rer1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	rer1
Entrez Gene ID	393648
Full Name	retention in endoplasmic reticulum sorting receptor 1
Synonyms	zgc:65968
General protein information	Preferred Names retention in endoplasmic reticulum sorting receptor 1 Names protein RER1 RER1 retention in endoplasmic reticulum 1 homolog
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005167298.4	XP_005167355.2	protein RER1 isoform X2
XM_005167296.3	XP_005167353.2	protein RER1 isoform X1
XM_005167296.4	XP_005167353.2	protein RER1 isoform X1
XM_005167298.3	XP_005167355.2	protein RER1 isoform X2
XM_005167299.3	XP_005167356.1	protein RER1 isoform X1
XM_005167299.4	XP_005167356.1	protein RER1 isoform X1
NM_200675.2	NP_956969.1	protein RER1

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	RER1	XP_005620477.1
Gallus gallus (chicken)	RER1	NP_001006300.1
Arabidopsis thaliana (thale cress)	ATRER1A	NP_195633.1
Oryza sativa (rice)	Os01g0106200	NP_001041774.1
Mus musculus (house mouse)	Rer1	NP_080671.1
Danio rerio (zebrafish)	rer1	NP_956969.1
Saccharomyces cerevisiae (baker's yeast)	RER1	NP_009925.1
Kluyveromyces lactis	KLLA0A08624g	XP_451379.1
Eremothecium gossypii	AGOS_AAL002W	NP_982540.1
Schizosaccharomyces pombe (fission yeast)	rer1	NP_594831.1
Drosophila melanogaster (fruit fly)	CG11857	NP_651362.1
Caenorhabditis elegans (roundworm)	rer-1	NP_495878.1
Xenopus tropicalis (tropical clawed frog)	rer1	NP_001011464.1
Homo sapiens (human)	RER1	NP_008964.3
Pan troglodytes (chimpanzee)	RER1	XP_001149559.2
	RER1	XP_001084609.1
Rattus norvegicus (Norway rat)	Rer1	NP_001034101.1
Bos taurus (cattle)	RER1	NP_001098962.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP011996	XP_320536.3
Magnaporthe oryzae (rice blast fungus)	MGG_06273	XP_003717317.1
Neurospora crassa	NCU06447	XP_957338.1
Arabidopsis thaliana (thale cress)	RER1B	NP_179754.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Rer1p maintains ciliary length and signaling by regulating ?-secretase activity and Foxj1a levels.
Jurisch-Yaksi N, Rose AJ, Lu H, Raemaekers T, Munck S, Baatsen P, Baert V, Vermeire W, Scales SJ, Verleyen D, Vandepoel R, Tylzanowski P, Yaksi E, de Ravel T, Yost HJ, Froyen G, Arrington CB, Annaert W
The Journal of cell biology200(6)709-20(2013 Mar)

Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Rer1p depletion reduced ciliary length and function by increasing gamma-secretase complex assembly and activity and, consequently, enhancing Notch signaling as well as reducing Foxj1a expression.
Title: Rer1p maintains ciliary length and signaling by regulating ?-secretase activity and Foxj1a levels.

The following rer1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rer1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa03612	NM_200675.2 Latest version!	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa03612	XM_005167296.4 Latest version!	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa03612	XM_005167299.4 Latest version!	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa40487	XM_005167298.4 Latest version!	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
View Old Accession Versions >>
ODa03612	XM_005167296.3	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa40487	XM_005167298.3	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa03612	XM_005167299.3	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rer1 ( NM_200675.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956969.1 Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), mRNA.

Price & Availability↑

CloneID	ODa03612
Clone ID Related Accession (Same CDS sequence)	XM_005167296.3 , XM_005167296.4 , XM_005167299.3 , XM_005167299.4 , NM_200675.2
Accession Version	NM_200675.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 591bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	protein RER1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY398406.1. On Jan 23, 2004 this sequence version replaced NM_200675.1. ##Evidence-Data-START## Transcript exon combination :: AY398406.1, EH583745.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956969.1
CDS	44..634
Translation	MPEGDSAGESIHGKPSAIGNFFKRLGQIYQSWLDKSTPFSAVRWASTLILTAIYMIRVYILQGWYIVTYALGIYHLNLFIAFLSPKVDPSLLDDPDEGPALPTKQNEEFRPFIRRLPEFKFWHSATKGIVIAMICTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYLPFTHGKRTYRGKDDTGKTFAS

Target ORF information:

RefSeq Version	NM_200675.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200675.2

ORF Insert Sequence:

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rer1 ( XM_005167296.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167353.2 Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa03612
Clone ID Related Accession (Same CDS sequence)	XM_005167296.3 , XM_005167296.4 , XM_005167299.3 , XM_005167299.4 , NM_200675.2
Accession Version	XM_005167296.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 591bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	protein RER1 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005167296.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167353.2
CDS	129..719
Translation	MPEGDSAGESIHGKPSAIGNFFKRLGQIYQSWLDKSTPFSAVRWASTLILTAIYMIRVYILQGWYIVTYALGIYHLNLFIAFLSPKVDPSLLDDPDEGPALPTKQNEEFRPFIRRLPEFKFWHSATKGIVIAMICTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYLPFTHGKRTYRGKDDTGKTFAS

Target ORF information:

RefSeq Version	XM_005167296.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167296.3

ORF Insert Sequence:

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rer1 ( XM_005167296.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167353.2 Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa03612
Clone ID Related Accession (Same CDS sequence)	XM_005167296.3 , XM_005167296.4 , XM_005167299.3 , XM_005167299.4 , NM_200675.2
Accession Version	XM_005167296.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 591bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	protein RER1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005167296.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167353.2
CDS	126..716
Translation	MPEGDSAGESIHGKPSAIGNFFKRLGQIYQSWLDKSTPFSAVRWASTLILTAIYMIRVYILQGWYIVTYALGIYHLNLFIAFLSPKVDPSLLDDPDEGPALPTKQNEEFRPFIRRLPEFKFWHSATKGIVIAMICTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYLPFTHGKRTYRGKDDTGKTFAS

Target ORF information:

RefSeq Version	XM_005167296.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167296.4

ORF Insert Sequence:

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rer1 ( XM_005167299.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167356.1 Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa03612
Clone ID Related Accession (Same CDS sequence)	XM_005167296.3 , XM_005167296.4 , XM_005167299.3 , XM_005167299.4 , NM_200675.2
Accession Version	XM_005167299.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 591bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	protein RER1 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005167299.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167356.1
CDS	131..721
Translation	MPEGDSAGESIHGKPSAIGNFFKRLGQIYQSWLDKSTPFSAVRWASTLILTAIYMIRVYILQGWYIVTYALGIYHLNLFIAFLSPKVDPSLLDDPDEGPALPTKQNEEFRPFIRRLPEFKFWHSATKGIVIAMICTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYLPFTHGKRTYRGKDDTGKTFAS

Target ORF information:

RefSeq Version	XM_005167299.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167299.3

ORF Insert Sequence:

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rer1 ( XM_005167299.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167356.1 Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa03612
Clone ID Related Accession (Same CDS sequence)	XM_005167296.3 , XM_005167296.4 , XM_005167299.3 , XM_005167299.4 , NM_200675.2
Accession Version	XM_005167299.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 591bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	protein RER1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005167299.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167356.1
CDS	131..721
Translation	MPEGDSAGESIHGKPSAIGNFFKRLGQIYQSWLDKSTPFSAVRWASTLILTAIYMIRVYILQGWYIVTYALGIYHLNLFIAFLSPKVDPSLLDDPDEGPALPTKQNEEFRPFIRRLPEFKFWHSATKGIVIAMICTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYLPFTHGKRTYRGKDDTGKTFAS

Target ORF information:

RefSeq Version	XM_005167299.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167299.4

ORF Insert Sequence:

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGGCAA GGACGACACA GGGAAAACCT TTGCTAGTTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rer1 ( XM_005167298.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167355.2 Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X2, mRNA.

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CloneID	ODa40487
Clone ID Related Accession (Same CDS sequence)	XM_005167298.4 , XM_005167298.3
Accession Version	XM_005167298.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 567bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	protein RER1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005167298.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGAGGA AACATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167355.2
CDS	111..677
Translation	MPEGDSAGESIHGKPSAIGNFFKRLGQIYQSWLDKSTPFSAVRWASTLILTAIYMIRVYILQGWYIVTYALGIYHLNLFIAFLSPKVDPSLLDDPDEGPALPTKQNEEFRPFIRRLPEFKFWHSATKGIVIAMICTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYLPFTHGKRTYREET

Target ORF information:

RefSeq Version	XM_005167298.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167298.4

ORF Insert Sequence:

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGAGGA AACATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rer1 ( XM_005167298.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167355.2 Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa40487
Clone ID Related Accession (Same CDS sequence)	XM_005167298.4 , XM_005167298.3
Accession Version	XM_005167298.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 567bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	protein RER1 isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005167298.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGAGGA AACATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167355.2
CDS	111..677
Translation	MPEGDSAGESIHGKPSAIGNFFKRLGQIYQSWLDKSTPFSAVRWASTLILTAIYMIRVYILQGWYIVTYALGIYHLNLFIAFLSPKVDPSLLDDPDEGPALPTKQNEEFRPFIRRLPEFKFWHSATKGIVIAMICTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYLPFTHGKRTYREET

Target ORF information:

RefSeq Version	XM_005167298.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio retention in endoplasmic reticulum sorting receptor 1 (rer1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167298.3

ORF Insert Sequence:

ATGCCAGAAG GAGACAGTGC CGGTGAATCC ATCCATGGGA AACCATCAGC GATCGGGAAC 
TTCTTTAAGC GGCTCGGACA GATTTATCAG TCATGGTTGG ATAAGTCAAC GCCGTTCTCA 
GCAGTCCGAT GGGCATCCAC GCTTATTCTA ACGGCCATAT ATATGATCAG AGTATATATA 
CTACAGGGGT GGTACATAGT CACATATGCT CTTGGGATCT ACCACCTTAA CCTCTTCATT 
GCTTTCCTCT CACCAAAAGT GGATCCCTCA TTGCTCGATG ATCCAGATGA GGGTCCGGCA 
CTACCCACAA AACAGAACGA AGAGTTCCGG CCGTTCATCA GGAGGTTGCC AGAGTTCAAG 
TTCTGGCATT CAGCGACGAA AGGCATCGTC ATCGCTATGA TTTGCACATT CTTCGACGCC 
TTTAACGTGC CAGTGTTTTG GCCCATCCTC GTAATGTATT TCATCATGCT GTTCTGCATC 
ACCATGAAAC GGCAGATCAA GCACATGATC AAGTATAGAT ACCTGCCCTT CACACACGGG 
AAGAGGACTT ACAGAGAGGA AACATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Rer1p maintains ciliary length and signaling by regulating ?-secretase activity and Foxj1a levels.
The Journal of cell biology200(6)709-20(2013 Mar)
Jurisch-Yaksi N,Rose AJ,Lu H,Raemaekers T,Munck S,Baatsen P,Baert V,Vermeire W,Scales SJ,Verleyen D,Vandepoel R,Tylzanowski P,Yaksi E,de Ravel T,Yost HJ,Froyen G,Arrington CB,Annaert W

Hematopoietic gene expression profile in zebrafish kidney marrow.
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
Song HD,Sun XJ,Deng M,Zhang GW,Zhou Y,Wu XY,Sheng Y,Chen Y,Ruan Z,Jiang CL,Fan HY,Zon LI,Kanki JP,Liu TX,Look AT,Chen Z

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rer1 cDNA ORF clone, Danio rerio(zebrafish)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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