ccl33.2 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ccl33.2
Entrez Gene ID	100000741
Full Name	chemokine (C-C motif) ligand 33, duplicate 2
Synonyms	si:ch211-149o7.6
General protein information	Preferred Names chemokine (C-C motif) ligand 33, duplicate 2 Names uncharacterized protein LOC100000741 CCL-chr25h CCL33ab chemokine CCL-CUe dr-chr25-CCL8-35.6%-EP41974b
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001128278.1	NP_001121750.1	uncharacterized protein LOC100000741
XM_017354031.1	XP_017209520.1	uncharacterized protein LOC100000741 isoform X1
XM_021470423.1	XP_021326098.1	uncharacterized protein LOC100000741 isoform X1
NM_001128278.2	NP_001121750.2	uncharacterized protein LOC100000741

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history.
Nomiyama H, Osada N, Yoshie O
Genes to cells : devoted to molecular & cellular mechanisms18(1)1-16(2013 Jan)

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX.
Nomiyama H, Hieshima K, Osada N, Kato-Unoki Y, Otsuka-Ono K, Takegawa S, Izawa T, Yoshizawa A, Kikuchi Y, Tanase S, Miura R, Kusuda J, Nakao M, Yoshie O
BMC genomics9222(2008 May)

Defining the origins and evolution of the chemokine/chemokine receptor system.
DeVries ME, Kelvin AA, Xu L, Ran L, Robinson J, Kelvin DJ
Journal of immunology (Baltimore, Md. : 1950)176(1)401-15(2006 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ccl33.2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ccl33.2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa04651	NM_001128278.1 Latest version!	Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
ODa141293	NM_001128278.2 Latest version!	Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa141293	XM_021470423.1 Latest version!	Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$104.30 $149.00
ODa57776	XM_017354031.1 Latest version!	Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$104.30 $149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ccl33.2 ( NM_001128278.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001121750.1 Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), mRNA.

Price & Availability↑

CloneID	ODa04651
Clone ID Related Accession (Same CDS sequence)	NM_001128278.1
Accession Version	NM_001128278.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 333bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-09-22
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC100000741
Comment	Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AB331778.1. ##Evidence-Data-START## Transcript exon combination :: AB331778.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA3505383, SAMEA4476728 [ECO:0000350] ##Evidence-Data-END##

ATGAGCAGTC CGCCCTGCCC ATGGATGTCC ACCACAACTA CCCTTGCCCC TGCCACCACC 
GCCATCACCA CGAGAGCCAA AACCACCACC TTGCCAAAAC CTAAACGACA AATTGACAGA 
AGTTCCATTC CTGGCCCTGC AGCAGTCCCT ATAACCTGTT GCTTTGCCTT CATTGACTTT 
CCAATACCAT ACAACAAAAT TGTAAGTGCT TTGAGGACAA GTCCCCGCTG TGCTACTAAA 
GCCATTGTGG TTACGACTCC TAGAACCCAG TTTTGTGTGA AACCAAATGA AGTATGGATA 
AAGGCTGTAA TGAAAAAACA GCTTCAGAAA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001121750.1
CDS	16..348
Translation	MSSPPCPWMSTTTTLAPATTAITTRAKTTTLPKPKRQIDRSSIPGPAAVPITCCFAFIDFPIPYNKIVSALRTSPRCATKAIVVTTPRTQFCVKPNEVWIKAVMKKQLQK

Target ORF information:

RefSeq Version	NM_001128278.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001128278.1

ORF Insert Sequence:

ATGAGCAGTC CGCCCTGCCC ATGGATGTCC ACCACAACTA CCCTTGCCCC TGCCACCACC 
GCCATCACCA CGAGAGCCAA AACCACCACC TTGCCAAAAC CTAAACGACA AATTGACAGA 
AGTTCCATTC CTGGCCCTGC AGCAGTCCCT ATAACCTGTT GCTTTGCCTT CATTGACTTT 
CCAATACCAT ACAACAAAAT TGTAAGTGCT TTGAGGACAA GTCCCCGCTG TGCTACTAAA 
GCCATTGTGG TTACGACTCC TAGAACCCAG TTTTGTGTGA AACCAAATGA AGTATGGATA 
AAGGCTGTAA TGAAAAAACA GCTTCAGAAA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ccl33.2 ( NM_001128278.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001121750.2 Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), mRNA.

Price & Availability↑

CloneID	ODa141293
Clone ID Related Accession (Same CDS sequence)	XM_021470423.1 , NM_001128278.2
Accession Version	NM_001128278.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 357bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-10-07
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC100000741
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX005103.5. On or before Oct 8, 2019 this sequence version replaced XM_021470423.1, NM_001128278.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AB331778.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA3505383, SAMEA4476728 [ECO:0000350] ##Evidence-Data-END##

ATGACTGAAT CAGCAACCCT CCCCTCATCA ACCACACCAG CCTTATCTGT GAGCCAGAAA 
ATGAGCAGTC CGCCCTGCCC ATGGATGTCC ACCACAACTA CCCTTGCCCC TGCCACCACC 
GCCATCACCA CGAGAGCCAA AACCACCACC TTGCCAAAAC CTAAACGACA AATTGACAGA 
AGTTCCATTC CTGGCCCTGC AGCAGTTCCT ATAACCTGTT GCTTTGCCTT CATTGACTTT 
CCAATACCAT ACAACAAAAT TGTAAGTGCT TTGAGGACAA GTCCCCGCTG TGCTACTAAA 
GCCATTGTGG TTACGACTCC TAGAACCCAG TTTTGTGTGA AACCAAATGA AGTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001121750.2
CDS	100..456
Translation	MTESATLPSSTTPALSVSQKMSSPPCPWMSTTTTLAPATTAITTRAKTTTLPKPKRQIDRSSIPGPAAVPITCCFAFIDFPIPYNKIVSALRTSPRCATKAIVVTTPRTQFCVKPNEV

Target ORF information:

RefSeq Version	NM_001128278.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001128278.2

ORF Insert Sequence:

ATGACTGAAT CAGCAACCCT CCCCTCATCA ACCACACCAG CCTTATCTGT GAGCCAGAAA 
ATGAGCAGTC CGCCCTGCCC ATGGATGTCC ACCACAACTA CCCTTGCCCC TGCCACCACC 
GCCATCACCA CGAGAGCCAA AACCACCACC TTGCCAAAAC CTAAACGACA AATTGACAGA 
AGTTCCATTC CTGGCCCTGC AGCAGTTCCT ATAACCTGTT GCTTTGCCTT CATTGACTTT 
CCAATACCAT ACAACAAAAT TGTAAGTGCT TTGAGGACAA GTCCCCGCTG TGCTACTAAA 
GCCATTGTGG TTACGACTCC TAGAACCCAG TTTTGTGTGA AACCAAATGA AGTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ccl33.2 ( XM_021470423.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021326098.1 Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa141293
Clone ID Related Accession (Same CDS sequence)	XM_021470423.1 , NM_001128278.2
Accession Version	XM_021470423.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 357bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-14
Organism	Danio rerio(zebrafish)
Product	uncharacterized protein LOC100000741 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007136.7) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACTGAAT CAGCAACCCT CCCCTCATCA ACCACACCAG CCTTATCTGT GAGCCAGAAA 
ATGAGCAGTC CGCCCTGCCC ATGGATGTCC ACCACAACTA CCCTTGCCCC TGCCACCACC 
GCCATCACCA CGAGAGCCAA AACCACCACC TTGCCAAAAC CTAAACGACA AATTGACAGA 
AGTTCCATTC CTGGCCCTGC AGCAGTTCCT ATAACCTGTT GCTTTGCCTT CATTGACTTT 
CCAATACCAT ACAACAAAAT TGTAAGTGCT TTGAGGACAA GTCCCCGCTG TGCTACTAAA 
GCCATTGTGG TTACGACTCC TAGAACCCAG TTTTGTGTGA AACCAAATGA AGTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021326098.1
CDS	100..456
Translation	MTESATLPSSTTPALSVSQKMSSPPCPWMSTTTTLAPATTAITTRAKTTTLPKPKRQIDRSSIPGPAAVPITCCFAFIDFPIPYNKIVSALRTSPRCATKAIVVTTPRTQFCVKPNEV

Target ORF information:

RefSeq Version	XM_021470423.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021470423.1

ORF Insert Sequence:

ATGACTGAAT CAGCAACCCT CCCCTCATCA ACCACACCAG CCTTATCTGT GAGCCAGAAA 
ATGAGCAGTC CGCCCTGCCC ATGGATGTCC ACCACAACTA CCCTTGCCCC TGCCACCACC 
GCCATCACCA CGAGAGCCAA AACCACCACC TTGCCAAAAC CTAAACGACA AATTGACAGA 
AGTTCCATTC CTGGCCCTGC AGCAGTTCCT ATAACCTGTT GCTTTGCCTT CATTGACTTT 
CCAATACCAT ACAACAAAAT TGTAAGTGCT TTGAGGACAA GTCCCCGCTG TGCTACTAAA 
GCCATTGTGG TTACGACTCC TAGAACCCAG TTTTGTGTGA AACCAAATGA AGTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ccl33.2 ( XM_017354031.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_017209520.1 Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa57776
Clone ID Related Accession (Same CDS sequence)	XM_017354031.1
Accession Version	XM_017354031.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 297bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-06-23
Organism	Danio rerio(Zebrafish)
Product	uncharacterized protein LOC100000741 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007136.6) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAGCAGTC CGCCCTGCCC ATGGATGTCC ACCACAACTA CCCTTGCCCC TGCCACCACC 
GCCATCACCA CGAGAGCCAA AACCACCACC TTGCCAAAAC CTAAACGACA AATTGACAGA 
AGTTCCATTC CTGGCCCTGC AGCAGTTCCT ATAACCTGTT GCTTTGCCTT CATTGACTTT 
CCAATACCAT ACAACAAAAT TGTAAGTGCT TTGAGGACAA GTCCCCGCTG TGCTACTAAA 
GCCATTGTGG TTACGACTCC TAGAACCCAG TTTTGTGTGA AACCAAATGA AGTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017209520.1
CDS	10..306
Translation	MSSPPCPWMSTTTTLAPATTAITTRAKTTTLPKPKRQIDRSSIPGPAAVPITCCFAFIDFPIPYNKIVSALRTSPRCATKAIVVTTPRTQFCVKPNEV

Target ORF information:

RefSeq Version	XM_017354031.1
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio chemokine (C-C motif) ligand 33, duplicate 2 (ccl33.2), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017354031.1

ORF Insert Sequence:

ATGAGCAGTC CGCCCTGCCC ATGGATGTCC ACCACAACTA CCCTTGCCCC TGCCACCACC 
GCCATCACCA CGAGAGCCAA AACCACCACC TTGCCAAAAC CTAAACGACA AATTGACAGA 
AGTTCCATTC CTGGCCCTGC AGCAGTTCCT ATAACCTGTT GCTTTGCCTT CATTGACTTT 
CCAATACCAT ACAACAAAAT TGTAAGTGCT TTGAGGACAA GTCCCCGCTG TGCTACTAAA 
GCCATTGTGG TTACGACTCC TAGAACCCAG TTTTGTGTGA AACCAAATGA AGTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history.
Genes to cells : devoted to molecular & cellular mechanisms18(1)1-16(2013 Jan)
Nomiyama H,Osada N,Yoshie O

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX.
BMC genomics9222(2008 May)
Nomiyama H,Hieshima K,Osada N,Kato-Unoki Y,Otsuka-Ono K,Takegawa S,Izawa T,Yoshizawa A,Kikuchi Y,Tanase S,Miura R,Kusuda J,Nakao M,Yoshie O

Defining the origins and evolution of the chemokine/chemokine receptor system.
Journal of immunology (Baltimore, Md. : 1950)176(1)401-15(2006 Jan)
DeVries ME,Kelvin AA,Xu L,Ran L,Robinson J,Kelvin DJ

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ccl33.2 cDNA ORF clone, Danio rerio(zebrafish)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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