTGTG GTCAGGCCTG GCGTGCTGCC ACTTTGGAAG GCTGGAAACT CTACCATGAC 
CCCAACATCA ATGGAGGGGG TGGTGAGCTT CAGCCTGTGG AGGGAAATCC TCATCGCAGC 
GTCTGGAAGG TTTGCTGCTG GAGAATGGCA GAAGAGGAGC AGTTCAACAA ATATGAAAGG 
GCTATCTATG CTGCGTTGAG CGGAAACCTC AAACAGCTGT TGCCGGTGTG TGAGTCCTGG 
GAAGACACAG TATGGGCTTA TTTCCGGGTG ATGGTGGACA CTCTGGTCGA GCAGGAGATC 
TGTTCTTCTG GTCTGGGCAG TGAAGAGCTG GAGGAGCTGC CCAGAGACTT CCTGGAGACC 
AATTGGACGC TGGAGAAAGT CTTTGAAGAG ATTCAAGCAA CAGAGTCCAA GAGAGTTCTG 
GACGCAACCA AGGAGCACTA CCATGTGATT CAGAAGTTTG TGATTCTTGG AGATCTTGAT 
GGTCTTCTTG AGGAGTTCAG TGATTGGTTG GGAAGAAATA CACCTTTGCC AGCCCATCTC 
TTACGCTTCA TGTCACATTT AGTGTTGTTT TATCGCAGTT TGGGCATGCA GCTTAAGGAG 
GAGGTGTGTG TAGATGTCCT GAAGGCCTAC ATCTCGCTGT TGGTGAAGGA AAAGCAGGTG 
GAGCTCATTG CGTTTTACGT CAGTCACCTT CCTGCAGATT TGGCTGTGTC ACAATATGCT 
CAGTTCCTGG AGGAAGTCAC TGAGACTGAG CAGCGCAAAC ACTGTCTGGA GCTCGCAACA 
CAAGCAGGTT TGGAAGTGGC AGCAATCACA AAAACGGTAG TGGAAACCAT CAGAGAGAGA 
GACACAGATG AATTTTCCCA CCATGACCTG ACGCCTGCAC TGGACACGGC AACTACAGTG 
GAGGATCAGC AGAAGATTGA TGTGATTGAC TGGTTGGTGT TTGATCCTGC TCAACGAGCT 
GAAGCACTTA AACAGAGCAA CGCCATCATG AGGAAGTTCT TAGCATCTAA GAAGCATGAC 
GCTGCTAAGA TGGTCTTCGC CAAAGTGCCC GAAGACTCCA TGCGTGAGAT CTACCGGCAG 
TGGGAGGAGC AGGGTATGGA CACACCACTT CCTGCAGAAG AGGAGAATGC CATTCGTGAA 
CATCTATGCA TTCGTGCTTA TCTGGAAGCA CACGAAGCGT TTAACGAGTG GTTCAAGCAC 
ATGAACTGTC CTCCGGTGAA GCCCACAGCT CCTGCTCAAG CCAAGTTTAC AGAGAAAGTG 
GCTCATGAGA TGAAAGAGGC TGAGTACAAG ATAGAGCTGG AGAACTGGCA GGGGCGTCTA 
GGAGCTCTCA CTGAAGATGT GAAGGAGAGG ATCTATAATG TGCTGCTGTT TGTAGACGGA 
GGCTGGATGG TGGATGTCAG AGAGGATGCT GAGGAAGACT CCGAGCGTTC TCATCAGATG 
ACTCTGCTGC GGCGTTTGTG TTTGCCCATG ATGTCTTTTC TTCTGTTAAC TGTACTGCAG 
CGAACTGAAC GCCACCAGGA GAGTCTGCGT CTTGCTGACA TCATCGCATC TGACCAACAC 
AAGCTATATG AGGTTTTCTC TAAAGATGAG CTGCAGAAGT TTCTCCAAAA GATGAGGGAA 
TCCTCTCTTC TTCTTCTGGA TAAAGGACTG GATCCTCTGG GATATGAGAT TCAGCCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Molecular Evolution of MDM1, a "Duplication-Resistant" Gene in Vertebrates.
PloS one11(9)e0163229(2016)
Hensley MR,Chua RF,Leung YF,Yang JY,Zhang G

Biallelic Mutations in Nuclear Pore Complex Subunit NUP107 Cause Early-Childhood-Onset Steroid-Resistant Nephrotic Syndrome.
American journal of human genetics97(4)555-66(2015 Oct)
Miyake N,Tsukaguchi H,Koshimizu E,Shono A,Matsunaga S,Shiina M,Mimura Y,Imamura S,Hirose T,Okudela K,Nozu K,Akioka Y,Hattori M,Yoshikawa N,Kitamura A,Cheong HI,Kagami S,Yamashita M,Fujita A,Miyatake S,Tsurusaki Y,Nakashima M,Saitsu H,Ohashi K,Imamoto N,Ryo A,Ogata K,Iijima K,Matsumoto N

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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nup107 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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