LOC107100466 cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107100466
Entrez Gene ID	107100466
Full Name	red-sensitive opsin
Gene Type	protein-coding
Organism	Cyprinodon variegatus(sheepshead minnow)

mRNA and Protein(s)

mRNA	Protein	Name
XM_015398975.1	XP_015254461.1	red-sensitive opsin

Pathways from BioSystems
Gene Ontology

The following LOC107100466 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107100466 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCy02784	XM_015398975.1 Latest version!	Cyprinodon variegatus red-sensitive opsin (LOC107100466), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107100466 ( XM_015398975.1 ) cDNA ORF clone, Cyprinodon variegatus(sheepshead minnow) -> XP_015254461.1 Cyprinodon variegatus red-sensitive opsin (LOC107100466), mRNA.

Price & Availability↑

CloneID	OCy02784
Clone ID Related Accession (Same CDS sequence)	XM_015398975.1
Accession Version	XM_015398975.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1074bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-01-13
Organism	Cyprinodon variegatus(sheepshead minnow)
Product	red-sensitive opsin
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015150482.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cyprinodon variegatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGAGC AATGGGGTGC ACAGGTGTTT GCTGCGAGGC GGCACAATGA AGATACAACG 
AGGGGCTCTG CATTCACGTA CACAAACAGC AATCATACCA GAGATCCTTT TGAGGGACCA 
AACTACCATA TCGCTCCTCG GTGGGTTTAC AACGTTGCTA CAGTATGGAT GTTTTTTGTG 
GTCGTTCTAT CAGTCTTCAC CAACGGCCTC GTTTTGGTGG CCACTGCAAA GTTCAAGAAA 
CTCCGTCATC CCCTTAACTG GATTCTTGTC AACCTTGCTA TTGCTGATCT TGGAGAGACG 
GTCTTTGCCA GCACCATCAG CGTGTGTAAT CAGTTTTTTG GATATTTCAT TCTGGGACAC 
CCAATGTGTG TCTTTGAAGG CTATATCGTC TCAACTTGTG GTATTGCTGC TCTTTGGTCC 
CTTACTATCA TCTCTTGGGA GAGATGGATA GTTGTGTGCA AACCTTTTGG AAACGTCAAG 
TTTGATGCCA AATGGGCCAT AGGTGGAATT GTGTTCTCCT GGGTCTGGTC TGCTGTGTGG 
TGTGCTCCTC CCATCTTTGG ATGGAGCAGG TATTGGCCCC ATGGACTGAA GACATCCTGT 
GGACCTGATG TGTTCAGTGG AAGTGAGGAC CCTGGAGTTC AGTCCTACAT GATTGTTCTT 
ATGATTACAT GCTGCATCAT TCCTCTGGCC ATCATAATCT TATGCTACCT GGCCGTGTGG 
TTGGCCATTC GTGCTGTTGC TATGCAGCAG AAGGAATCTG AGTCAACCCA GAAGGCTGAG 
AGGGAAGTAT CCAGGATGGT CGTTGTGATG ATCCTGGCTT ACTGTGTCTG CTGGGGACCT 
TACACCTTTT TCGCCTGCTT TGCTGCAGCC AACCCTGGTT ATTCTTTCCA TCCTTTGGCT 
GCTGCAATGC CTGCATACTT TGCCAAGAGT GCCACCATCT ACAACCCAGT TATCTATGTC 
TTCATGAACC GACAGTTCCG CACATGCATC ATGCAGCTCT TTGGAAAACA GGTGGATGAT 
GGTTCTGAAG TGTCCACATC AAAGACAGAA GTGTCCTCTG TGGCTCCGGC ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_015254461.1
CDS	1..1074
Translation	MAEQWGAQVFAARRHNEDTTRGSAFTYTNSNHTRDPFEGPNYHIAPRWVYNVATVWMFFVVVLSVFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETVFASTISVCNQFFGYFILGHPMCVFEGYIVSTCGIAALWSLTIISWERWIVVCKPFGNVKFDAKWAIGGIVFSWVWSAVWCAPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMIVLMITCCIIPLAIIILCYLAVWLAIRAVAMQQKESESTQKAEREVSRMVVVMILAYCVCWGPYTFFACFAAANPGYSFHPLAAAMPAYFAKSATIYNPVIYVFMNRQFRTCIMQLFGKQVDDGSEVSTSKTEVSSVAPA

Target ORF information:

RefSeq Version	XM_015398975.1
Organism	Cyprinodon variegatus(sheepshead minnow)
Definition	Cyprinodon variegatus red-sensitive opsin (LOC107100466), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_015398975.1

ORF Insert Sequence:

ATGGCAGAGC AATGGGGTGC ACAGGTGTTT GCTGCGAGGC GGCACAATGA AGATACAACG 
AGGGGCTCTG CATTCACGTA CACAAACAGC AATCATACCA GAGATCCTTT TGAGGGACCA 
AACTACCATA TCGCTCCTCG GTGGGTTTAC AACGTTGCTA CAGTATGGAT GTTTTTTGTG 
GTCGTTCTAT CAGTCTTCAC CAACGGCCTC GTTTTGGTGG CCACTGCAAA GTTCAAGAAA 
CTCCGTCATC CCCTTAACTG GATTCTTGTC AACCTTGCTA TTGCTGATCT TGGAGAGACG 
GTCTTTGCCA GCACCATCAG CGTGTGTAAT CAGTTTTTTG GATATTTCAT TCTGGGACAC 
CCAATGTGTG TCTTTGAAGG CTATATCGTC TCAACTTGTG GTATTGCTGC TCTTTGGTCC 
CTTACTATCA TCTCTTGGGA GAGATGGATA GTTGTGTGCA AACCTTTTGG AAACGTCAAG 
TTTGATGCCA AATGGGCCAT AGGTGGAATT GTGTTCTCCT GGGTCTGGTC TGCTGTGTGG 
TGTGCTCCTC CCATCTTTGG ATGGAGCAGG TATTGGCCCC ATGGACTGAA GACATCCTGT 
GGACCTGATG TGTTCAGTGG AAGTGAGGAC CCTGGAGTTC AGTCCTACAT GATTGTTCTT 
ATGATTACAT GCTGCATCAT TCCTCTGGCC ATCATAATCT TATGCTACCT GGCCGTGTGG 
TTGGCCATTC GTGCTGTTGC TATGCAGCAG AAGGAATCTG AGTCAACCCA GAAGGCTGAG 
AGGGAAGTAT CCAGGATGGT CGTTGTGATG ATCCTGGCTT ACTGTGTCTG CTGGGGACCT 
TACACCTTTT TCGCCTGCTT TGCTGCAGCC AACCCTGGTT ATTCTTTCCA TCCTTTGGCT 
GCTGCAATGC CTGCATACTT TGCCAAGAGT GCCACCATCT ACAACCCAGT TATCTATGTC 
TTCATGAACC GACAGTTCCG CACATGCATC ATGCAGCTCT TTGGAAAACA GGTGGATGAT 
GGTTCTGAAG TGTCCACATC AAAGACAGAA GTGTCCTCTG TGGCTCCGGC ATAA