sox8b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	sox8b
Entrez Gene ID	386704
Full Name	SRY (sex determining region Y)-box 8b
Synonyms	sox8,zgc:109880
General protein information	Preferred Names SRY (sex determining region Y)-box 8b Names transcription factor SOX-8 SRY-box containing gene 8
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001025465.1	NP_001020636.1	transcription factor SOX-8

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Functional constraints on SoxE proteins in neural crest development: The importance of differential expression for evolution of protein activity.
Lee EM, Yuan T, Ballim RD, Nguyen K, Kelsh RN, Medeiros DM, McCauley DW
Developmental biology418(1)166-178(2016 10)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.
Wang Y, Lu Y, Zhang Y, Ning Z, Li Y, Zhao Q, Lu H, Huang R, Xia X, Feng Q, Liang X, Liu K, Zhang L, Lu T, Huang T, Fan D, Weng Q, Zhu C, Lu Y, Li W, Wen Z, Zhou C, Tian Q, Kang X, Shi M, Zhang W, Jang S, Du F, He S, Liao L, Li Y, Gui B, He H, Ning Z, Yang C, He L, Luo L, Yang R, Luo Q, Liu X, Li S, Huang W, Xiao L, Lin H, Han B, Zhu Z
Nature genetics47(6)625-31(2015 Jun)

Early depletion of primordial germ cells in zebrafish promotes testis formation.
Tzung KW, Goto R, Saju JM, Sreenivasan R, Saito T, Arai K, Yamaha E, Hossain MS, Calvert ME, Orb?n L
Stem cell reports4(1)61-73(2015 Jan)

Characterization of the trunk neural crest in the bamboo shark, Chiloscyllium punctatum.
Juarez M, Reyes M, Coleman T, Rotenstein L, Sao S, Martinez D, Jones M, Mackelprang R, De Bellard ME
The Journal of comparative neurology521(14)3303-20(2013 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following sox8b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sox8b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa35852	NM_001025465.1 Latest version!	Danio rerio SRY-box transcription factor 8b (sox8b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

sox8b ( NM_001025465.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001020636.1 Danio rerio SRY-box transcription factor 8b (sox8b), mRNA.

Price & Availability↑

CloneID	ODa35852
Clone ID Related Accession (Same CDS sequence)	NM_001025465.1
Accession Version	NM_001025465.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1077bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-30
Organism	Danio rerio(zebrafish)
Product	transcription factor SOX-8
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY883015.1. ##Evidence-Data-START## CDS exon combination :: AY883015.1, BC099993.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAGCGAGG AGCGGGAAAA GTGCAGCAGC CCGACCGGGT CCTGCAGCTC CGAGTGTCCG 
GATGAATGCG ACTCTGACCC GTCCTGCTCT CCAGCAGGAC CCGCCGCGCT CCGGATGGGT 
CAACAAGCGG AGGATGAGGA CGGCAGATTT CCGGTGTGTA TCCGGGACGC GGTGTCGCAG 
GTGCTGAAGG GCTACGACTG GTCTCTGGTG CCCATGCCGG TGCGGGTGAG CGGCTCCGGG 
AAGAGCAAAC CGCACGTCAA GAGACCCATG AACGCGTTTA TGGTTTGGGC TCAAGCCGCG 
CGGAGGAAAC TGGCGGACCA GTACCCGCAC CTGCACAACG CGGAGCTCAG CAAAACACTC 
GGCAAACTCT GGAGACTGCT GACGGAGAGC GAGAAGAGGC CGTTCGTGGA GGAGGCAGAG 
CGACTGAGGG TTCAGCACAA GAAGGATCAT CCGGATTATA AATACCAGCC CAGGAGACGG 
AAGAGTGTGA AGCCGGGCCA CGCTGAGTCT GAAGCCGGCT CCGAGCTGAT GCAGCACATG 
TATAAAGCGG AGCCGGGAAT GGGTCGACTG ACTGGGTCAC CGGACCACAT CACTGACCAC 
ACAGGTCATA CTCACGGTCC ACCGACTCCT CCAACCACCC CCAAAACAGA GCATCCTCAG 
GCCCCCAAAC AGAACATTGA CTTCAGCAAC GTGGACATCT CCGAGCTCAG CACGGACGTC 
ATCGGCAACT TGACCTTTGA CCTGCAGGAG TTTGACCAGT ACCTGCCTCT GACCCCAGAT 
CAGGGCGCCT GCAGCCGGAG GGCGCCCCCT GCTGGAGCAC ACCTGCACCC ACAGCGAGTG 
CACATAAAGA CGGAGCAGCG GAGCCCGCAG CACTACAGTG AGCACAGCAG CACGCTTTAC 
AGCAGCAGCA GCAGCAGCGC ACAGTGTGAA TACACAGAGC ACAGCTTCTA CAGCCCGTAC 
TCCAGCTACC CGTACCCATA CCCATACCTG CACAGGCCCA TACTCAACAT CCCCGCACCG 
CACAGCTCCT CTGCACACTG GGACCCCCCC GTCTACACCA CTCTGTCCAG ACCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001020636.1
CDS	143..1219
Translation	MSEEREKCSSPTGSCSSECPDECDSDPSCSPAGPAALRMGQQAEDEDGRFPVCIRDAVSQVLKGYDWSLVPMPVRVSGSGKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLTESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGHAESEAGSELMQHMYKAEPGMGRLTGSPDHITDHTGHTHGPPTPPTTPKTEHPQAPKQNIDFSNVDISELSTDVIGNLTFDLQEFDQYLPLTPDQGACSRRAPPAGAHLHPQRVHIKTEQRSPQHYSEHSSTLYSSSSSSAQCEYTEHSFYSPYSSYPYPYPYLHRPILNIPAPHSSSAHWDPPVYTTLSRP

Target ORF information:

RefSeq Version	NM_001025465.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio SRY-box transcription factor 8b (sox8b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001025465.1

ORF Insert Sequence:

ATGAGCGAGG AGCGGGAAAA GTGCAGCAGC CCGACCGGGT CCTGCAGCTC CGAGTGTCCG 
GATGAATGCG ACTCTGACCC GTCCTGCTCT CCAGCAGGAC CCGCCGCGCT CCGGATGGGT 
CAACAAGCGG AGGATGAGGA CGGCAGATTT CCGGTGTGTA TCCGGGACGC GGTGTCGCAG 
GTGCTGAAGG GCTACGACTG GTCTCTGGTG CCCATGCCGG TGCGGGTGAG CGGCTCCGGG 
AAGAGCAAAC CGCACGTCAA GAGACCCATG AACGCGTTTA TGGTTTGGGC TCAAGCCGCG 
CGGAGGAAAC TGGCGGACCA GTACCCGCAC CTGCACAACG CGGAGCTCAG CAAAACACTC 
GGCAAACTCT GGAGACTGCT GACGGAGAGC GAGAAGAGGC CGTTCGTGGA GGAGGCAGAG 
CGACTGAGGG TTCAGCACAA GAAGGATCAT CCGGATTATA AATACCAGCC CAGGAGACGG 
AAGAGTGTGA AGCCGGGCCA CGCTGAGTCT GAAGCCGGCT CCGAGCTGAT GCAGCACATG 
TATAAAGCGG AGCCGGGAAT GGGTCGACTG ACTGGGTCAC CGGACCACAT CACTGACCAC 
ACAGGTCATA CTCACGGTCC ACCGACTCCT CCAACCACCC CCAAAACAGA GCATCCTCAG 
GCCCCCAAAC AGAACATTGA CTTCAGCAAC GTGGACATCT CCGAGCTCAG CACGGACGTC 
ATCGGCAACT TGACCTTTGA CCTGCAGGAG TTTGACCAGT ACCTGCCTCT GACCCCAGAT 
CAGGGCGCCT GCAGCCGGAG GGCGCCCCCT GCTGGAGCAC ACCTGCACCC ACAGCGAGTG 
CACATAAAGA CGGAGCAGCG GAGCCCGCAG CACTACAGTG AGCACAGCAG CACGCTTTAC 
AGCAGCAGCA GCAGCAGCGC ACAGTGTGAA TACACAGAGC ACAGCTTCTA CAGCCCGTAC 
TCCAGCTACC CGTACCCATA CCCATACCTG CACAGGCCCA TACTCAACAT CCCCGCACCG 
CACAGCTCCT CTGCACACTG GGACCCCCCC GTCTACACCA CTCTGTCCAG ACCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Functional constraints on SoxE proteins in neural crest development: The importance of differential expression for evolution of protein activity.
Developmental biology418(1)166-178(2016 10)
Lee EM,Yuan T,Ballim RD,Nguyen K,Kelsh RN,Medeiros DM,McCauley DW

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.
Nature genetics47(6)625-31(2015 Jun)
Wang Y,Lu Y,Zhang Y,Ning Z,Li Y,Zhao Q,Lu H,Huang R,Xia X,Feng Q,Liang X,Liu K,Zhang L,Lu T,Huang T,Fan D,Weng Q,Zhu C,Lu Y,Li W,Wen Z,Zhou C,Tian Q,Kang X,Shi M,Zhang W,Jang S,Du F,He S,Liao L,Li Y,Gui B,He H,Ning Z,Yang C,He L,Luo L,Yang R,Luo Q,Liu X,Li S,Huang W,Xiao L,Lin H,Han B,Zhu Z

Early depletion of primordial germ cells in zebrafish promotes testis formation.
Stem cell reports4(1)61-73(2015 Jan)
Tzung KW,Goto R,Saju JM,Sreenivasan R,Saito T,Arai K,Yamaha E,Hossain MS,Calvert ME,Orb?n L

Characterization of the trunk neural crest in the bamboo shark, Chiloscyllium punctatum.
The Journal of comparative neurology521(14)3303-20(2013 Oct)
Juarez M,Reyes M,Coleman T,Rotenstein L,Sao S,Martinez D,Jones M,Mackelprang R,De Bellard ME

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sox8b cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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