TMIGD1 cDNA ORF clone, Danio rerio(Zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	TMIGD1
Entrez Gene ID	559127
Full Name	transmembrane and immunoglobulin domain containing 1
Synonyms	sc:d157,sc:d810
General protein information	Preferred Names transmembrane and immunoglobulin domain containing 1 Names transmembrane and immunoglobulin domain-containing protein 1
Gene Type	protein-coding
Organism	Danio rerio(Zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001098248.1	NP_001091718.1	transmembrane and immunoglobulin domain-containing protein 1 precursor
XM_017352798.1	XP_017208287.1	transmembrane and immunoglobulin domain-containing protein 1 isoform X1

Pathways from BioSystems

Homologies

Homo sapiens (human)	TMIGD1	NP_996663.1
	TMIGD1	XP_001111785.1
Mus musculus (house mouse)	Tmigd1	NP_079931.1
Pan troglodytes (chimpanzee)	TMIGD1	XP_001134969.1
Gallus gallus (chicken)	TMIGD1	XP_004946699.1
Danio rerio (zebrafish)	tmigd1	NP_001091718.1
Xenopus tropicalis (tropical clawed frog)	tmigd1	NP_001106530.1
Canis lupus familiaris (dog)	TMIGD1	XP_853824.2
Bos taurus (cattle)	TMIGD1	NP_001030208.1
Rattus norvegicus (Norway rat)	Tmigd1	NP_001128501.1

Gene Ontology
Bibliography

Related articles in PubMed

The first characterization of multidrug and toxin extrusion (MATE/SLC47) proteins in zebrafish (Danio rerio).
Lon?ar J, Popovi? M, Krznar P, Zaja R, Smital T
Scientific reports628937(2016 Jun)

Evolution of the tbx6/16 subfamily genes in vertebrates: insights from zebrafish.
Ahn D, You KH, Kim CH
Molecular biology and evolution29(12)3959-83(2012 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following TMIGD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TMIGD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa35421	NM_001098248.1 Latest version!	Danio rerio transmembrane and immunoglobulin domain containing 1 (tmigd1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
ODa56794	XM_017352798.1 Latest version!	Danio rerio transmembrane and immunoglobulin domain containing 1 (tmigd1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

TMIGD1 ( NM_001098248.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> NP_001091718.1 Danio rerio transmembrane and immunoglobulin domain containing 1 (tmigd1), mRNA.

Price & Availability↑

CloneID	ODa35421
Clone ID Related Accession (Same CDS sequence)	NM_001098248.1
Accession Version	NM_001098248.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-02
Organism	Danio rerio(zebrafish)
Product	transmembrane and immunoglobulin domain-containing protein 1 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CU458924.1. On May 25, 2007 this sequence version replaced XM_682442.2. ##Evidence-Data-START## Transcript exon combination :: CU458924.1, DN832747.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA3505371, SAMEA3505373 [ECO:0000350] ##Evidence-Data-END##

ATGAAGCTGA AGATACTGGT TAGAGTCGCT CTGCTCCTGC TGTGCTGTGT CAGTTGTGTA 
AAAGCGGTCA CCGTGGAGTC CTGTCCGCTG GCCGTCGGGA GTTTGCTCCA GACAGCGGTT 
GAGGAAACCG TCACTCTCAC TTGTATGACT GATAATACTG ACCCATCAAG CCAACAAGAG 
CTGCAGTGGT TCCGCAACGG TGCCCGTGTG AAACTGCCAG AAGAAAACAT GATGTCCCGG 
AGCAGTCTTT GTGTCCAGCC TGTCACTAAA GAAGACGACG GAGCCGTCTT TACCTGTCAG 
CTGAAGGGCG ATGCCAGCGT CAACAGCACA GTCGAGTTTG ACGTCAGTTA TCCCCCAGAC 
CTTAATGACA CTATAGAAGT GTTTGTTCAG GAAACAAATG ACGCTGTTCT GTCCTGTGAA 
GTACGTGCCA ACCCTCCAGT AACTGTGGTT TGGAAAAAGG ATGGCGAGGT TCTAGATCTG 
ACCACCGGTA GTTACAAATC AACCAATAAT GGCATCACCG CTCAGTTGAC AATCCCAAAA 
CTTAAGCGTG ATGTACATCA GGGGTTGTAC GTCTGTGAGA CAAAATCAGC TATGTATGGA 
GTTACTGGCA GAACCTTTCA AGTTACGGTT GAAGATAGAG TGATTGGGTT CCCTCTGGGA 
CCCACAATTG CTGGAGTAGT GGTGGTTGCA TGCACAATTG TATTAGCGCT CATCTCTAGA 
AGAAATAAAA TTATGAAGTG CTTAAAACGA AATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001091718.1
CDS	86..841
Translation	MKLKILVRVALLLLCCVSCVKAVTVESCPLAVGSLLQTAVEETVTLTCMTDNTDPSSQQELQWFRNGARVKLPEENMMSRSSLCVQPVTKEDDGAVFTCQLKGDASVNSTVEFDVSYPPDLNDTIEVFVQETNDAVLSCEVRANPPVTVVWKKDGEVLDLTTGSYKSTNNGITAQLTIPKLKRDVHQGLYVCETKSAMYGVTGRTFQVTVEDRVIGFPLGPTIAGVVVVACTIVLALISRRNKIMKCLKRN

Target ORF information:

RefSeq Version	NM_001098248.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio transmembrane and immunoglobulin domain containing 1 (tmigd1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001098248.1

ORF Insert Sequence:

ATGAAGCTGA AGATACTGGT TAGAGTCGCT CTGCTCCTGC TGTGCTGTGT CAGTTGTGTA 
AAAGCGGTCA CCGTGGAGTC CTGTCCGCTG GCCGTCGGGA GTTTGCTCCA GACAGCGGTT 
GAGGAAACCG TCACTCTCAC TTGTATGACT GATAATACTG ACCCATCAAG CCAACAAGAG 
CTGCAGTGGT TCCGCAACGG TGCCCGTGTG AAACTGCCAG AAGAAAACAT GATGTCCCGG 
AGCAGTCTTT GTGTCCAGCC TGTCACTAAA GAAGACGACG GAGCCGTCTT TACCTGTCAG 
CTGAAGGGCG ATGCCAGCGT CAACAGCACA GTCGAGTTTG ACGTCAGTTA TCCCCCAGAC 
CTTAATGACA CTATAGAAGT GTTTGTTCAG GAAACAAATG ACGCTGTTCT GTCCTGTGAA 
GTACGTGCCA ACCCTCCAGT AACTGTGGTT TGGAAAAAGG ATGGCGAGGT TCTAGATCTG 
ACCACCGGTA GTTACAAATC AACCAATAAT GGCATCACCG CTCAGTTGAC AATCCCAAAA 
CTTAAGCGTG ATGTACATCA GGGGTTGTAC GTCTGTGAGA CAAAATCAGC TATGTATGGA 
GTTACTGGCA GAACCTTTCA AGTTACGGTT GAAGATAGAG TGATTGGGTT CCCTCTGGGA 
CCCACAATTG CTGGAGTAGT GGTGGTTGCA TGCACAATTG TATTAGCGCT CATCTCTAGA 
AGAAATAAAA TTATGAAGTG CTTAAAACGA AATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

TMIGD1 ( XM_017352798.1 ) cDNA ORF clone, Danio rerio(Zebrafish) -> XP_017208287.1 Danio rerio transmembrane and immunoglobulin domain containing 1 (tmigd1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa56794
Clone ID Related Accession (Same CDS sequence)	XM_017352798.1
Accession Version	XM_017352798.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	transmembrane and immunoglobulin domain-containing protein 1 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGGTAC TGGTTAGAGT CGCTCTGCTC CTGCTGTGCT GTGTCAGTTG TGTAAAAGCG 
GTCACCGTGG AGTCCTGTCC GCTGGCCGTC GGGAGTTTGC TCCAGACAGC GGTTGAGGAA 
ACCGTCACTC TCACTTGTAT GACTGATAAT ACTGACCCAT CAAGCCAACA AGAGCTGCAG 
TGGTTCCGCA ACGGTGCCCG TGTGAAACTG CCAGAAGAAA ACATGATGTC CCGGAGCAGT 
CTTTGTGTCC AGCCTGTCAC TAAAGAAGAC GACGGAGCCG TCTTTACCTG TCAGCTGAAG 
GGCGATGCCA GCGTCAACAG CACAGTCGAG TTTGACGTCC TTTATCCCCC AGACCTTAAT 
GACACTACAG AAGTGTTTGT TCAGGAAACA AATGACGCTG TTCTGTCCTG TGAAGTACGT 
GCCAACCCTC CAGTAACTGT GGTTTGGAAA AAGGATGGCG AGGTTCTAGA TCTGACCACC 
GGTAGTTACA AATCAACCAA TAACGGCATC ACCGCTCAGT TGACAATCCC AAAACTTAAG 
CGTGATGTAC ATCAGGGGTT GTACGTCTGT GAGACAAAAT CAGCTATGTA TGGAGTTACT 
GGCAGAACTT TTCAAGTTAC GGTTGAAGAT AGAGTGATTG GGTTCCCTCT GGGACCCACA 
ATTGCTGGAG TAGTGGTGGT TGCATGCACA ATTGTATTAG CGCTCATCTC TAGAAGAAAT 
AAAATTATGA AGGTAAGCCA ACTTCATTCG GGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017208287.1
CDS	224..979
Translation	MKVLVRVALLLLCCVSCVKAVTVESCPLAVGSLLQTAVEETVTLTCMTDNTDPSSQQELQWFRNGARVKLPEENMMSRSSLCVQPVTKEDDGAVFTCQLKGDASVNSTVEFDVLYPPDLNDTTEVFVQETNDAVLSCEVRANPPVTVVWKKDGEVLDLTTGSYKSTNNGITAQLTIPKLKRDVHQGLYVCETKSAMYGVTGRTFQVTVEDRVIGFPLGPTIAGVVVVACTIVLALISRRNKIMKVSQLHSG

Target ORF information:

RefSeq Version	XM_017352798.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio transmembrane and immunoglobulin domain containing 1 (tmigd1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017352798.1

ORF Insert Sequence:

ATGAAGGTAC TGGTTAGAGT CGCTCTGCTC CTGCTGTGCT GTGTCAGTTG TGTAAAAGCG 
GTCACCGTGG AGTCCTGTCC GCTGGCCGTC GGGAGTTTGC TCCAGACAGC GGTTGAGGAA 
ACCGTCACTC TCACTTGTAT GACTGATAAT ACTGACCCAT CAAGCCAACA AGAGCTGCAG 
TGGTTCCGCA ACGGTGCCCG TGTGAAACTG CCAGAAGAAA ACATGATGTC CCGGAGCAGT 
CTTTGTGTCC AGCCTGTCAC TAAAGAAGAC GACGGAGCCG TCTTTACCTG TCAGCTGAAG 
GGCGATGCCA GCGTCAACAG CACAGTCGAG TTTGACGTCC TTTATCCCCC AGACCTTAAT 
GACACTACAG AAGTGTTTGT TCAGGAAACA AATGACGCTG TTCTGTCCTG TGAAGTACGT 
GCCAACCCTC CAGTAACTGT GGTTTGGAAA AAGGATGGCG AGGTTCTAGA TCTGACCACC 
GGTAGTTACA AATCAACCAA TAACGGCATC ACCGCTCAGT TGACAATCCC AAAACTTAAG 
CGTGATGTAC ATCAGGGGTT GTACGTCTGT GAGACAAAAT CAGCTATGTA TGGAGTTACT 
GGCAGAACTT TTCAAGTTAC GGTTGAAGAT AGAGTGATTG GGTTCCCTCT GGGACCCACA 
ATTGCTGGAG TAGTGGTGGT TGCATGCACA ATTGTATTAG CGCTCATCTC TAGAAGAAAT 
AAAATTATGA AGGTAAGCCA ACTTCATTCG GGATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The first characterization of multidrug and toxin extrusion (MATE/SLC47) proteins in zebrafish (Danio rerio).
Scientific reports628937(2016 Jun)
Lon?ar J,Popovi? M,Krznar P,Zaja R,Smital T

Evolution of the tbx6/16 subfamily genes in vertebrates: insights from zebrafish.
Molecular biology and evolution29(12)3959-83(2012 Dec)
Ahn D,You KH,Kim CH