ORF » Species Summary » Danio rerio » hoxc5a cDNA ORF clone

hoxc5a cDNA ORF clone, Danio rerio(zebrafish)

The following hoxc5a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hoxc5a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa39217 NM_131144.2
Latest version!		 Danio rerio homeobox C5a (hoxc5a), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
ODa151424 XM_021469726.1
Latest version!		 Danio rerio homeobox C5a (hoxc5a), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $104.30
$149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    hoxc5a ( NM_131144.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_571219.2 Danio rerio homeobox C5a (hoxc5a), mRNA.
    Price & Availability↑
    CloneID ODa39217
    Clone ID Related Accession (Same CDS sequence) NM_131144.2
    Accession Version NM_131144.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 702bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-09-24
    Organism Danio rerio(zebrafish)
    Product homeobox protein Hox-C5a
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX005254.9. On Aug 27, 2015 this sequence version replaced NM_131144.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC163205.1, GFIL01012817.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGAGCTCAT ACGTTGGGAA GTCTTTTTCT AAGCAGACGC AAGACGCCTC CTCTTGTAGA 
    ATGCACACTT TTGACAACTA TGGAGCTCAC AGTGAGTTCC ACGAGTCCAA TTACGCGTAC 
    GAAGGGCTTG ATCTCGGCGG ATCCTTCAGT TCTCAAATCC CCACCAACTC TTTGAGGCGG 
    GAGGCGATAA ACACAACCGA CCGTGCAAGG AGCAGTGCAG CAGTTCAGCG AACACAGTCT 
    TGTTCAGCTC TGGGCTCTCG TAGCTTTGTA AGCACTCACG GGTACAACCC CCTCAGTCAC 
    GGACTGTTGA GCCAAAAAGC CGAGGGGAAT ATGGAAGTTA TGGAGAAGCC CAGCGGCAAG 
    AGCCGCACAG ACGATATCAA AATGGAGACT ACTTCAGCGA TAAAGCAACA AACTAATTCG 
    ACTCAGCGTC AGAACCAGTC GCAGCCGCAG ATATATCCGT GGATGACAAA GCTACACATG 
    AGCCACGAAT CTGACGGTAA AAGGTCACGA ACCAGTTACA CCCGGTACCA GACTCTGGAG 
    TTGGAGAAAG AGTTCCATTT CAACCGATAC CTCACACGTC GCAGACGTAT TGAGATTGCC 
    AATAACCTCT GCTTGAACGA GCGCCAAATT AAAATATGGT TCCAGAACCG TCGCATGAAG 
    TGGAAGAAGG ACTCAAAGTT GAAAGTAAAA GGAGGACTAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_571219.2
    CDS65..766
    Translation

    Target ORF information:

    RefSeq Version NM_131144.2
    Organism Danio rerio(zebrafish)
    Definition Danio rerio homeobox C5a (hoxc5a), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_131144.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGAGCTCAT ACGTTGGGAA GTCTTTTTCT AAGCAGACGC AAGACGCCTC CTCTTGTAGA 
    ATGCACACTT TTGACAACTA TGGAGCTCAC AGTGAGTTCC ACGAGTCCAA TTACGCGTAC 
    GAAGGGCTTG ATCTCGGCGG ATCCTTCAGT TCTCAAATCC CCACCAACTC TTTGAGGCGG 
    GAGGCGATAA ACACAACCGA CCGTGCAAGG AGCAGTGCAG CAGTTCAGCG AACACAGTCT 
    TGTTCAGCTC TGGGCTCTCG TAGCTTTGTA AGCACTCACG GGTACAACCC CCTCAGTCAC 
    GGACTGTTGA GCCAAAAAGC CGAGGGGAAT ATGGAAGTTA TGGAGAAGCC CAGCGGCAAG 
    AGCCGCACAG ACGATATCAA AATGGAGACT ACTTCAGCGA TAAAGCAACA AACTAATTCG 
    ACTCAGCGTC AGAACCAGTC GCAGCCGCAG ATATATCCGT GGATGACAAA GCTACACATG 
    AGCCACGAAT CTGACGGTAA AAGGTCACGA ACCAGTTACA CCCGGTACCA GACTCTGGAG 
    TTGGAGAAAG AGTTCCATTT CAACCGATAC CTCACACGTC GCAGACGTAT TGAGATTGCC 
    AATAACCTCT GCTTGAACGA GCGCCAAATT AAAATATGGT TCCAGAACCG TCGCATGAAG 
    TGGAAGAAGG ACTCAAAGTT GAAAGTAAAA GGAGGACTAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    hoxc5a ( XM_021469726.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021325401.1 Danio rerio homeobox C5a (hoxc5a), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODa151424
    Clone ID Related Accession (Same CDS sequence) XM_021469726.1
    Accession Version XM_021469726.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 507bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product homeobox protein Hox-C5a isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAGCTCAT ACGTTGGGAA GTCTTTTTCT AAGCAGACGC AAGACGCCTC CTCTTGTAGA 
    ATGCACACTT TTGACAACTA TGGAGCTCAC AGTGAGTTCC ACGAGTCCAA TTACGCGTAC 
    GAAGGGCTTG ATCTCGGCGG ATCCTTCAGT TCTCAAATCC CCACCAACTC TTTGAGGCGG 
    GAGGCGATAA ACACAACCGA CCGTGCAAGG AGCAGTGCAG CAGTTCAGCG AACACAGTCT 
    TGTTCAGCTC TGGGCTCTCG TAGCTTTGTA AGCACTCACG GGTACAACCC CCTCAGTCAC 
    GGACTGTTGA GCCAAAAAGC CGAGGGGAAT ATGGAAGTTA TGGAGAAGCC CAGCGGCAAG 
    AGCCGCACAG ACGATATCAA AATGGAGACT ACTTCAGCGA TAAAGCAACA AACTAATTCG 
    ACTCAGCGTC AGAACCAGTC GCAGCCGCAG ATATATCCGT GGATGACAAA GCTACACATG 
    AGCCACGGTA ACCCAGTATC TTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021325401.1
    CDS340..846
    Translation

    Target ORF information:

    RefSeq Version XM_021469726.1
    Organism Danio rerio(zebrafish)
    Definition Danio rerio homeobox C5a (hoxc5a), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021469726.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAGCTCAT ACGTTGGGAA GTCTTTTTCT AAGCAGACGC AAGACGCCTC CTCTTGTAGA 
    ATGCACACTT TTGACAACTA TGGAGCTCAC AGTGAGTTCC ACGAGTCCAA TTACGCGTAC 
    GAAGGGCTTG ATCTCGGCGG ATCCTTCAGT TCTCAAATCC CCACCAACTC TTTGAGGCGG 
    GAGGCGATAA ACACAACCGA CCGTGCAAGG AGCAGTGCAG CAGTTCAGCG AACACAGTCT 
    TGTTCAGCTC TGGGCTCTCG TAGCTTTGTA AGCACTCACG GGTACAACCC CCTCAGTCAC 
    GGACTGTTGA GCCAAAAAGC CGAGGGGAAT ATGGAAGTTA TGGAGAAGCC CAGCGGCAAG 
    AGCCGCACAG ACGATATCAA AATGGAGACT ACTTCAGCGA TAAAGCAACA AACTAATTCG 
    ACTCAGCGTC AGAACCAGTC GCAGCCGCAG ATATATCCGT GGATGACAAA GCTACACATG 
    AGCCACGGTA ACCCAGTATC TTTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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