jade3 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	jade3
Entrez Gene ID	322209
Full Name	jade family PHD finger 3
Synonyms	phf16,wu:fb53c02
General protein information	Preferred Names jade family PHD finger 3 Names protein Jade-3 PHD finger protein 16 jade family PHD finger protein 3
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_201652.2	NP_970614.2	protein Jade-3

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Jade3	NP_955021.1
Pan troglodytes (chimpanzee)	PHF16	XP_003317491.1
Danio rerio (zebrafish)	jade3	NP_970614.1
Xenopus tropicalis (tropical clawed frog)	jade3	NP_001072493.1
Rattus norvegicus (Norway rat)	Jade3	NP_001258194.1
	PHF16	XP_002806255.1
Canis lupus familiaris (dog)	PHF16	XP_538010.1
Gallus gallus (chicken)	PHF16	XP_004938513.1
Homo sapiens (human)	JADE3	NP_001070913.1
Bos taurus (cattle)	PHF16	XP_005228155.1

Gene Ontology
Bibliography

Related articles in PubMed

Efficient identification of CRISPR/Cas9-induced insertions/deletions by direct germline screening in zebrafish.
Brocal I, White RJ, Dooley CM, Carruthers SN, Clark R, Hall A, Busch-Nentwich EM, Stemple DL, Kettleborough RN
BMC genomics17259(2016 Mar)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

A network of epigenetic regulators guides developmental haematopoiesis in vivo.
Huang HT, Kathrein KL, Barton A, Gitlin Z, Huang YH, Ward TP, Hofmann O, Dibiase A, Song A, Tyekucheva S, Hide W, Zhou Y, Zon LI
Nature cell biology15(12)1516-25(2013 Dec)

Recent assembly of an imprinted domain from non-imprinted components.
Rapkins RW, Hore T, Smithwick M, Ager E, Pask AJ, Renfree MB, Kohn M, Hameister H, Nicholls RD, Deakin JE, Graves JA
PLoS genetics2(10)e182(2006 Oct)

The zebrafish gene map defines ancestral vertebrate chromosomes.
Woods IG, Wilson C, Friedlander B, Chang P, Reyes DK, Nix R, Kelly PD, Chu F, Postlethwait JH, Talbot WS
Genome research15(9)1307-14(2005 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following jade3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the jade3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa39701	NM_201652.2 Latest version!	Danio rerio jade family PHD finger 3 (jade3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

jade3 ( NM_201652.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_970614.2 Danio rerio jade family PHD finger 3 (jade3), mRNA.

Price & Availability↑

CloneID	ODa39701
Clone ID Related Accession (Same CDS sequence)	NM_201652.2
Accession Version	NM_201652.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2388bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-23
Organism	Danio rerio(zebrafish)
Product	protein Jade-3
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX322552.6 and BX323016.9. On or before Feb 24, 2016 this sequence version replaced XM_009302509.1, NM_201652.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by partial transcript alignments and orthologous alignments. ##Evidence-Data-START## Transcript exon combination :: BC045468.1, BN000277.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAAACGAC TCAGGACTCC AAGCAGCAGT GACAGTTCAG ACAATGAAAG TCCCTCGACG 
TCCTTTTCCT CTAACAAGTA TGGAAGCAAA CCAGGCACCC CCGCCTCTGC TCAGAAGAAA 
CCAGCAGAGG TGTTCAGAAA AGACCTGATC AGTGCGATGA AGCTGCCAGA CTCTCACCAT 
ATTTCTTCAG AGGATTATTA CCTGTTGGCA GACACATGGA AGCAGGAATG GGAGAAAGGA 
GTGCAAGTGC TGGCCAGTCC AGACACTATC CCTCAGCCCT CTGTGAGAAT AATCACAGAG 
AAGCCAAAGG AAGTGCTCTT CTCCAAACCA AGGAAATATA TTCAGTGCTG GAGTCAGGAC 
TCCACAGAGA CGGGCTACGT CAACATTAAG GAGCTGGCGG AGGCTATGTG CAGATACGAC 
CTGGACGATA TGGATTTGTA CTGGCTCCAG CAGCTCAATG CAGAGCTGGG GATGATGGGT 
GATGGAGTGG TGGATGAACT GACGATGGAG CGGGTGATGG AGGCACTGGA GAGACAGTGT 
CATGAAAACA TGAACCACGC CATCGAGACC GAGGAAGGTT TGGGTATCGA GTATGACGAG 
GACGTCATCT GTGATGTGTG TCGCTCACCT GACAGCGAGG AGGGCAATGA TATGGTGTTT 
TGTGACAAGT GCAACATTTG CGTGCACCAG GCCTGCTATG GCATTGTGAA GGTGCCAGAT 
GGGAACTGGC TGTGCAGAAC GTGTGTGCTT GGCATCACTC CTCAGTGCCT TCTGTGTCCT 
AAAACGGGAG GCGCAATGAA AGCCACCAGA GCTGGCACTA AATGGGCTCA TGTTAGCTGT 
GCCCTCTGGA TACCTGAGGT GAGCATTGCG TGCCCGGAGC GCATGGAGCC CATCACCAAA 
GTGTCTCACA TTCCACCCAG CCGCTGGTCA CTCATCTGCA GTCTCTGTAA ACTCAAGACT 
GGAGCCTGCA TACAGTGTTC GGTTAAGAAC TGCACCATAC CTTTCCACGT CACCTGTGCC 
TTTGAGCACA GCCTGGAGAT GAAGACCATC CTGGATGAAG GTGATGAAGT CAAGTTTAAA 
TCCTACTGCC TAAAGCACAG CAAACCCAAA GCAGGAGAAC CGGGCTTGAG TCCGGCCCGC 
CACAAACCTC CAACCGAGAC TGACAAACTG AGTCTGAGGG CACAGAAGCT TCAGGAGCTG 
GAGGAGGAGT TTTACACGTA TGTCCATCCT GAAGAAGTGG CCCATGACCT CAGCCTGCCG 
CTCCACCTGC TGGATTTCAT CTTTCAATAC TGGAAGATGA AGAGGAAAAG CAACTTCAAC 
AAGGCCCTGC TGCCACCTAA AGAAGATGAG GAGAACCTTC TGCTGCAGCC ACAGGAGGAC 
AGCATTCATA CACGCATGCG CATGTTTATG CACCTGCGCC AGGACCTGGA GAGGGTGAGA 
AACTTGTGCT ACATGGTGAG TCGAAGAGAG AAACTGAAGC TGTCCCAGAG TAAAGCTCAA 
GAACAGATTT TCAATCTACA CGTTAAGCTT GTCAACCAAG AGTTGTCTGC AGGGCTTCCT 
GTGTCCTCTT CAATAGAGAA CCTACTTTTC CACCCTCCTC CCAGAATAAC CTTAAAACTC 
AAAATGCCCA AAGTACAGCT CGGTAACGGC AAAAGCAGCT CCAAATCCGG TAATGGACCC 
TTATGCCCGG ATAACAGCTG CAACCTTTAT GACACTAGTG AAGGAGGGAT CGGTCAGGGC 
AAACCGCAGC TCCATCTCGG AAGACAACGA ATAGAGGAGC GAATCAACGG TATCCTACCC 
GCCTCCATAT ACATCCGACG AGATGGCGGG ACGCCACCGT TAGCGGTAAA ACAATCAGGC 
AAACCATTAG CTCTGCACGC CGCCCTTCAC GGTCAGTCAT CCAACGGGAA GACCAAAAAT 
GAAGCGGAAA AAACGCGGCA AATTAAATCC AACGGCATTC TAGACAAACC CATTCTCCAA 
AGAGACACTT CCTGCCTGGC GGCCAGCGAG AAAGACCCCC GCAGTGAGAT TTCAGGGAAA 
AGTCAGCCAT CGGGATTCCA CAAAACCTCT CTTGAGCACT TCAGTCGATC TCTCAAGGAG 
GCCACTGTGA GTTTAGTACG GACCGAGGAC CTTCGGACCT TTGAAAAGAA CTCACGCAAG 
TCCTCCGGAT TCTCAAAACC TCTTTCCACC GAGCGGCCGC AAGGGGGCGG CAGAGCGTCT 
CAGGAAAGCG ATGGTTACTG TCCGGATGCA GAGCTCAGTG ATTCTGAACC CGAAGCCAAA 
GGGAAGTGCA GGCAAGGAGG AAGGACTCAA AACCAGAGAG GAGATTATGT CAAGTCTGCC 
AGTCGAGCAA AACACTCTTA TGGCTCTAGG ACATCGGTGC AAAGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_970614.2
CDS	214..2601
Translation	MKRLRTPSSSDSSDNESPSTSFSSNKYGSKPGTPASAQKKPAEVFRKDLISAMKLPDSHHISSEDYYLLADTWKQEWEKGVQVLASPDTIPQPSVRIITEKPKEVLFSKPRKYIQCWSQDSTETGYVNIKELAEAMCRYDLDDMDLYWLQQLNAELGMMGDGVVDELTMERVMEALERQCHENMNHAIETEEGLGIEYDEDVICDVCRSPDSEEGNDMVFCDKCNICVHQACYGIVKVPDGNWLCRTCVLGITPQCLLCPKTGGAMKATRAGTKWAHVSCALWIPEVSIACPERMEPITKVSHIPPSRWSLICSLCKLKTGACIQCSVKNCTIPFHVTCAFEHSLEMKTILDEGDEVKFKSYCLKHSKPKAGEPGLSPARHKPPTETDKLSLRAQKLQELEEEFYTYVHPEEVAHDLSLPLHLLDFIFQYWKMKRKSNFNKALLPPKEDEENLLLQPQEDSIHTRMRMFMHLRQDLERVRNLCYMVSRREKLKLSQSKAQEQIFNLHVKLVNQELSAGLPVSSSIENLLFHPPPRITLKLKMPKVQLGNGKSSSKSGNGPLCPDNSCNLYDTSEGGIGQGKPQLHLGRQRIEERINGILPASIYIRRDGGTPPLAVKQSGKPLALHAALHGQSSNGKTKNEAEKTRQIKSNGILDKPILQRDTSCLAASEKDPRSEISGKSQPSGFHKTSLEHFSRSLKEATVSLVRTEDLRTFEKNSRKSSGFSKPLSTERPQGGGRASQESDGYCPDAELSDSEPEAKGKCRQGGRTQNQRGDYVKSASRAKHSYGSRTSVQR

Target ORF information:

RefSeq Version	NM_201652.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio jade family PHD finger 3 (jade3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_201652.2

ORF Insert Sequence:

ATGAAACGAC TCAGGACTCC AAGCAGCAGT GACAGTTCAG ACAATGAAAG TCCCTCGACG 
TCCTTTTCCT CTAACAAGTA TGGAAGCAAA CCAGGCACCC CCGCCTCTGC TCAGAAGAAA 
CCAGCAGAGG TGTTCAGAAA AGACCTGATC AGTGCGATGA AGCTGCCAGA CTCTCACCAT 
ATTTCTTCAG AGGATTATTA CCTGTTGGCA GACACATGGA AGCAGGAATG GGAGAAAGGA 
GTGCAAGTGC TGGCCAGTCC AGACACTATC CCTCAGCCCT CTGTGAGAAT AATCACAGAG 
AAGCCAAAGG AAGTGCTCTT CTCCAAACCA AGGAAATATA TTCAGTGCTG GAGTCAGGAC 
TCCACAGAGA CGGGCTACGT CAACATTAAG GAGCTGGCGG AGGCTATGTG CAGATACGAC 
CTGGACGATA TGGATTTGTA CTGGCTCCAG CAGCTCAATG CAGAGCTGGG GATGATGGGT 
GATGGAGTGG TGGATGAACT GACGATGGAG CGGGTGATGG AGGCACTGGA GAGACAGTGT 
CATGAAAACA TGAACCACGC CATCGAGACC GAGGAAGGTT TGGGTATCGA GTATGACGAG 
GACGTCATCT GTGATGTGTG TCGCTCACCT GACAGCGAGG AGGGCAATGA TATGGTGTTT 
TGTGACAAGT GCAACATTTG CGTGCACCAG GCCTGCTATG GCATTGTGAA GGTGCCAGAT 
GGGAACTGGC TGTGCAGAAC GTGTGTGCTT GGCATCACTC CTCAGTGCCT TCTGTGTCCT 
AAAACGGGAG GCGCAATGAA AGCCACCAGA GCTGGCACTA AATGGGCTCA TGTTAGCTGT 
GCCCTCTGGA TACCTGAGGT GAGCATTGCG TGCCCGGAGC GCATGGAGCC CATCACCAAA 
GTGTCTCACA TTCCACCCAG CCGCTGGTCA CTCATCTGCA GTCTCTGTAA ACTCAAGACT 
GGAGCCTGCA TACAGTGTTC GGTTAAGAAC TGCACCATAC CTTTCCACGT CACCTGTGCC 
TTTGAGCACA GCCTGGAGAT GAAGACCATC CTGGATGAAG GTGATGAAGT CAAGTTTAAA 
TCCTACTGCC TAAAGCACAG CAAACCCAAA GCAGGAGAAC CGGGCTTGAG TCCGGCCCGC 
CACAAACCTC CAACCGAGAC TGACAAACTG AGTCTGAGGG CACAGAAGCT TCAGGAGCTG 
GAGGAGGAGT TTTACACGTA TGTCCATCCT GAAGAAGTGG CCCATGACCT CAGCCTGCCG 
CTCCACCTGC TGGATTTCAT CTTTCAATAC TGGAAGATGA AGAGGAAAAG CAACTTCAAC 
AAGGCCCTGC TGCCACCTAA AGAAGATGAG GAGAACCTTC TGCTGCAGCC ACAGGAGGAC 
AGCATTCATA CACGCATGCG CATGTTTATG CACCTGCGCC AGGACCTGGA GAGGGTGAGA 
AACTTGTGCT ACATGGTGAG TCGAAGAGAG AAACTGAAGC TGTCCCAGAG TAAAGCTCAA 
GAACAGATTT TCAATCTACA CGTTAAGCTT GTCAACCAAG AGTTGTCTGC AGGGCTTCCT 
GTGTCCTCTT CAATAGAGAA CCTACTTTTC CACCCTCCTC CCAGAATAAC CTTAAAACTC 
AAAATGCCCA AAGTACAGCT CGGTAACGGC AAAAGCAGCT CCAAATCCGG TAATGGACCC 
TTATGCCCGG ATAACAGCTG CAACCTTTAT GACACTAGTG AAGGAGGGAT CGGTCAGGGC 
AAACCGCAGC TCCATCTCGG AAGACAACGA ATAGAGGAGC GAATCAACGG TATCCTACCC 
GCCTCCATAT ACATCCGACG AGATGGCGGG ACGCCACCGT TAGCGGTAAA ACAATCAGGC 
AAACCATTAG CTCTGCACGC CGCCCTTCAC GGTCAGTCAT CCAACGGGAA GACCAAAAAT 
GAAGCGGAAA AAACGCGGCA AATTAAATCC AACGGCATTC TAGACAAACC CATTCTCCAA 
AGAGACACTT CCTGCCTGGC GGCCAGCGAG AAAGACCCCC GCAGTGAGAT TTCAGGGAAA 
AGTCAGCCAT CGGGATTCCA CAAAACCTCT CTTGAGCACT TCAGTCGATC TCTCAAGGAG 
GCCACTGTGA GTTTAGTACG GACCGAGGAC CTTCGGACCT TTGAAAAGAA CTCACGCAAG 
TCCTCCGGAT TCTCAAAACC TCTTTCCACC GAGCGGCCGC AAGGGGGCGG CAGAGCGTCT 
CAGGAAAGCG ATGGTTACTG TCCGGATGCA GAGCTCAGTG ATTCTGAACC CGAAGCCAAA 
GGGAAGTGCA GGCAAGGAGG AAGGACTCAA AACCAGAGAG GAGATTATGT CAAGTCTGCC 
AGTCGAGCAA AACACTCTTA TGGCTCTAGG ACATCGGTGC AAAGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Efficient identification of CRISPR/Cas9-induced insertions/deletions by direct germline screening in zebrafish.
BMC genomics17259(2016 Mar)
Brocal I,White RJ,Dooley CM,Carruthers SN,Clark R,Hall A,Busch-Nentwich EM,Stemple DL,Kettleborough RN

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

A network of epigenetic regulators guides developmental haematopoiesis in vivo.
Nature cell biology15(12)1516-25(2013 Dec)
Huang HT,Kathrein KL,Barton A,Gitlin Z,Huang YH,Ward TP,Hofmann O,Dibiase A,Song A,Tyekucheva S,Hide W,Zhou Y,Zon LI

Recent assembly of an imprinted domain from non-imprinted components.
PLoS genetics2(10)e182(2006 Oct)
Rapkins RW,Hore T,Smithwick M,Ager E,Pask AJ,Renfree MB,Kohn M,Hameister H,Nicholls RD,Deakin JE,Graves JA

The zebrafish gene map defines ancestral vertebrate chromosomes.
Genome research15(9)1307-14(2005 Sep)
Woods IG,Wilson C,Friedlander B,Chang P,Reyes DK,Nix R,Kelly PD,Chu F,Postlethwait JH,Talbot WS

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jade3 cDNA ORF clone, Danio rerio(zebrafish)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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