tnfaip8l1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	tnfaip8l1
Entrez Gene ID	393303
Full Name	tumor necrosis factor, alpha-induced protein 8-like 1
Synonyms	TIPE1,si:dkey-49m19.6,tnfaip8,zgc:55331
General protein information	Preferred Names tumor necrosis factor, alpha-induced protein 8-like 1 Names tumor necrosis factor alpha-induced protein 8-like protein 1 TNF alpha-induced protein 8-like protein 1 TNFAIP8-like protein 1 tumor necrosis factor, alpha-induced protein 8-like protein 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200332.2	NP_956626.1	tumor necrosis factor alpha-induced protein 8-like protein 1
NM_200332.1	NP_956626.1	tumor necrosis factor alpha-induced protein 8-like protein 1

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Tnfaip8l1	NP_079842.2
Homo sapiens (human)	TNFAIP8L1	NP_001161414.1
	TNFAIP8L1	XP_001081997.1
Gallus gallus (chicken)	TNFAIP8L1	NP_001006343.1
Bos taurus (cattle)	TNFAIP8L1	NP_001096740.1
Rattus norvegicus (Norway rat)	Tnfaip8l1	XP_006244433.1
Pan troglodytes (chimpanzee)	TNFAIP8L1	XP_524063.2
Canis lupus familiaris (dog)	TNFAIP8L1	XP_005633087.1
Danio rerio (zebrafish)	tnfaip8l1	NP_956626.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts.
Sullivan C, Lage CR, Yoder JA, Postlethwait JH, Kim CH
PloS one12(6)e0179517(2017)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Coherent but overlapping expression of microRNAs and their targets during vertebrate development.
Shkumatava A, Stark A, Sive H, Bartel DP
Genes & development23(4)466-81(2009 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following tnfaip8l1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tnfaip8l1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa00280	NM_200332.2 Latest version!	Danio rerio tumor necrosis factor, alpha-induced protein 8-like 1 (tnfaip8l1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
View Old Accession Versions >>
ODa00280	NM_200332.1	Danio rerio tumor necrosis factor, alpha-induced protein 8-like 1 (tnfaip8l1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

tnfaip8l1 ( NM_200332.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956626.1 Danio rerio tumor necrosis factor, alpha-induced protein 8-like 1 (tnfaip8l1), mRNA.

Price & Availability↑

CloneID	ODa00280
Clone ID Related Accession (Same CDS sequence)	NM_200332.2 , NM_200332.1
Accession Version	NM_200332.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 561bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	tumor necrosis factor alpha-induced protein 8-like protein 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX649252.8. On Jan 20, 2018 this sequence version replaced NM_200332.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC052765.1, GDQH01013891.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476743 [ECO:0000348] ##Evidence-Data-END##

ATGGACTCGT TCAGCACCAA GAACCTAGCC CTGCAGGCGC AGAAGAAGCT CATGAGCAAG 
ATGGCGACCA AGACAGTGGC CAACCTCTTT ATAGACGACA CCAGCAGCGA GGTACTGGAC 
GAGCTGTACA GAGTCACCAA AGAGTACACG CGCAACCGCA AGGAGGCCCA GAAGATCATC 
AAAAACCTCA TCAAGATGGT GGTCAAGTTG GGCGTCCTCT ACCGCAACGG TCAATTCAAC 
AACGAGGAGC TAGCGTTAGT CGAGCGTTTT CGTAAGAAGG TGCATACGCT GGCGATGACA 
GCTGTTAGCT TCTACCAGAT CGACTTCACT TTTGATCGAC GCGTCATGAG TAATCTACTC 
AATGACTGCC GTGAACTTCT GCACCAGGCC ATCAATCGGC ATCTAACGGC GAAATCTCAC 
GCCCGAATCA ACCATGTCTT CAATCATTTC GCCGATTGTG ACTTCCTCGC GACGCTATAC 
GGACCTTCAG AAGTGTACCG CGGCCACTTG CAGAAGATCT GTGAAGGAGT CAACAAGATG 
CTGGACGAAG GCAATCTTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956626.1
CDS	196..756
Translation	MDSFSTKNLALQAQKKLMSKMATKTVANLFIDDTSSEVLDELYRVTKEYTRNRKEAQKIIKNLIKMVVKLGVLYRNGQFNNEELALVERFRKKVHTLAMTAVSFYQIDFTFDRRVMSNLLNDCRELLHQAINRHLTAKSHARINHVFNHFADCDFLATLYGPSEVYRGHLQKICEGVNKMLDEGNL

Target ORF information:

RefSeq Version	NM_200332.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio tumor necrosis factor, alpha-induced protein 8-like 1 (tnfaip8l1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200332.2

ORF Insert Sequence:

ATGGACTCGT TCAGCACCAA GAACCTAGCC CTGCAGGCGC AGAAGAAGCT CATGAGCAAG 
ATGGCGACCA AGACAGTGGC CAACCTCTTT ATAGACGACA CCAGCAGCGA GGTACTGGAC 
GAGCTGTACA GAGTCACCAA AGAGTACACG CGCAACCGCA AGGAGGCCCA GAAGATCATC 
AAAAACCTCA TCAAGATGGT GGTCAAGTTG GGCGTCCTCT ACCGCAACGG TCAATTCAAC 
AACGAGGAGC TAGCGTTAGT CGAGCGTTTT CGTAAGAAGG TGCATACGCT GGCGATGACA 
GCTGTTAGCT TCTACCAGAT CGACTTCACT TTTGATCGAC GCGTCATGAG TAATCTACTC 
AATGACTGCC GTGAACTTCT GCACCAGGCC ATCAATCGGC ATCTAACGGC GAAATCTCAC 
GCCCGAATCA ACCATGTCTT CAATCATTTC GCCGATTGTG ACTTCCTCGC GACGCTATAC 
GGACCTTCAG AAGTGTACCG CGGCCACTTG CAGAAGATCT GTGAAGGAGT CAACAAGATG 
CTGGACGAAG GCAATCTTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

tnfaip8l1 ( NM_200332.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956626.1 Danio rerio tumor necrosis factor, alpha-induced protein 8-like 1 (tnfaip8l1), mRNA.

Price & Availability↑

CloneID	ODa00280
Clone ID Related Accession (Same CDS sequence)	NM_200332.2 , NM_200332.1
Accession Version	NM_200332.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 561bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-11-01
Organism	Danio rerio(zebrafish)
Product	tumor necrosis factor alpha-induced protein 8-like protein 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC052765.1. On or before Aug 31, 2013 this sequence version replaced XM_005161592.1, XM_691182.1. ##Evidence-Data-START## Transcript exon combination :: BC052765.1 [ECO:0000332] ##Evidence-Data-END##

ATGGACTCGT TCAGCACCAA GAACCTAGCC CTGCAGGCGC AGAAGAAGCT CATGAGCAAG 
ATGGCGACCA AGACAGTGGC CAACCTCTTT ATAGACGACA CCAGCAGCGA GGTACTGGAC 
GAGCTGTACA GAGTCACCAA AGAGTACACG CGCAACCGCA AGGAGGCCCA GAAGATCATC 
AAAAACCTCA TCAAGATGGT GGTCAAGTTG GGCGTCCTCT ACCGCAACGG TCAATTCAAC 
AACGAGGAGC TAGCGTTAGT CGAGCGTTTT CGTAAGAAGG TGCATACGCT GGCGATGACA 
GCTGTTAGCT TCTACCAGAT CGACTTCACT TTTGATCGAC GCGTCATGAG TAATCTACTC 
AATGACTGCC GTGAACTTCT GCACCAGGCC ATCAATCGGC ATCTAACGGC GAAATCTCAC 
GCCCGAATCA ACCATGTCTT CAATCATTTC GCCGATTGTG ACTTCCTCGC GACGCTATAC 
GGACCTTCAG AAGTGTACCG CGGCCACTTG CAGAAGATCT GTGAAGGAGT CAACAAGATG 
CTGGACGAAG GCAATCTTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956626.1
CDS	196..756
Translation	MDSFSTKNLALQAQKKLMSKMATKTVANLFIDDTSSEVLDELYRVTKEYTRNRKEAQKIIKNLIKMVVKLGVLYRNGQFNNEELALVERFRKKVHTLAMTAVSFYQIDFTFDRRVMSNLLNDCRELLHQAINRHLTAKSHARINHVFNHFADCDFLATLYGPSEVYRGHLQKICEGVNKMLDEGNL

Target ORF information:

RefSeq Version	NM_200332.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio tumor necrosis factor, alpha-induced protein 8-like 1 (tnfaip8l1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200332.1

ORF Insert Sequence:

ATGGACTCGT TCAGCACCAA GAACCTAGCC CTGCAGGCGC AGAAGAAGCT CATGAGCAAG 
ATGGCGACCA AGACAGTGGC CAACCTCTTT ATAGACGACA CCAGCAGCGA GGTACTGGAC 
GAGCTGTACA GAGTCACCAA AGAGTACACG CGCAACCGCA AGGAGGCCCA GAAGATCATC 
AAAAACCTCA TCAAGATGGT GGTCAAGTTG GGCGTCCTCT ACCGCAACGG TCAATTCAAC 
AACGAGGAGC TAGCGTTAGT CGAGCGTTTT CGTAAGAAGG TGCATACGCT GGCGATGACA 
GCTGTTAGCT TCTACCAGAT CGACTTCACT TTTGATCGAC GCGTCATGAG TAATCTACTC 
AATGACTGCC GTGAACTTCT GCACCAGGCC ATCAATCGGC ATCTAACGGC GAAATCTCAC 
GCCCGAATCA ACCATGTCTT CAATCATTTC GCCGATTGTG ACTTCCTCGC GACGCTATAC 
GGACCTTCAG AAGTGTACCG CGGCCACTTG CAGAAGATCT GTGAAGGAGT CAACAAGATG 
CTGGACGAAG GCAATCTTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts.
PloS one12(6)e0179517(2017)
Sullivan C,Lage CR,Yoder JA,Postlethwait JH,Kim CH

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Coherent but overlapping expression of microRNAs and their targets during vertebrate development.
Genes & development23(4)466-81(2009 Feb)
Shkumatava A,Stark A,Sive H,Bartel DP