usp1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	usp1
Entrez Gene ID	322007
Full Name	ubiquitin specific peptidase 1
Synonyms	wu:fb43a02,zgc:55962
General protein information	Preferred Names ubiquitin specific peptidase 1 Names ubiquitin carboxyl-terminal hydrolase 1 ubiquitin specific protease 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_199579.1	NP_955873.1	ubiquitin carboxyl-terminal hydrolase 1

Pathways from BioSystems

Homologies

Homo sapiens (human)	USP1	NP_003359.3
	USP1	XP_001085998.2
Canis lupus familiaris (dog)	USP1	XP_005620277.1
Pan troglodytes (chimpanzee)	USP1	XP_003949480.1
Mus musculus (house mouse)	Usp1	NP_666256.2
Rattus norvegicus (Norway rat)	Usp1	NP_001015015.1
Bos taurus (cattle)	USP1	NP_001039689.1
Danio rerio (zebrafish)	usp1	NP_955873.1
Gallus gallus (chicken)	USP1	NP_001026461.1
Xenopus tropicalis (tropical clawed frog)	usp1	NP_001072581.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Cadm4 restricts the production of cardiac outflow tract progenitor cells.
Zeng XX, Yelon D
Cell reports7(4)951-60(2014 May)

New classes of mind bomb-interacting proteins identified from yeast two-hybrid screens.
Tseng LC, Zhang C, Cheng CM, Xu H, Hsu CH, Jiang YJ
PloS one9(4)e93394(2014)

Genome-wide loss-of-function analysis of deubiquitylating enzymes for zebrafish development.
Tse WK, Eisenhaber B, Ho SH, Ng Q, Eisenhaber F, Jiang YJ
BMC genomics10637(2009 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following usp1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the usp1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa02964	NM_199579.1 Latest version!	Danio rerio ubiquitin specific peptidase 1 (usp1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

usp1 ( NM_199579.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_955873.1 Danio rerio ubiquitin specific peptidase 1 (usp1), mRNA.

Price & Availability↑

CloneID	ODa02964
Clone ID Related Accession (Same CDS sequence)	NM_199579.1
Accession Version	NM_199579.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2319bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	ubiquitin carboxyl-terminal hydrolase 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045507.1. ##Evidence-Data-START## Transcript exon combination :: BC045507.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGCCCGGGC TGCACAGTGA AAGTGGAGTG GTGGCTGCAG CTGGCAGTCC TGTGAAGAAA 
AGCAAACTCT CATTGAAGTT CTTTCAGAAG AAGGAAACCA AACGCGCTCT GGACTTCTCA 
GAGGCCCCGC CAGAAGACAA CAGTAACGTT ACCACTGAGC CGCAAGAGAC TATTTGTCAT 
GACCAGGTTG TGCCATTGCC CTGCCCTTCG TCTCCTCTTA CCTGCGAGAA GCGCGAGAGC 
CTGGTCCCCT TCGTTGGGCT TAATAATTTG GGGAACACCT GCTACTTGAA TAGCATCCTT 
CAGGTTCTAT ATTACTGTCC TGGTTTTAAA GAAGCCATCA AGTCCTTGTG TCATGTGGCT 
AAACTGAAAG ACAAACCGCA AGAAGAGGGT GTCAACAATG AGGGGGACTC TGGTGAGAAC 
ACCCTACCTG TTCCCATGGA GCTGTTGGGC AGTTTCCACA GCCTCATTTC CTCTGTGGAG 
CAGCTGCAGT CCAGCTTCCT GCTTAACCCA GAAAAATACA ATGATGGAGA GCTAGCCACA 
CCACCTCGTA AACTGCTTAA TGCGCTCAGG CAGCTCAACC CAATGTATGA GGGTTACTTG 
CAGCATGACG CACAAGAGGT CCTGCAGTGC ATTCTTGTGA ACATTCAGGA GGCCTGTGAC 
ACTATCAAAA AAGAGCAAAC GGACAACCAG GACACCACAA TGATCAATGG AACCGAGTCT 
GTCCAGGATG GTGAAGGGAG CTCTGACAGC CAGCTGAGTG GAAAGAGAAA GAGTGACACA 
GAAGCAGGCA ATGCTAAGAA GAAACCAAAA TCTCAAAGCA AGTCTAAGAA AAATGAAGAA 
AACGTGCCTA TGACCCGCTC GAAACGCAAG TCCTCCAGTG AAATAAGCAC AGAGAATTCA 
GCTACTGAGC AGAGGAATGG CACAGAAGAG CAAGAGAAGG ATAGCACCAC AGAAGAAGAG 
AAGAATGACA GTCCACCTAA AGATACAGGC AAGAGGACTA GGAGAGGGAA GCTGGGCTGG 
TTGAGGCCAT CAGGGAAGCA GCCTAGCATC TTCTCCAAGT TTCGCAGCAT GGGACGAATT 
ACTTCACATG TAGGAGCAAA AGGAGAGACC AAGGAGAAGT CAGATTGTAG TTCTCAGGAG 
AAACAGGACA AGGACAACTC TGAGAATGAA AACAAAACTC ATGAAGTTAA ACAGGATCTG 
GGAAAGAATG AAGAGCAATC AGGCCTGGAT GTGCTGAAGT GGATGTTTCA GGGTCAGCTG 
GTGTTGCGGA CACGTTGTCT GGAATGTGAG TGTTTCACAG AGAGAAGAGA GGATTTTCAA 
GACATCAGTG TGCCTGTGCA AGAAGACGAA ACCCTCTCTT CTGACTCTAG TTCTGAGATT 
TCTCCAGATC CCAAGACTGA GCTGAAAACT CTAAAGTGGG CCATATCTCA GTTTGCATCT 
GTTGAGCGTA TTGTGGGCCA AGATAAATAT TTCTGTGAGA CCTGTCATCA CTACACAGAA 
GCTGAGAGAA GTCTCCTGTT TGACAAAACG CCAGAAGTCA TCACAATCCA TCTAAAGTGC 
TTTGCTGCCA ATGGCTCAGA GATGGACCCT TATGCTGGCC TTTCTAAGGT GAACACTCCT 
CTGCAGACTC CTCTGAAACT TTCCCTGCAT GAGTGGTGCA CTCAGCCTGA CTCTCCAGAC 
TATGAGCTCT TCGCCGTGGT CATGCATAGT GGAGTGACCA TCAGCAGCGG TCACTACACC 
ACCTACATCC GCATGATGGA TCTCCATCAC ACCAACATCA AGCCTCAGAC TCAGGATGAA 
GAGCATGACC GAGACCAAGA AGAAGACATG AAACAGAAGA AAGAGGAAAC TTCTCAAACC 
GACTATGATG ATGGCGAGGT GTCCTTCAGC TTGTCTGGCA GAGGGCGAAA TGTGGCCAGA 
ACCAGCGGAA CTAATAACAT GTCCAGCAAA ACGGCAGGCA AGAGGTGCTC TGAAGGTGTT 
GGCCTTTTAG GAGGACAAAG GAGCATCACC AGCTATGAAC TCAGCAACAG CAAGCAAAAC 
AATCCAGACA AGCCATCCAG CTTGTCCAGT CGTGCTCTCC TTCAGAACGC TGTAAAGAAA 
GAGCCAGAGG AAGACTGCGC TGATGCTGTG GCAGACGGGA CACAGGTCAG TTTTGACCTC 
GCTCTCAGAA ATCTTCTGGA CTTTGAAGGA AAGTGGATGC TGTTTGATGA CTCTGAAGTT 
AGACTCTATG AAGAAGAGGA CTTCCTCCGT GCTTGTTCTC CAGAGACGTG CTCCACCTCT 
ACACCATACC TGCTCTTCTA CAAGAGAGTC TCTCAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_955873.1
CDS	106..2424
Translation	MPGLHSESGVVAAAGSPVKKSKLSLKFFQKKETKRALDFSEAPPEDNSNVTTEPQETICHDQVVPLPCPSSPLTCEKRESLVPFVGLNNLGNTCYLNSILQVLYYCPGFKEAIKSLCHVAKLKDKPQEEGVNNEGDSGENTLPVPMELLGSFHSLISSVEQLQSSFLLNPEKYNDGELATPPRKLLNALRQLNPMYEGYLQHDAQEVLQCILVNIQEACDTIKKEQTDNQDTTMINGTESVQDGEGSSDSQLSGKRKSDTEAGNAKKKPKSQSKSKKNEENVPMTRSKRKSSSEISTENSATEQRNGTEEQEKDSTTEEEKNDSPPKDTGKRTRRGKLGWLRPSGKQPSIFSKFRSMGRITSHVGAKGETKEKSDCSSQEKQDKDNSENENKTHEVKQDLGKNEEQSGLDVLKWMFQGQLVLRTRCLECECFTERREDFQDISVPVQEDETLSSDSSSEISPDPKTELKTLKWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPEVITIHLKCFAANGSEMDPYAGLSKVNTPLQTPLKLSLHEWCTQPDSPDYELFAVVMHSGVTISSGHYTTYIRMMDLHHTNIKPQTQDEEHDRDQEEDMKQKKEETSQTDYDDGEVSFSLSGRGRNVARTSGTNNMSSKTAGKRCSEGVGLLGGQRSITSYELSNSKQNNPDKPSSLSSRALLQNAVKKEPEEDCADAVADGTQVSFDLALRNLLDFEGKWMLFDDSEVRLYEEEDFLRACSPETCSTSTPYLLFYKRVSQ

Target ORF information:

RefSeq Version	NM_199579.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio ubiquitin specific peptidase 1 (usp1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199579.1

ORF Insert Sequence:

ATGCCCGGGC TGCACAGTGA AAGTGGAGTG GTGGCTGCAG CTGGCAGTCC TGTGAAGAAA 
AGCAAACTCT CATTGAAGTT CTTTCAGAAG AAGGAAACCA AACGCGCTCT GGACTTCTCA 
GAGGCCCCGC CAGAAGACAA CAGTAACGTT ACCACTGAGC CGCAAGAGAC TATTTGTCAT 
GACCAGGTTG TGCCATTGCC CTGCCCTTCG TCTCCTCTTA CCTGCGAGAA GCGCGAGAGC 
CTGGTCCCCT TCGTTGGGCT TAATAATTTG GGGAACACCT GCTACTTGAA TAGCATCCTT 
CAGGTTCTAT ATTACTGTCC TGGTTTTAAA GAAGCCATCA AGTCCTTGTG TCATGTGGCT 
AAACTGAAAG ACAAACCGCA AGAAGAGGGT GTCAACAATG AGGGGGACTC TGGTGAGAAC 
ACCCTACCTG TTCCCATGGA GCTGTTGGGC AGTTTCCACA GCCTCATTTC CTCTGTGGAG 
CAGCTGCAGT CCAGCTTCCT GCTTAACCCA GAAAAATACA ATGATGGAGA GCTAGCCACA 
CCACCTCGTA AACTGCTTAA TGCGCTCAGG CAGCTCAACC CAATGTATGA GGGTTACTTG 
CAGCATGACG CACAAGAGGT CCTGCAGTGC ATTCTTGTGA ACATTCAGGA GGCCTGTGAC 
ACTATCAAAA AAGAGCAAAC GGACAACCAG GACACCACAA TGATCAATGG AACCGAGTCT 
GTCCAGGATG GTGAAGGGAG CTCTGACAGC CAGCTGAGTG GAAAGAGAAA GAGTGACACA 
GAAGCAGGCA ATGCTAAGAA GAAACCAAAA TCTCAAAGCA AGTCTAAGAA AAATGAAGAA 
AACGTGCCTA TGACCCGCTC GAAACGCAAG TCCTCCAGTG AAATAAGCAC AGAGAATTCA 
GCTACTGAGC AGAGGAATGG CACAGAAGAG CAAGAGAAGG ATAGCACCAC AGAAGAAGAG 
AAGAATGACA GTCCACCTAA AGATACAGGC AAGAGGACTA GGAGAGGGAA GCTGGGCTGG 
TTGAGGCCAT CAGGGAAGCA GCCTAGCATC TTCTCCAAGT TTCGCAGCAT GGGACGAATT 
ACTTCACATG TAGGAGCAAA AGGAGAGACC AAGGAGAAGT CAGATTGTAG TTCTCAGGAG 
AAACAGGACA AGGACAACTC TGAGAATGAA AACAAAACTC ATGAAGTTAA ACAGGATCTG 
GGAAAGAATG AAGAGCAATC AGGCCTGGAT GTGCTGAAGT GGATGTTTCA GGGTCAGCTG 
GTGTTGCGGA CACGTTGTCT GGAATGTGAG TGTTTCACAG AGAGAAGAGA GGATTTTCAA 
GACATCAGTG TGCCTGTGCA AGAAGACGAA ACCCTCTCTT CTGACTCTAG TTCTGAGATT 
TCTCCAGATC CCAAGACTGA GCTGAAAACT CTAAAGTGGG CCATATCTCA GTTTGCATCT 
GTTGAGCGTA TTGTGGGCCA AGATAAATAT TTCTGTGAGA CCTGTCATCA CTACACAGAA 
GCTGAGAGAA GTCTCCTGTT TGACAAAACG CCAGAAGTCA TCACAATCCA TCTAAAGTGC 
TTTGCTGCCA ATGGCTCAGA GATGGACCCT TATGCTGGCC TTTCTAAGGT GAACACTCCT 
CTGCAGACTC CTCTGAAACT TTCCCTGCAT GAGTGGTGCA CTCAGCCTGA CTCTCCAGAC 
TATGAGCTCT TCGCCGTGGT CATGCATAGT GGAGTGACCA TCAGCAGCGG TCACTACACC 
ACCTACATCC GCATGATGGA TCTCCATCAC ACCAACATCA AGCCTCAGAC TCAGGATGAA 
GAGCATGACC GAGACCAAGA AGAAGACATG AAACAGAAGA AAGAGGAAAC TTCTCAAACC 
GACTATGATG ATGGCGAGGT GTCCTTCAGC TTGTCTGGCA GAGGGCGAAA TGTGGCCAGA 
ACCAGCGGAA CTAATAACAT GTCCAGCAAA ACGGCAGGCA AGAGGTGCTC TGAAGGTGTT 
GGCCTTTTAG GAGGACAAAG GAGCATCACC AGCTATGAAC TCAGCAACAG CAAGCAAAAC 
AATCCAGACA AGCCATCCAG CTTGTCCAGT CGTGCTCTCC TTCAGAACGC TGTAAAGAAA 
GAGCCAGAGG AAGACTGCGC TGATGCTGTG GCAGACGGGA CACAGGTCAG TTTTGACCTC 
GCTCTCAGAA ATCTTCTGGA CTTTGAAGGA AAGTGGATGC TGTTTGATGA CTCTGAAGTT 
AGACTCTATG AAGAAGAGGA CTTCCTCCGT GCTTGTTCTC CAGAGACGTG CTCCACCTCT 
ACACCATACC TGCTCTTCTA CAAGAGAGTC TCTCAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Cadm4 restricts the production of cardiac outflow tract progenitor cells.
Cell reports7(4)951-60(2014 May)
Zeng XX,Yelon D

New classes of mind bomb-interacting proteins identified from yeast two-hybrid screens.
PloS one9(4)e93394(2014)
Tseng LC,Zhang C,Cheng CM,Xu H,Hsu CH,Jiang YJ

Genome-wide loss-of-function analysis of deubiquitylating enzymes for zebrafish development.
BMC genomics10637(2009 Dec)
Tse WK,Eisenhaber B,Ho SH,Ng Q,Eisenhaber F,Jiang YJ