utp3 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	utp3
Entrez Gene ID	447856
Full Name	UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
Synonyms	zgc:92127
General protein information	Preferred Names UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) Names something about silencing protein 10
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001004595.1	NP_001004595.1	something about silencing protein 10

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	UTP3	XP_001142547.2
Drosophila melanogaster (fruit fly)	Sas10	NP_572215.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP002960	XP_311937.4
Homo sapiens (human)	UTP3	NP_065101.1
Canis lupus familiaris (dog)	UTP3	XP_532399.2
Bos taurus (cattle)	UTP3	XP_005208182.1
Mus musculus (house mouse)	Utp3	NP_075541.1
Danio rerio (zebrafish)	utp3	NP_001004595.1
	UTP3	XP_001105717.1
Gallus gallus (chicken)	UTP3	XP_420598.3
Rattus norvegicus (Norway rat)	Utp3	NP_001012036.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

An equation to estimate the difference between theoretically predicted and SDS PAGE-displayed molecular weights for an acidic peptide.
Guan Y, Zhu Q, Huang D, Zhao S, Jan Lo L, Peng J
Scientific reports513370(2015 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following utp3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the utp3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa37099	NM_001004595.1 Latest version!	Danio rerio UTP3 small subunit processome component (utp3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

utp3 ( NM_001004595.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001004595.1 Danio rerio UTP3 small subunit processome component (utp3), mRNA.

Price & Availability↑

CloneID	ODa37099
Clone ID Related Accession (Same CDS sequence)	NM_001004595.1
Accession Version	NM_001004595.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1413bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-28
Organism	Danio rerio(zebrafish)
Product	something about silencing protein 10
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081603.1. ##Evidence-Data-START## Transcript exon combination :: BC081603.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGTCCGAG CAAGAAGGGC AGTAAAGAAG CCTAGAACAA AAAAGCAACA AGAATACGAC 
AGTGATGATC CTGAAGCGTA TACAAATGAA GCCATTCCTG ATAAGAAATC TTCATCTTAT 
GTGGAAGATA AAGTAGATGA ATTCCACAAT GAAAAAATAT CAAAACTCTT AGCCCGAGGA 
GTTCCAGAAA TCAGTGATGA AGAGGATGAA GATAAAGCGG TGGAGGTCAT GCCCTTGACA 
CTTTCTGAGT CAGATGAAGA TGATGATGAA GAAAAAGAAG AGGAAGAGGA TGATGATGAT 
GATGAGGAAG ATGGGACAGA CATGGAGAGC GATCTAGAAG GAAAGAAAGA TGACGATCTC 
CCGAATGACT TGGCTTGGGG AAACAAAAAG AAGATTTTCT ATGATACTGA TTATGCCACA 
AAAAAGGGCA AATCTCTTGA AGAAATTGAG GCAGAAGACA AAGAAGAGGA AGACGAGGCT 
ACAAAAATTC AAAAGAGATT AGCAGCTAAA CTGAGCGAAG AAGACTATGA TTTAAATCTG 
CTTGAAGAGT TTGTTGTGGA CGCTGAAGTG GAGAAGGAGG TGAAGAAAGA GGAAAGGATT 
GTGAAAGATT TAAAGACCTT GTCACAAAAG GAAAAACTCA AACTTCTGAA GAAAGAATCA 
CCAGAGTTGT TGGAACTTAT TCAGGATTTT AAAGCAAAGC TTACAGAATT GAGGGATGAA 
GTTCAGCCAC TTGTGAAGAT GGTCAAGAAT GGACGGATTC CTCCTGGAAA GGGTGCCAAT 
TACATCATTA CAAAACAACA ACTTTATCTT AACTACTGCA CAAACATTAG TTTCTATTTG 
GTTTTGAAAG CTAAGCGAAT TCCTGCACAT AACCATCCTG TGATTGAAAG ATTGCTGACC 
TACAGAAATC TGATAAATGA ATTAGGAGCA GTAGATGCTA GACTGGCTCC TCAACTGCGT 
CAGCTTCTCT CTGGAGAAAA GCCAGACAGA CTGCCAAAGA GATTACCAGG CAGCAAACAT 
ACCAAATTAA CAGAAAAGGC TGGGTTGGAA GAAGCCGAAG AGTCAGAATC GGATGAGGAA 
GCAAATTTGC GCTTCTATAA CGCCATGGCG GAGAAACAGA AACTCAAGAG GAAGAAGAGT 
GAGATGCAGA ATGAGGACAA ATTGGAGGAG AATGAAGAAA TGGAGGGAGA TGCTAAAAGA 
AGAATCACAT ATGAGATGTC CAAGAATAAA GGACTCACAC CCAAGAGGAA GAAGATTGAC 
CGGAATCCAA GAGTCAAGCA CAGAGAGAAA TTTAGACGTG CTCAGATTCG CCGCAAGGGT 
CAGGTTCGTG AGGTGCGGCA TGAGGAAGCG AGATACAGCG GAGAATGGTC TGGTATTCGT 
GCTGGAGTTA AGAGAAGTGT CAAACTCAAG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001004595.1
CDS	142..1554
Translation	MVRARRAVKKPRTKKQQEYDSDDPEAYTNEAIPDKKSSSYVEDKVDEFHNEKISKLLARGVPEISDEEDEDKAVEVMPLTLSESDEDDDEEKEEEEDDDDDEEDGTDMESDLEGKKDDDLPNDLAWGNKKKIFYDTDYATKKGKSLEEIEAEDKEEEDEATKIQKRLAAKLSEEDYDLNLLEEFVVDAEVEKEVKKEERIVKDLKTLSQKEKLKLLKKESPELLELIQDFKAKLTELRDEVQPLVKMVKNGRIPPGKGANYIITKQQLYLNYCTNISFYLVLKAKRIPAHNHPVIERLLTYRNLINELGAVDARLAPQLRQLLSGEKPDRLPKRLPGSKHTKLTEKAGLEEAEESESDEEANLRFYNAMAEKQKLKRKKSEMQNEDKLEENEEMEGDAKRRITYEMSKNKGLTPKRKKIDRNPRVKHREKFRRAQIRRKGQVREVRHEEARYSGEWSGIRAGVKRSVKLK

Target ORF information:

RefSeq Version	NM_001004595.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio UTP3 small subunit processome component (utp3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001004595.1

ORF Insert Sequence:

ATGGTCCGAG CAAGAAGGGC AGTAAAGAAG CCTAGAACAA AAAAGCAACA AGAATACGAC 
AGTGATGATC CTGAAGCGTA TACAAATGAA GCCATTCCTG ATAAGAAATC TTCATCTTAT 
GTGGAAGATA AAGTAGATGA ATTCCACAAT GAAAAAATAT CAAAACTCTT AGCCCGAGGA 
GTTCCAGAAA TCAGTGATGA AGAGGATGAA GATAAAGCGG TGGAGGTCAT GCCCTTGACA 
CTTTCTGAGT CAGATGAAGA TGATGATGAA GAAAAAGAAG AGGAAGAGGA TGATGATGAT 
GATGAGGAAG ATGGGACAGA CATGGAGAGC GATCTAGAAG GAAAGAAAGA TGACGATCTC 
CCGAATGACT TGGCTTGGGG AAACAAAAAG AAGATTTTCT ATGATACTGA TTATGCCACA 
AAAAAGGGCA AATCTCTTGA AGAAATTGAG GCAGAAGACA AAGAAGAGGA AGACGAGGCT 
ACAAAAATTC AAAAGAGATT AGCAGCTAAA CTGAGCGAAG AAGACTATGA TTTAAATCTG 
CTTGAAGAGT TTGTTGTGGA CGCTGAAGTG GAGAAGGAGG TGAAGAAAGA GGAAAGGATT 
GTGAAAGATT TAAAGACCTT GTCACAAAAG GAAAAACTCA AACTTCTGAA GAAAGAATCA 
CCAGAGTTGT TGGAACTTAT TCAGGATTTT AAAGCAAAGC TTACAGAATT GAGGGATGAA 
GTTCAGCCAC TTGTGAAGAT GGTCAAGAAT GGACGGATTC CTCCTGGAAA GGGTGCCAAT 
TACATCATTA CAAAACAACA ACTTTATCTT AACTACTGCA CAAACATTAG TTTCTATTTG 
GTTTTGAAAG CTAAGCGAAT TCCTGCACAT AACCATCCTG TGATTGAAAG ATTGCTGACC 
TACAGAAATC TGATAAATGA ATTAGGAGCA GTAGATGCTA GACTGGCTCC TCAACTGCGT 
CAGCTTCTCT CTGGAGAAAA GCCAGACAGA CTGCCAAAGA GATTACCAGG CAGCAAACAT 
ACCAAATTAA CAGAAAAGGC TGGGTTGGAA GAAGCCGAAG AGTCAGAATC GGATGAGGAA 
GCAAATTTGC GCTTCTATAA CGCCATGGCG GAGAAACAGA AACTCAAGAG GAAGAAGAGT 
GAGATGCAGA ATGAGGACAA ATTGGAGGAG AATGAAGAAA TGGAGGGAGA TGCTAAAAGA 
AGAATCACAT ATGAGATGTC CAAGAATAAA GGACTCACAC CCAAGAGGAA GAAGATTGAC 
CGGAATCCAA GAGTCAAGCA CAGAGAGAAA TTTAGACGTG CTCAGATTCG CCGCAAGGGT 
CAGGTTCGTG AGGTGCGGCA TGAGGAAGCG AGATACAGCG GAGAATGGTC TGGTATTCGT 
GCTGGAGTTA AGAGAAGTGT CAAACTCAAG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

An equation to estimate the difference between theoretically predicted and SDS PAGE-displayed molecular weights for an acidic peptide.
Scientific reports513370(2015 Aug)
Guan Y,Zhu Q,Huang D,Zhao S,Jan Lo L,Peng J