ccl44 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ccl44
Entrez Gene ID	100141480
Full Name	chemokine (C-C motif) ligand 44
Synonyms	ccl-c11b
General protein information	Preferred Names chemokine (C-C motif) ligand 44 Names chemokine (C-C motif) ligand 44 CCL-chr11b Dr11_WGA839_1_233313 chemokine CCL-C11b
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009305799.2	XP_009304074.1	chemokine (C-C motif) ligand 44 isoform X1
XM_009305799.3	XP_009304074.1	chemokine (C-C motif) ligand 44 isoform X1
NM_001115102.1	NP_001108574.1	chemokine (C-C motif) ligand 44 precursor

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Injury-induced ctgfa directs glial bridging and spinal cord regeneration in zebrafish.
Mokalled MH, Patra C, Dickson AL, Endo T, Stainier DY, Poss KD
Science (New York, N.Y.)354(6312)630-634(2016 11)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX.
Nomiyama H, Hieshima K, Osada N, Kato-Unoki Y, Otsuka-Ono K, Takegawa S, Izawa T, Yoshizawa A, Kikuchi Y, Tanase S, Miura R, Kusuda J, Nakao M, Yoshie O
BMC genomics9222(2008 May)

CC chemokines in zebrafish: evidence for extensive intrachromosomal gene duplications.
Peatman E, Liu Z
Genomics88(3)381-5(2006 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ccl44 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ccl44 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa37049	NM_001115102.1 Latest version!	Danio rerio chemokine (C-C motif) ligand 44 (ccl44), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa48540	XM_009305799.3 Latest version!	Danio rerio chemokine (C-C motif) ligand 44 (ccl44), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
View Old Accession Versions >>
ODa48540	XM_009305799.2	Danio rerio chemokine (C-C motif) ligand 44 (ccl44), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ccl44 ( NM_001115102.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001108574.1 Danio rerio chemokine (C-C motif) ligand 44 (ccl44), mRNA.

Price & Availability↑

CloneID	ODa37049
Clone ID Related Accession (Same CDS sequence)	NM_001115102.1
Accession Version	NM_001115102.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 381bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	chemokine (C-C motif) ligand 44 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB331768.1. ##Evidence-Data-START## Transcript exon combination :: AB331768.1, BI475311.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END##

ATGTTCCTGC AGACTGTCTC CATCCTCTTC CTCTCGGCCG TCCTCTTCGG CTGCCTGGAA 
GGGAAGGGTG TGCAAATGCA GCGAGATGTT CAGTGCTGCA TGCAGTACTC TCACGGAAAA 
GTCCGGACCA AAGATGTCCT GAGGTATGAG AGGCAGACGG AGGGGCCGGA TTGCAGCATA 
AGAGCCATCA TATTGTACAC CAAAAAGGCA GTGAAGTGCG CTGATCCGAG GGACAGGAAG 
GTGAAGAGGT TACTACGGAA ACTGAACCAG AGGCTGGGAG CCAAAGCCCG CAGGACCATG 
TGGTTACATC CACATTTGAA TCTGCCTGTT ATGTCGGAGG TCGCTGTTGT GAATTCCCAA 
AAGATGAACA AGACCAAGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001108574.1
CDS	17..397
Translation	MFLQTVSILFLSAVLFGCLEGKGVQMQRDVQCCMQYSHGKVRTKDVLRYERQTEGPDCSIRAIILYTKKAVKCADPRDRKVKRLLRKLNQRLGAKARRTMWLHPHLNLPVMSEVAVVNSQKMNKTK

Target ORF information:

RefSeq Version	NM_001115102.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio chemokine (C-C motif) ligand 44 (ccl44), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001115102.1

ORF Insert Sequence:

ATGTTCCTGC AGACTGTCTC CATCCTCTTC CTCTCGGCCG TCCTCTTCGG CTGCCTGGAA 
GGGAAGGGTG TGCAAATGCA GCGAGATGTT CAGTGCTGCA TGCAGTACTC TCACGGAAAA 
GTCCGGACCA AAGATGTCCT GAGGTATGAG AGGCAGACGG AGGGGCCGGA TTGCAGCATA 
AGAGCCATCA TATTGTACAC CAAAAAGGCA GTGAAGTGCG CTGATCCGAG GGACAGGAAG 
GTGAAGAGGT TACTACGGAA ACTGAACCAG AGGCTGGGAG CCAAAGCCCG CAGGACCATG 
TGGTTACATC CACATTTGAA TCTGCCTGTT ATGTCGGAGG TCGCTGTTGT GAATTCCCAA 
AAGATGAACA AGACCAAGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ccl44 ( XM_009305799.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009304074.1 Danio rerio chemokine (C-C motif) ligand 44 (ccl44), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa48540
Clone ID Related Accession (Same CDS sequence)	XM_009305799.2 , XM_009305799.3
Accession Version	XM_009305799.2	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 354bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	chemokine (C-C motif) ligand 44 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009305799.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTGGAGT TTCACGCATG TCAGAGGATA CGAGGGAAGG GTGTGCAAAT GCAGCGAGAT 
GTTCAGTGCT GCATGCAGTA CTCTCACGGA AAAGTCCGGA CCAAAGATGT CCTGAGGTAT 
GAGAGGCAGA CGGAGGGGCC GGATTGCAGC ATAAGAGCCA TCATATTGTA CACCAAAAAG 
GCAGTGAAGT GCGCTGATCC GAGGGACAGG AAGGTGAAGA GGTTACTACG GAAACTGAAC 
CAGAGGCTGG GAGCCAAAGC GCGCAGGACC ATGTGGTTAC ATCCACATTT GAATCTGCCT 
GTTATGTCGG AGGTCGCTGT TGTGAATTCC CAAAAGATGA ACAAGACCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009304074.1
CDS	122..475
Translation	MLEFHACQRIRGKGVQMQRDVQCCMQYSHGKVRTKDVLRYERQTEGPDCSIRAIILYTKKAVKCADPRDRKVKRLLRKLNQRLGAKARRTMWLHPHLNLPVMSEVAVVNSQKMNKTK

Target ORF information:

RefSeq Version	XM_009305799.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio chemokine (C-C motif) ligand 44 (ccl44), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009305799.2

ORF Insert Sequence:

ATGCTGGAGT TTCACGCATG TCAGAGGATA CGAGGGAAGG GTGTGCAAAT GCAGCGAGAT 
GTTCAGTGCT GCATGCAGTA CTCTCACGGA AAAGTCCGGA CCAAAGATGT CCTGAGGTAT 
GAGAGGCAGA CGGAGGGGCC GGATTGCAGC ATAAGAGCCA TCATATTGTA CACCAAAAAG 
GCAGTGAAGT GCGCTGATCC GAGGGACAGG AAGGTGAAGA GGTTACTACG GAAACTGAAC 
CAGAGGCTGG GAGCCAAAGC GCGCAGGACC ATGTGGTTAC ATCCACATTT GAATCTGCCT 
GTTATGTCGG AGGTCGCTGT TGTGAATTCC CAAAAGATGA ACAAGACCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ccl44 ( XM_009305799.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009304074.1 Danio rerio chemokine (C-C motif) ligand 44 (ccl44), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa48540
Clone ID Related Accession (Same CDS sequence)	XM_009305799.2 , XM_009305799.3
Accession Version	XM_009305799.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 354bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	chemokine (C-C motif) ligand 44 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009305799.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTGGAGT TTCACGCATG TCAGAGGATA CGAGGGAAGG GTGTGCAAAT GCAGCGAGAT 
GTTCAGTGCT GCATGCAGTA CTCTCACGGA AAAGTCCGGA CCAAAGATGT CCTGAGGTAT 
GAGAGGCAGA CGGAGGGGCC GGATTGCAGC ATAAGAGCCA TCATATTGTA CACCAAAAAG 
GCAGTGAAGT GCGCTGATCC GAGGGACAGG AAGGTGAAGA GGTTACTACG GAAACTGAAC 
CAGAGGCTGG GAGCCAAAGC GCGCAGGACC ATGTGGTTAC ATCCACATTT GAATCTGCCT 
GTTATGTCGG AGGTCGCTGT TGTGAATTCC CAAAAGATGA ACAAGACCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009304074.1
CDS	122..475
Translation	MLEFHACQRIRGKGVQMQRDVQCCMQYSHGKVRTKDVLRYERQTEGPDCSIRAIILYTKKAVKCADPRDRKVKRLLRKLNQRLGAKARRTMWLHPHLNLPVMSEVAVVNSQKMNKTK

Target ORF information:

RefSeq Version	XM_009305799.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio chemokine (C-C motif) ligand 44 (ccl44), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009305799.3

ORF Insert Sequence:

ATGCTGGAGT TTCACGCATG TCAGAGGATA CGAGGGAAGG GTGTGCAAAT GCAGCGAGAT 
GTTCAGTGCT GCATGCAGTA CTCTCACGGA AAAGTCCGGA CCAAAGATGT CCTGAGGTAT 
GAGAGGCAGA CGGAGGGGCC GGATTGCAGC ATAAGAGCCA TCATATTGTA CACCAAAAAG 
GCAGTGAAGT GCGCTGATCC GAGGGACAGG AAGGTGAAGA GGTTACTACG GAAACTGAAC 
CAGAGGCTGG GAGCCAAAGC GCGCAGGACC ATGTGGTTAC ATCCACATTT GAATCTGCCT 
GTTATGTCGG AGGTCGCTGT TGTGAATTCC CAAAAGATGA ACAAGACCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Injury-induced ctgfa directs glial bridging and spinal cord regeneration in zebrafish.
Science (New York, N.Y.)354(6312)630-634(2016 11)
Mokalled MH,Patra C,Dickson AL,Endo T,Stainier DY,Poss KD

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX.
BMC genomics9222(2008 May)
Nomiyama H,Hieshima K,Osada N,Kato-Unoki Y,Otsuka-Ono K,Takegawa S,Izawa T,Yoshizawa A,Kikuchi Y,Tanase S,Miura R,Kusuda J,Nakao M,Yoshie O

CC chemokines in zebrafish: evidence for extensive intrachromosomal gene duplications.
Genomics88(3)381-5(2006 Sep)
Peatman E,Liu Z

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ccl44 cDNA ORF clone, Danio rerio(zebrafish)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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