ORF » Species Summary » Danio rerio » cmss1 cDNA ORF clone

cmss1 cDNA ORF clone, Danio rerio(zebrafish)

The following cmss1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cmss1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa37418 NM_001006048.1
Latest version!		 Danio rerio cms1 ribosomal small subunit homolog (yeast) (cmss1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa141182 NM_001006048.2
Latest version!		 Danio rerio cms1 ribosomal small subunit homolog (cmss1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $174.30
$249.00
ODa15238 XM_021478644.1
Latest version!		 Danio rerio cms1 ribosomal small subunit homolog (yeast) (cmss1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $174.30
$249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    cmss1 ( NM_001006048.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001006048.1 Danio rerio cms1 ribosomal small subunit homolog (yeast) (cmss1), mRNA.
    Price & Availability↑
    CloneID ODa37418
    Clone ID Related Accession (Same CDS sequence) NM_001006048.1
    Accession Version NM_001006048.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 876bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-04-15
    Organism Danio rerio(Zebrafish)
    Product protein CMSS1
    Comment PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC083291.1. ##Evidence-Data-START## Transcript exon combination :: BC083291.1, EH549997.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTGATG ATTTAGGAGA CGAGTGGTGG ACCCAGGGCG ATAATTCAGA TGTGCCTGAG 
    GTAGAGGAGG AAACAGAGCA TGCAGAAGAA AAACAACCGA TTAAATCTAC ACCAAAGAAA 
    AGGAAGGTTG AAAAACAGAT TCCAGATGCC ACAAAGAAAA AGAAGGCAAC AGTTAAGAAA 
    GAATGTTTCA TCACGCAAGA GAGATCAGAG GAAAAGCCTG ATAACGAGTC TAACAAAAAC 
    AAGAAAAGAA GAAAGAAGAA GAAAACTATC ACAGATGTCC TGACAAGCTC TAAGCCTGTG 
    CCCGGCTCTC CAGTTGACCT TGTGAGCCTT CTGAAGACTT ACCACAGCCA GACCCGCTCT 
    GTTATTGAGC AGGAGGAACT GACGTTACAA GATTCTTGTT TCCTCAGCTG TAATGACCTC 
    ACACACAGCT TGTCTTCCTA CCTCAAAGAA GTTTGTCCAA AGTGGGCTAA AATGCAGAAA 
    CAGCACACCC AGACCAGCTC AGTGGTTTTG CTAATTGTTT GTGGATCTGC TTTAAGAACC 
    ATTGATCTCA TTAAGCAGCT GGTGACATTC AAAGGACAAG CTAAAGTGCT GAAGCTGTTT 
    GCAAAACACA TCAAAGTGGA AGAACAGATA AAGTCATTGA GTAAAGGTGT GACCCATATT 
    GCTGTTGGAA CTCCTGGGAG AATTTGCGCG CTGTTAGAGA AAGAGGGATT GACTGTGCAA 
    GGACTACGTT ATCTGGTGCT GGACTGGAAC TACAGAGACC AGAAGCAAAG GAGGATGGTG 
    GATGTACCAG AGGTGAAAGG AGACTTACTA AAAATGATGG ACCAAGGTCT AATCCAGAGC 
    TGCAGAGAAG GAACGGTTAA AATAGGACTC TTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001006048.1
    CDS25..900
    Translation

    Target ORF information:

    RefSeq Version NM_001006048.1
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio cms1 ribosomal small subunit homolog (yeast) (cmss1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001006048.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTGATG ATTTAGGAGA CGAGTGGTGG ACCCAGGGCG ATAATTCAGA TGTGCCTGAG 
    GTAGAGGAGG AAACAGAGCA TGCAGAAGAA AAACAACCGA TTAAATCTAC ACCAAAGAAA 
    AGGAAGGTTG AAAAACAGAT TCCAGATGCC ACAAAGAAAA AGAAGGCAAC AGTTAAGAAA 
    GAATGTTTCA TCACGCAAGA GAGATCAGAG GAAAAGCCTG ATAACGAGTC TAACAAAAAC 
    AAGAAAAGAA GAAAGAAGAA GAAAACTATC ACAGATGTCC TGACAAGCTC TAAGCCTGTG 
    CCCGGCTCTC CAGTTGACCT TGTGAGCCTT CTGAAGACTT ACCACAGCCA GACCCGCTCT 
    GTTATTGAGC AGGAGGAACT GACGTTACAA GATTCTTGTT TCCTCAGCTG TAATGACCTC 
    ACACACAGCT TGTCTTCCTA CCTCAAAGAA GTTTGTCCAA AGTGGGCTAA AATGCAGAAA 
    CAGCACACCC AGACCAGCTC AGTGGTTTTG CTAATTGTTT GTGGATCTGC TTTAAGAACC 
    ATTGATCTCA TTAAGCAGCT GGTGACATTC AAAGGACAAG CTAAAGTGCT GAAGCTGTTT 
    GCAAAACACA TCAAAGTGGA AGAACAGATA AAGTCATTGA GTAAAGGTGT GACCCATATT 
    GCTGTTGGAA CTCCTGGGAG AATTTGCGCG CTGTTAGAGA AAGAGGGATT GACTGTGCAA 
    GGACTACGTT ATCTGGTGCT GGACTGGAAC TACAGAGACC AGAAGCAAAG GAGGATGGTG 
    GATGTACCAG AGGTGAAAGG AGACTTACTA AAAATGATGG ACCAAGGTCT AATCCAGAGC 
    TGCAGAGAAG GAACGGTTAA AATAGGACTC TTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    cmss1 ( NM_001006048.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001006048.2 Danio rerio cms1 ribosomal small subunit homolog (cmss1), mRNA.
    Price & Availability↑
    CloneID ODa141182
    Clone ID Related Accession (Same CDS sequence) NM_001006048.2
    Accession Version NM_001006048.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 879bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-23
    Organism Danio rerio(zebrafish)
    Product protein CMSS1
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH536714.1, EH549997.1, EH520183.1 and BX322575.19. On Aug 19, 2017 this sequence version replaced NM_001006048.1. ##Evidence-Data-START## Transcript exon combination :: BC083291.1, EH549997.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTGATG ATTTAGGAGA CGAGTGGTGG ACCCAGGGCG ATAATTCAGA TGTGCCTGAG 
    GTAGAGGAGG AAACAGAGCC TGCAGAAGAA AAACAACCGA TTAAATCTAC ACCTAAGAAA 
    AGGAAGGTTG AAAAACAGAT TCCAGATGCC ACAAAGAAAA AGAAGAAGGC AACAGTTAAG 
    AAAGAATGTT TCATCACGCA AGAGAGATCA GAGGAAAAGC CTGATAACGA GTCTAACAAA 
    AACAAGAAAA GAAGAAAGAA GAAGAAAACT ATCACAGATG TCCTGACAAG CTCTAAGCCT 
    GTGCCCGGCT CTCCAGTTGA CCTTGTGAGC CTTCTGAAGA CTTACCACAG CCAGACCCGC 
    TCTGTTATTG AGCAGGAGGA ACTGACGTTA CAAGATTCTT GTTTCCTCAG CTGTAATGAC 
    CTCACACACA GCTTGTCTTC CTACCTCAAA GAAGTTTGTC CAAAGTGGGC TAAAATGCAG 
    AAACAGCACA CCCAGACCAG CTCAGTGGTT TTGCTAATTG TTTGTGGATC TGCTTTAAGA 
    ACCATTGATC TCATTAAGCA GCTGGTGACA TTCAAAGGAC AAGCTAAAGT GCTGAAGCTG 
    TTTGCAAAAC ACATCAAAGT GGAAGAACAG ATAAAGTCAT TGAGTAAAGG TGTGACCCAT 
    ATTGCTGTTG GAACTCCTGG GAGAATTTGC GCACTGTTAG AGAAAGAGGG ATTGACTGTG 
    CAAGGACTAC GTTATCTGGT GCTGGACTGG AACTACAGAG ACCAGAAGCA AAGGAGGATG 
    GTGGATGTAC CAGAGGTGAA AGGAGACTTA CTAAAAATGA TGGACCAAGG TCTAATCCAG 
    AGCTGCAGAG AAGGAACGGT TAAAATAGGA CTCTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001006048.2
    CDS47..925
    Translation

    Target ORF information:

    RefSeq Version NM_001006048.2
    Organism Danio rerio(zebrafish)
    Definition Danio rerio cms1 ribosomal small subunit homolog (cmss1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001006048.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTGATG ATTTAGGAGA CGAGTGGTGG ACCCAGGGCG ATAATTCAGA TGTGCCTGAG 
    GTAGAGGAGG AAACAGAGCC TGCAGAAGAA AAACAACCGA TTAAATCTAC ACCTAAGAAA 
    AGGAAGGTTG AAAAACAGAT TCCAGATGCC ACAAAGAAAA AGAAGAAGGC AACAGTTAAG 
    AAAGAATGTT TCATCACGCA AGAGAGATCA GAGGAAAAGC CTGATAACGA GTCTAACAAA 
    AACAAGAAAA GAAGAAAGAA GAAGAAAACT ATCACAGATG TCCTGACAAG CTCTAAGCCT 
    GTGCCCGGCT CTCCAGTTGA CCTTGTGAGC CTTCTGAAGA CTTACCACAG CCAGACCCGC 
    TCTGTTATTG AGCAGGAGGA ACTGACGTTA CAAGATTCTT GTTTCCTCAG CTGTAATGAC 
    CTCACACACA GCTTGTCTTC CTACCTCAAA GAAGTTTGTC CAAAGTGGGC TAAAATGCAG 
    AAACAGCACA CCCAGACCAG CTCAGTGGTT TTGCTAATTG TTTGTGGATC TGCTTTAAGA 
    ACCATTGATC TCATTAAGCA GCTGGTGACA TTCAAAGGAC AAGCTAAAGT GCTGAAGCTG 
    TTTGCAAAAC ACATCAAAGT GGAAGAACAG ATAAAGTCAT TGAGTAAAGG TGTGACCCAT 
    ATTGCTGTTG GAACTCCTGG GAGAATTTGC GCACTGTTAG AGAAAGAGGG ATTGACTGTG 
    CAAGGACTAC GTTATCTGGT GCTGGACTGG AACTACAGAG ACCAGAAGCA AAGGAGGATG 
    GTGGATGTAC CAGAGGTGAA AGGAGACTTA CTAAAAATGA TGGACCAAGG TCTAATCCAG 
    AGCTGCAGAG AAGGAACGGT TAAAATAGGA CTCTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    cmss1 ( XM_021478644.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021334319.1 Danio rerio cms1 ribosomal small subunit homolog (yeast) (cmss1), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa15238
    Clone ID Related Accession (Same CDS sequence) XM_021478644.1
    Accession Version XM_021478644.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 876bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product protein CMSS1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007120.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTGATG ATTTAGGAGA CGAGTGGTGG ACCCAGGGCG ATAATTCAGA TGTGCCTGAG 
    GTAGAGGAGG AAACAGAGCC TGCAGAAGAA AAACAACCGA TTAAATCTAC ACCTAAGAAA 
    AGGAAGGTTG AAAAACAGAT TCCAGATGCC ACAAAGAAAA AGAAGAAGGC AACAGTTAAG 
    AAAGAATGTT TCATCACGCA AGAGAGATCA GAGGAAAAGC CTGATAACGA GTCTAACAAA 
    AACAAGAAAA GAAGAAAGAA GAAAACTATC ACAGATGTCC TGACAAGCTC TAAGCCTGTG 
    CCCGGCTCTC CAGTTGACCT TGTGAGCCTT CTGAAGACTT ACCACAGCCA GACCCGCTCT 
    GTTATTGAGC AGGAGGAACT GACGTTACAA GATTCTTGTT TCCTCAGCTG TAATGACCTC 
    ACACACAGCT TGTCTTCCTA CCTCAAAGAA GTTTGTCCAA AGTGGGCTAA AATGCAGAAA 
    CAGCACACCC AGACCAGCTC AGTGGTTTTG CTAATTGTTT GTGGATCTGC TTTAAGAACC 
    ATTGATCTCA TTAAGCAGCT GGTGACATTC AAAGGACAAG CTAAAGTGCT GAAGCTGTTT 
    GCAAAACACA TCAAAGTGGA AGAACAGATA AAGTCATTGA GTAAAGGTGT GACCCATATT 
    GCTGTTGGAA CTCCTGGGAG AATTTGCGCA CTGTTAGAGA AAGAGGGATT GACTGTGCAA 
    GGACTACGTT ATCTGGTGCT GGACTGGAAC TACAGAGACC AGAAGCAAAG GAGGATGGTG 
    GATGTACCAG AGGTGAAAGG AGACTTACTA AAAATGATGG ACCAAGGTCT AATCCAGAGC 
    TGCAGAGAAG GAACGGTTAA AATAGGACTC TTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021334319.1
    CDS94..969
    Translation

    Target ORF information:

    RefSeq Version XM_021478644.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio cms1 ribosomal small subunit homolog (yeast) (cmss1), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021478644.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTGATG ATTTAGGAGA CGAGTGGTGG ACCCAGGGCG ATAATTCAGA TGTGCCTGAG 
    GTAGAGGAGG AAACAGAGCC TGCAGAAGAA AAACAACCGA TTAAATCTAC ACCTAAGAAA 
    AGGAAGGTTG AAAAACAGAT TCCAGATGCC ACAAAGAAAA AGAAGAAGGC AACAGTTAAG 
    AAAGAATGTT TCATCACGCA AGAGAGATCA GAGGAAAAGC CTGATAACGA GTCTAACAAA 
    AACAAGAAAA GAAGAAAGAA GAAAACTATC ACAGATGTCC TGACAAGCTC TAAGCCTGTG 
    CCCGGCTCTC CAGTTGACCT TGTGAGCCTT CTGAAGACTT ACCACAGCCA GACCCGCTCT 
    GTTATTGAGC AGGAGGAACT GACGTTACAA GATTCTTGTT TCCTCAGCTG TAATGACCTC 
    ACACACAGCT TGTCTTCCTA CCTCAAAGAA GTTTGTCCAA AGTGGGCTAA AATGCAGAAA 
    CAGCACACCC AGACCAGCTC AGTGGTTTTG CTAATTGTTT GTGGATCTGC TTTAAGAACC 
    ATTGATCTCA TTAAGCAGCT GGTGACATTC AAAGGACAAG CTAAAGTGCT GAAGCTGTTT 
    GCAAAACACA TCAAAGTGGA AGAACAGATA AAGTCATTGA GTAAAGGTGT GACCCATATT 
    GCTGTTGGAA CTCCTGGGAG AATTTGCGCA CTGTTAGAGA AAGAGGGATT GACTGTGCAA 
    GGACTACGTT ATCTGGTGCT GGACTGGAAC TACAGAGACC AGAAGCAAAG GAGGATGGTG 
    GATGTACCAG AGGTGAAAGG AGACTTACTA AAAATGATGG ACCAAGGTCT AATCCAGAGC 
    TGCAGAGAAG GAACGGTTAA AATAGGACTC TTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
    BMC genomics17368(2016 05)
    Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


    Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
    Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
    Strausberg RL,Feingold EA,Grouse LH,Derge JG,Klausner RD,Collins FS,Wagner L,Shenmen CM,Schuler GD,Altschul SF,Zeeberg B,Buetow KH,Schaefer CF,Bhat NK,Hopkins RF,Jordan H,Moore T,Max SI,Wang J,Hsieh F,Diatchenko L,Marusina K,Farmer AA,Rubin GM,Hong L,Stapleton M,Soares MB,Bonaldo MF,Casavant TL,Scheetz TE,Brownstein MJ,Usdin TB,Toshiyuki S,Carninci P,Prange C,Raha SS,Loquellano NA,Peters GJ,Abramson RD,Mullahy SJ,Bosak SA,McEwan PJ,McKernan KJ,Malek JA,Gunaratne PH,Richards S,Worley KC,Hale S,Garcia AM,Gay LJ,Hulyk SW,Villalon DK,Muzny DM,Sodergren EJ,Lu X,Gibbs RA,Fahey J,Helton E,Ketteman M,Madan A,Rodrigues S,Sanchez A,Whiting M,Madan A,Young AC,Shevchenko Y,Bouffard GG,Blakesley RW,Touchman JW,Green ED,Dickson MC,Rodriguez AC,Grimwood J,Schmutz J,Myers RM,Butterfield YS,Krzywinski MI,Skalska U,Smailus DE,Schnerch A,Schein JE,Jones SJ,Marra MA,


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