SSX2IPA cDNA ORF clone, Danio rerio(Zebrafish)

The following SSX2IPA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SSX2IPA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa00975 NM_200835.2
Latest version!
Danio rerio synovial sarcoma, X breakpoint 2 interacting protein a (ssx2ipa), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
ODa40528 XM_009296556.3
Latest version!
Danio rerio synovial sarcoma, X breakpoint 2 interacting protein a (ssx2ipa), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
View Old Accession Versions >>
ODa40528 XM_009296556.2 Danio rerio synovial sarcoma, X breakpoint 2 interacting protein a (ssx2ipa), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID ODa00975
    Clone ID Related Accession (Same CDS sequence) NM_200835.2
    Accession Version NM_200835.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1758bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-11-23
    Organism Danio rerio(zebrafish)
    Product afadin- and alpha-actinin-binding protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CU693488.12. On Sep 30, 2011 this sequence version replaced NM_200835.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01001143.1, GDQQ01022699.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGGAGATT GGTGGAGTCC TGCAATGATG CCTGATCCAA CTCTCGACAC CAAAGAGCTT 
    TCCAGTATTT CTGGGATCAG CATGTCTCCC TCCAGGCAAA ACTCCCAGCA TTCACTGCAC
    TCCACCATGG TTCTGCCCAA AAGCACCTAC AGTGTATTGA GTGCCTTCTG CACAGAGGAG
    AACATATCGC AGTGTGTCAC GTATATCAAT CAGGAAGTGT GTTCGCTGGG CTTGTCTGCA
    GTGAGTGTGG AGTGTAAATC GGGCAGTGTG AGTGCCGTGC CGGTGTTAAA TCTGCTGTAT
    GAAGTGCTGC AGCTGCAGAG GAGAGCTCAG CGCGGCCTGC AGGAGCTGGA GACTCAGCAG
    ATAAAGAACT GCAGTGACCT CGAGCATCTG CAGAACAACA ACTGCAGACT CAAAGATCAG
    CTGGAGCACA CCAGGAGAGA GAACTCGGGT CTGCACGAGG GCGAGCGACA GCTGCAGCTC
    AAGATCAAAA CACTACAGAA CTGCCTGAAG TCTGAGAAAG AGGAGGTACA GAAACTGCAG
    AGCATAATCT CCAGTCGTGC CACACAGTAC AATCATGACC TGAAGCGTAA AGAGAGAGAC
    TTCACTAAAC TGAAGGATCG CCTCAACCAG CTGCTCATGG ACAAACGGGA CAAGAAACTC
    TCCATTGAAG TGTCAAACTA TGTGGGACGG TCAGATGGCA AGAGAGGCCT CTGGAAGACG
    GGCAAGATGG AGGCTAGACA TGAGGGTGAG ATGTACAAGG CTCTGCTGAC CGATTACGAG
    GCACGGCAGA GATCTCTGAT GCTGGAGAAC TCGGAACTGA AGAAAGTGTT GCAGCACATG
    AAGAAGGACA TGATCGCTAT TCTCAGTCCG AAGAAACCCT GCGTTAAAGC AGAGCTCGCA
    GACGACAGCC TGGAGCAGGC TGGCTCTGAG TGTGAGGATG AGGCTGGCGA ATCCAGCAGA
    GAGACTCTGG AGCAGTCGTG TGAACAGGCC CGCGAGCAGC TCACCAACAG CATCCGCCTG
    CAGTGGAGGA AACTCAAGAG CCACATGGAG AGACTCGACA GCCAGGCATC ACTGGTGGCG
    TCTCAGGAGC GTGAGGCAGA GGAGCTGATC TCCAGGAAGG AGCAGGAGGA AGAGCTGCAG
    CGCATGAGAC TGGAGCTGCA GCAGTGTAAA GAGTTCATTC ACATGCAGCA GCAGCTCCTA
    CAGCAGCAGA TCAGCTCCCC GTGTGATGAA GAGACGGCTG CTCTGCTGAA CGACTGCTAC
    ACGCTGGAGG AGAAAGAGCG ACTGAAGGAG GAATGGAGAC TCTTTAATGA GCAGAAGAGG
    AACTTTGAGC GAGAAAGGAA GAATTTCACT GAAGCTGCCA TTCGTTTGGG ACACGAGAGG
    AAAGTGTTTG AGGAGGATCG GGCGGCATGG CTGAAGACAC AGTTTTTGAA CATGACTCCA
    TTTGTGGACC GTAAACGGCC GGCGCTGTCT GAACCTCACA GTGCATTATC AGTCGGCACA
    GAACCAGAGG CCAAACTGCA TTTGACTCCT CCGCTGTTCA CTAAGTCTCT GTCCAACTCC
    GTGTTCTGCA CTCCTAAAGC TGCGCCGGTG AAGATGCCCA CCACTGCTGA CCTCTACCGC
    ACACTAAACC TCATTCCAGA GAGCAGAGGT CAGGGGAAAT GTCAGAGTGC TGAGATGTTG
    AGCAGGTCGC GTTTGCGTAA TTCCTCCAGC GACTGCAGCG TGATCTCCCT GGTCAGGGAT
    GAAAACGGCT CTGTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_957129.2
    CDS247..2004
    Translation

    Target ORF information:

    RefSeq Version NM_200835.2
    Organism Danio rerio(zebrafish)
    Definition Danio rerio synovial sarcoma, X breakpoint 2 interacting protein a (ssx2ipa), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_200835.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGGAGATT GGTGGAGTCC TGCAATGATG CCTGATCCAA CTCTCGACAC CAAAGAGCTT 
    TCCAGTATTT CTGGGATCAG CATGTCTCCC TCCAGGCAAA ACTCCCAGCA TTCACTGCAC
    TCCACCATGG TTCTGCCCAA AAGCACCTAC AGTGTATTGA GTGCCTTCTG CACAGAGGAG
    AACATATCGC AGTGTGTCAC GTATATCAAT CAGGAAGTGT GTTCGCTGGG CTTGTCTGCA
    GTGAGTGTGG AGTGTAAATC GGGCAGTGTG AGTGCCGTGC CGGTGTTAAA TCTGCTGTAT
    GAAGTGCTGC AGCTGCAGAG GAGAGCTCAG CGCGGCCTGC AGGAGCTGGA GACTCAGCAG
    ATAAAGAACT GCAGTGACCT CGAGCATCTG CAGAACAACA ACTGCAGACT CAAAGATCAG
    CTGGAGCACA CCAGGAGAGA GAACTCGGGT CTGCACGAGG GCGAGCGACA GCTGCAGCTC
    AAGATCAAAA CACTACAGAA CTGCCTGAAG TCTGAGAAAG AGGAGGTACA GAAACTGCAG
    AGCATAATCT CCAGTCGTGC CACACAGTAC AATCATGACC TGAAGCGTAA AGAGAGAGAC
    TTCACTAAAC TGAAGGATCG CCTCAACCAG CTGCTCATGG ACAAACGGGA CAAGAAACTC
    TCCATTGAAG TGTCAAACTA TGTGGGACGG TCAGATGGCA AGAGAGGCCT CTGGAAGACG
    GGCAAGATGG AGGCTAGACA TGAGGGTGAG ATGTACAAGG CTCTGCTGAC CGATTACGAG
    GCACGGCAGA GATCTCTGAT GCTGGAGAAC TCGGAACTGA AGAAAGTGTT GCAGCACATG
    AAGAAGGACA TGATCGCTAT TCTCAGTCCG AAGAAACCCT GCGTTAAAGC AGAGCTCGCA
    GACGACAGCC TGGAGCAGGC TGGCTCTGAG TGTGAGGATG AGGCTGGCGA ATCCAGCAGA
    GAGACTCTGG AGCAGTCGTG TGAACAGGCC CGCGAGCAGC TCACCAACAG CATCCGCCTG
    CAGTGGAGGA AACTCAAGAG CCACATGGAG AGACTCGACA GCCAGGCATC ACTGGTGGCG
    TCTCAGGAGC GTGAGGCAGA GGAGCTGATC TCCAGGAAGG AGCAGGAGGA AGAGCTGCAG
    CGCATGAGAC TGGAGCTGCA GCAGTGTAAA GAGTTCATTC ACATGCAGCA GCAGCTCCTA
    CAGCAGCAGA TCAGCTCCCC GTGTGATGAA GAGACGGCTG CTCTGCTGAA CGACTGCTAC
    ACGCTGGAGG AGAAAGAGCG ACTGAAGGAG GAATGGAGAC TCTTTAATGA GCAGAAGAGG
    AACTTTGAGC GAGAAAGGAA GAATTTCACT GAAGCTGCCA TTCGTTTGGG ACACGAGAGG
    AAAGTGTTTG AGGAGGATCG GGCGGCATGG CTGAAGACAC AGTTTTTGAA CATGACTCCA
    TTTGTGGACC GTAAACGGCC GGCGCTGTCT GAACCTCACA GTGCATTATC AGTCGGCACA
    GAACCAGAGG CCAAACTGCA TTTGACTCCT CCGCTGTTCA CTAAGTCTCT GTCCAACTCC
    GTGTTCTGCA CTCCTAAAGC TGCGCCGGTG AAGATGCCCA CCACTGCTGA CCTCTACCGC
    ACACTAAACC TCATTCCAGA GAGCAGAGGT CAGGGGAAAT GTCAGAGTGC TGAGATGTTG
    AGCAGGTCGC GTTTGCGTAA TTCCTCCAGC GACTGCAGCG TGATCTCCCT GGTCAGGGAT
    GAAAACGGCT CTGTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODa40528
    Clone ID Related Accession (Same CDS sequence) XM_009296556.3 , XM_009296556.2
    Accession Version XM_009296556.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1755bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product afadin- and alpha-actinin-binding protein isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009296556.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGGAGATT GGTGGAGTCC TGCAATGATG CCTGATCCAA CTCTCGACAC CAAAGAGCTT 
    TCCAGTATTT CTGGGATCAG CATGTCTCCC TCCAGGCAAA ACTCCCAGCA TTCACTGCAC
    TCCACCATGG TTCTGCCCAA AAGCACCTAC AGTGTATTGA GTGCCTTCTG CACAGAGGAG
    AACATATCGC AGTGTGTCAC GTATATCAAT CAGGAAGTGT GTTCGCTGGG CTTGTCTGCA
    GTGAGTGTGG AGTGTAAATC GGGCAGTGTG AGTGCCGTGC CGGTGTTAAA TCTGCTGTAT
    GAAGTGCTGC AGCTGCAGAG GAGAGCTCAG CGCGGCCTGC AGGAGCTGGA GACTCAGCAG
    ATAAAGAACT GCAGTGACCT CGAGCATCTG CAGAACAACA ACTGCAGACT CAAAGATCAG
    CTGGAGCACA CCAGGAGAGA GAACTCGGGT CTGCACGAGG GCGAGCGACA GCTGCAGCTC
    AAGATCAAAA CACTACAGAA CTGCCTGAAG TCTGAGAAAG AGGAGGTACA GAAACTGCAG
    AGCATAATCT CCAGTCGTGC CACACAGTAC AATCATGACC TGAAGCGTAA AGAGAGAGAC
    TTCACTAAAC TGAAGGATCG CCTCAACCAG CTGCTCATGG ACAAACGGGA CAAGAAACTC
    TCCATTGAAG TGTCAAACTA TGTGGGACGG TCAGATGGCA AGAGAGGCCT CTGGAAGACG
    GGCAAGATGG AGGCTAGACA TGAGGGTGAG ATGTACAAGG CTCTGCTGAC CGATTACGAG
    GCACGGCAGA GATCTCTGAT GCTGGAGAAC TCGGAACTGA AGAAAGTGTT GCAGCACATG
    AAGAAGGACA TGATCGCTAT TCTCAGTCCG AAGAAACCCT GCGTTAAAGC AGAGCTCGCA
    GACGACAGCC TGGAGCAGGC TGGCTCTGAG TGTGAGGATG AGGCTGGCGA ATCCAGCAGA
    GAGACTCTGG AGCAGTCGTG TGAACAGGCC CGCGAGCAGC TCACCAACAG CATCCGCCTG
    CAGTGGAGGA AACTCAAGAG CCACATGGAG AGACTCGACA GCCAGGCATC ACTGGTGGCG
    TCTCAGGAGC GTGAGGCAGA GGAGCTGATC TCCAGGAAGG AGCAGGAGGA AGAGCTGCAG
    CGCATGAGAC TGGAGCTGCA GCAGTGTAAA GAGTTCATTC ACATGCAGCA GCAGCTCCTA
    CAGCAGATCA GCTCCCCGTG TGATGAAGAG ACGGCTGCTC TGCTGAACGA CTGCTACACG
    CTGGAGGAGA AAGAGCGACT GAAGGAGGAA TGGAGACTCT TTAATGAGCA GAAGAGGAAC
    TTTGAGCGAG AAAGGAAGAA TTTCACTGAA GCTGCCATTC GTTTGGGACA CGAGAGGAAA
    GTGTTTGAGG AGGATCGGGC GGCATGGCTG AAGACACAGT TTTTGAACAT GACTCCATTT
    GTGGACCGTA AACGGCCGGC GCTGTCTGAA CCTCACAGTG CATTATCAGT CGGCACAGAA
    CCAGAGGCCA AACTGCATTT GACTCCTCCG CTGTTCACTA AGTCTCTGTC CAACTCCGTG
    TTCTGCACTC CTAAAGCTGC GCCGGTGAAG ATGCCCACCA CTGCTGACCT CTACCGCACA
    CTAAACCTCA TTCCAGAGAG CAGAGGTCAG GGGAAATGTC AGAGTGCTGA GATGTTGAGC
    AGGTCGCGTT TGCGTAATTC CTCCAGCGAC TGCAGCGTGA TCTCCCTGGT CAGGGATGAA
    AACGGCTCTG TCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_009294831.1
    CDS223..1977
    Translation

    Target ORF information:

    RefSeq Version XM_009296556.3
    Organism Danio rerio(zebrafish)
    Definition Danio rerio synovial sarcoma, X breakpoint 2 interacting protein a (ssx2ipa), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_009296556.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGGAGATT GGTGGAGTCC TGCAATGATG CCTGATCCAA CTCTCGACAC CAAAGAGCTT 
    TCCAGTATTT CTGGGATCAG CATGTCTCCC TCCAGGCAAA ACTCCCAGCA TTCACTGCAC
    TCCACCATGG TTCTGCCCAA AAGCACCTAC AGTGTATTGA GTGCCTTCTG CACAGAGGAG
    AACATATCGC AGTGTGTCAC GTATATCAAT CAGGAAGTGT GTTCGCTGGG CTTGTCTGCA
    GTGAGTGTGG AGTGTAAATC GGGCAGTGTG AGTGCCGTGC CGGTGTTAAA TCTGCTGTAT
    GAAGTGCTGC AGCTGCAGAG GAGAGCTCAG CGCGGCCTGC AGGAGCTGGA GACTCAGCAG
    ATAAAGAACT GCAGTGACCT CGAGCATCTG CAGAACAACA ACTGCAGACT CAAAGATCAG
    CTGGAGCACA CCAGGAGAGA GAACTCGGGT CTGCACGAGG GCGAGCGACA GCTGCAGCTC
    AAGATCAAAA CACTACAGAA CTGCCTGAAG TCTGAGAAAG AGGAGGTACA GAAACTGCAG
    AGCATAATCT CCAGTCGTGC CACACAGTAC AATCATGACC TGAAGCGTAA AGAGAGAGAC
    TTCACTAAAC TGAAGGATCG CCTCAACCAG CTGCTCATGG ACAAACGGGA CAAGAAACTC
    TCCATTGAAG TGTCAAACTA TGTGGGACGG TCAGATGGCA AGAGAGGCCT CTGGAAGACG
    GGCAAGATGG AGGCTAGACA TGAGGGTGAG ATGTACAAGG CTCTGCTGAC CGATTACGAG
    GCACGGCAGA GATCTCTGAT GCTGGAGAAC TCGGAACTGA AGAAAGTGTT GCAGCACATG
    AAGAAGGACA TGATCGCTAT TCTCAGTCCG AAGAAACCCT GCGTTAAAGC AGAGCTCGCA
    GACGACAGCC TGGAGCAGGC TGGCTCTGAG TGTGAGGATG AGGCTGGCGA ATCCAGCAGA
    GAGACTCTGG AGCAGTCGTG TGAACAGGCC CGCGAGCAGC TCACCAACAG CATCCGCCTG
    CAGTGGAGGA AACTCAAGAG CCACATGGAG AGACTCGACA GCCAGGCATC ACTGGTGGCG
    TCTCAGGAGC GTGAGGCAGA GGAGCTGATC TCCAGGAAGG AGCAGGAGGA AGAGCTGCAG
    CGCATGAGAC TGGAGCTGCA GCAGTGTAAA GAGTTCATTC ACATGCAGCA GCAGCTCCTA
    CAGCAGATCA GCTCCCCGTG TGATGAAGAG ACGGCTGCTC TGCTGAACGA CTGCTACACG
    CTGGAGGAGA AAGAGCGACT GAAGGAGGAA TGGAGACTCT TTAATGAGCA GAAGAGGAAC
    TTTGAGCGAG AAAGGAAGAA TTTCACTGAA GCTGCCATTC GTTTGGGACA CGAGAGGAAA
    GTGTTTGAGG AGGATCGGGC GGCATGGCTG AAGACACAGT TTTTGAACAT GACTCCATTT
    GTGGACCGTA AACGGCCGGC GCTGTCTGAA CCTCACAGTG CATTATCAGT CGGCACAGAA
    CCAGAGGCCA AACTGCATTT GACTCCTCCG CTGTTCACTA AGTCTCTGTC CAACTCCGTG
    TTCTGCACTC CTAAAGCTGC GCCGGTGAAG ATGCCCACCA CTGCTGACCT CTACCGCACA
    CTAAACCTCA TTCCAGAGAG CAGAGGTCAG GGGAAATGTC AGAGTGCTGA GATGTTGAGC
    AGGTCGCGTT TGCGTAATTC CTCCAGCGAC TGCAGCGTGA TCTCCCTGGT CAGGGATGAA
    AACGGCTCTG TCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODa40528
    Clone ID Related Accession (Same CDS sequence) XM_009296556.3 , XM_009296556.2
    Accession Version XM_009296556.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1755bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product afadin- and alpha-actinin-binding protein isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009296556.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGGAGATT GGTGGAGTCC TGCAATGATG CCTGATCCAA CTCTCGACAC CAAAGAGCTT 
    TCCAGTATTT CTGGGATCAG CATGTCTCCC TCCAGGCAAA ACTCCCAGCA TTCACTGCAC
    TCCACCATGG TTCTGCCCAA AAGCACCTAC AGTGTATTGA GTGCCTTCTG CACAGAGGAG
    AACATATCGC AGTGTGTCAC GTATATCAAT CAGGAAGTGT GTTCGCTGGG CTTGTCTGCA
    GTGAGTGTGG AGTGTAAATC GGGCAGTGTG AGTGCCGTGC CGGTGTTAAA TCTGCTGTAT
    GAAGTGCTGC AGCTGCAGAG GAGAGCTCAG CGCGGCCTGC AGGAGCTGGA GACTCAGCAG
    ATAAAGAACT GCAGTGACCT CGAGCATCTG CAGAACAACA ACTGCAGACT CAAAGATCAG
    CTGGAGCACA CCAGGAGAGA GAACTCGGGT CTGCACGAGG GCGAGCGACA GCTGCAGCTC
    AAGATCAAAA CACTACAGAA CTGCCTGAAG TCTGAGAAAG AGGAGGTACA GAAACTGCAG
    AGCATAATCT CCAGTCGTGC CACACAGTAC AATCATGACC TGAAGCGTAA AGAGAGAGAC
    TTCACTAAAC TGAAGGATCG CCTCAACCAG CTGCTCATGG ACAAACGGGA CAAGAAACTC
    TCCATTGAAG TGTCAAACTA TGTGGGACGG TCAGATGGCA AGAGAGGCCT CTGGAAGACG
    GGCAAGATGG AGGCTAGACA TGAGGGTGAG ATGTACAAGG CTCTGCTGAC CGATTACGAG
    GCACGGCAGA GATCTCTGAT GCTGGAGAAC TCGGAACTGA AGAAAGTGTT GCAGCACATG
    AAGAAGGACA TGATCGCTAT TCTCAGTCCG AAGAAACCCT GCGTTAAAGC AGAGCTCGCA
    GACGACAGCC TGGAGCAGGC TGGCTCTGAG TGTGAGGATG AGGCTGGCGA ATCCAGCAGA
    GAGACTCTGG AGCAGTCGTG TGAACAGGCC CGCGAGCAGC TCACCAACAG CATCCGCCTG
    CAGTGGAGGA AACTCAAGAG CCACATGGAG AGACTCGACA GCCAGGCATC ACTGGTGGCG
    TCTCAGGAGC GTGAGGCAGA GGAGCTGATC TCCAGGAAGG AGCAGGAGGA AGAGCTGCAG
    CGCATGAGAC TGGAGCTGCA GCAGTGTAAA GAGTTCATTC ACATGCAGCA GCAGCTCCTA
    CAGCAGATCA GCTCCCCGTG TGATGAAGAG ACGGCTGCTC TGCTGAACGA CTGCTACACG
    CTGGAGGAGA AAGAGCGACT GAAGGAGGAA TGGAGACTCT TTAATGAGCA GAAGAGGAAC
    TTTGAGCGAG AAAGGAAGAA TTTCACTGAA GCTGCCATTC GTTTGGGACA CGAGAGGAAA
    GTGTTTGAGG AGGATCGGGC GGCATGGCTG AAGACACAGT TTTTGAACAT GACTCCATTT
    GTGGACCGTA AACGGCCGGC GCTGTCTGAA CCTCACAGTG CATTATCAGT CGGCACAGAA
    CCAGAGGCCA AACTGCATTT GACTCCTCCG CTGTTCACTA AGTCTCTGTC CAACTCCGTG
    TTCTGCACTC CTAAAGCTGC GCCGGTGAAG ATGCCCACCA CTGCTGACCT CTACCGCACA
    CTAAACCTCA TTCCAGAGAG CAGAGGTCAG GGGAAATGTC AGAGTGCTGA GATGTTGAGC
    AGGTCGCGTT TGCGTAATTC CTCCAGCGAC TGCAGCGTGA TCTCCCTGGT CAGGGATGAA
    AACGGCTCTG TCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_009294831.1
    CDS243..1997
    Translation

    Target ORF information:

    RefSeq Version XM_009296556.2
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio synovial sarcoma, X breakpoint 2 interacting protein a (ssx2ipa), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_009296556.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGGAGATT GGTGGAGTCC TGCAATGATG CCTGATCCAA CTCTCGACAC CAAAGAGCTT 
    TCCAGTATTT CTGGGATCAG CATGTCTCCC TCCAGGCAAA ACTCCCAGCA TTCACTGCAC
    TCCACCATGG TTCTGCCCAA AAGCACCTAC AGTGTATTGA GTGCCTTCTG CACAGAGGAG
    AACATATCGC AGTGTGTCAC GTATATCAAT CAGGAAGTGT GTTCGCTGGG CTTGTCTGCA
    GTGAGTGTGG AGTGTAAATC GGGCAGTGTG AGTGCCGTGC CGGTGTTAAA TCTGCTGTAT
    GAAGTGCTGC AGCTGCAGAG GAGAGCTCAG CGCGGCCTGC AGGAGCTGGA GACTCAGCAG
    ATAAAGAACT GCAGTGACCT CGAGCATCTG CAGAACAACA ACTGCAGACT CAAAGATCAG
    CTGGAGCACA CCAGGAGAGA GAACTCGGGT CTGCACGAGG GCGAGCGACA GCTGCAGCTC
    AAGATCAAAA CACTACAGAA CTGCCTGAAG TCTGAGAAAG AGGAGGTACA GAAACTGCAG
    AGCATAATCT CCAGTCGTGC CACACAGTAC AATCATGACC TGAAGCGTAA AGAGAGAGAC
    TTCACTAAAC TGAAGGATCG CCTCAACCAG CTGCTCATGG ACAAACGGGA CAAGAAACTC
    TCCATTGAAG TGTCAAACTA TGTGGGACGG TCAGATGGCA AGAGAGGCCT CTGGAAGACG
    GGCAAGATGG AGGCTAGACA TGAGGGTGAG ATGTACAAGG CTCTGCTGAC CGATTACGAG
    GCACGGCAGA GATCTCTGAT GCTGGAGAAC TCGGAACTGA AGAAAGTGTT GCAGCACATG
    AAGAAGGACA TGATCGCTAT TCTCAGTCCG AAGAAACCCT GCGTTAAAGC AGAGCTCGCA
    GACGACAGCC TGGAGCAGGC TGGCTCTGAG TGTGAGGATG AGGCTGGCGA ATCCAGCAGA
    GAGACTCTGG AGCAGTCGTG TGAACAGGCC CGCGAGCAGC TCACCAACAG CATCCGCCTG
    CAGTGGAGGA AACTCAAGAG CCACATGGAG AGACTCGACA GCCAGGCATC ACTGGTGGCG
    TCTCAGGAGC GTGAGGCAGA GGAGCTGATC TCCAGGAAGG AGCAGGAGGA AGAGCTGCAG
    CGCATGAGAC TGGAGCTGCA GCAGTGTAAA GAGTTCATTC ACATGCAGCA GCAGCTCCTA
    CAGCAGATCA GCTCCCCGTG TGATGAAGAG ACGGCTGCTC TGCTGAACGA CTGCTACACG
    CTGGAGGAGA AAGAGCGACT GAAGGAGGAA TGGAGACTCT TTAATGAGCA GAAGAGGAAC
    TTTGAGCGAG AAAGGAAGAA TTTCACTGAA GCTGCCATTC GTTTGGGACA CGAGAGGAAA
    GTGTTTGAGG AGGATCGGGC GGCATGGCTG AAGACACAGT TTTTGAACAT GACTCCATTT
    GTGGACCGTA AACGGCCGGC GCTGTCTGAA CCTCACAGTG CATTATCAGT CGGCACAGAA
    CCAGAGGCCA AACTGCATTT GACTCCTCCG CTGTTCACTA AGTCTCTGTC CAACTCCGTG
    TTCTGCACTC CTAAAGCTGC GCCGGTGAAG ATGCCCACCA CTGCTGACCT CTACCGCACA
    CTAAACCTCA TTCCAGAGAG CAGAGGTCAG GGGAAATGTC AGAGTGCTGA GATGTTGAGC
    AGGTCGCGTT TGCGTAATTC CTCCAGCGAC TGCAGCGTGA TCTCCCTGGT CAGGGATGAA
    AACGGCTCTG TCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.