ikk-epsilon cDNA ORF clone, Ciona intestinalis(vase tunicate)

Gene
Clones
gRNAs

Summary

Gene Symbol	ikk-epsilon
Entrez Gene ID	780713
Full Name	IkappaB kinase
Gene Type	protein-coding
Organism	Ciona intestinalis(vase tunicate)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001078566.2	NP_001072034.1	IkappaB kinase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: towards a comprehensive understanding of gene networks.
Imai KS, Hino K, Yagi K, Satoh N, Satou Y
Development (Cambridge, England)131(16)4047-58(2004 Aug)

Genomewide surveys of developmentally relevant genes in Ciona intestinalis.
Satou Y, Satoh N
Development genes and evolution213(5-6)211-2(2003 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ikk-epsilon gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ikk-epsilon cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCi00015	NM_001078566.2 Latest version!	Ciona intestinalis IkappaB kinase (ikk-epsilon), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ikk-epsilon ( NM_001078566.2 ) cDNA ORF clone, Ciona intestinalis(vase tunicate) -> NP_001072034.1 Ciona intestinalis IkappaB kinase (ikk-epsilon), mRNA.

Price & Availability↑

CloneID	OCi00015
Clone ID Related Accession (Same CDS sequence)	NM_001078566.2
Accession Version	NM_001078566.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2394bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-03
Organism	Ciona intestinalis(vase tunicate)
Product	IkappaB kinase
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB210503.1. On Aug 31, 2012 this sequence version replaced NM_001078566.1. ##Evidence-Data-START## Transcript exon combination :: AB210503.1 [ECO:0000332] ##Evidence-Data-END##

ATGAACCCCC ATCCTGCCCA CAACTCTTCT CCCATTAGAA GCACCCTCAA CTATGTGTGG 
TCGACCACTG AGATATTGGG GCAGGGGGCG ACAGGATTTG TGTTCAAAGG CCGGGAGAAG 
AAAACTGGGC AGGAGTATGC CATCAAGGTA TTCAATTCTC TCAACTACAT GGCTCGCAGT 
CTTGAAGCAC GACGAAGGGA ATTTGAAGTT TTAAGAAAAG TTGATCATAA GAATGTTGTG 
AGACTTTTCA GTGTGGAAGA AGAGTTGACA ACAAAGCACG ATGTAATAAT TATGGAGTTA 
TGTCCCAACG GTAGTTTGTA CTCCATGCTG GATGATCCTG AAAATCTCTA TGGACTACCC 
GAGTCGGAAT TCCATCGTGT GTTAAGCCAT ATAACTGCTG GTATGAAACA CCTTCACGAC 
AAAGGTATCG TACACAGAGA CCTTAAACCT GGTAATATCA TGCGTTCCCT CGATGACGAT 
GGAACGGCCG TGTACAAACT TACGGACTTT GGGGCAGCGA GAGAACTGGG AGATGATGAG 
CAGTTCATGT CGCTTTATGG AACAGAGGAA TATTTGCACC CAGACATATA CGAGAGAGCT 
GTTCTAAGAA AACATGCGGG TAAAATGTTT TCCGCAACTG TTGACCTTTG GAGTTTGGGA 
GTTACTCTAT ACCATGTTGC TACCGGCATG CTCCCATTTC GTCCTTATGG TGGCGCTAGA 
CGTAACAAAG ACGTGATGTA TAGGATTACA ACAGAAAAAC CAAGTGGTGT AATATCTGGG 
GTCCAACATT CAGAAAGGGG AAGTATTGAA TGGAGTCGAG AACTGCCCAA GACGTGCCGA 
CTGTCACATG GCTTTAAGAA AATTTTCACG GTTGTGCTTT CCGGTATCCT TGAATGCAAC 
CCCCACAAAA TTTGGACGTT TGATCGTTAC TTCGCTGAAG TAGAAGACAT CCTGAGCAAA 
AAAGTAATCA ACGTATTTAG CGTGCCCAAC GCCATGCTAC ATAAGGTTTA CATCAGTCCA 
GAAAAAACCT TGGTTTCATT CCAAGAGGCG GTGGCTGAAC TGACAGAAGT TCGCTCCAGC 
AAACAACTTC TTCTGTTCGA TGGGGAACAA TTTGAGATGG AGCAATTCGT TGCCGTTAAG 
AGTTACCCCC ATACAACCCC TGAACACCCT CTTATCTTGT TCAGTTCTGA TATCAATGAT 
TTCCAAGCGA TAACTATACC TCACACATGC AAACCTCCAA AGGTGAAACC TTCGCTCTCA 
CTTGATAATG ACTCAAGTTT AGCGAAAGTT TGTTCGAGTA CGTTGTTTGA TATTCGAAAG 
TCAGTCAGTT ACCTGCTGCT TGTGCAAATC CTTATTCGTC TCAGTGTAAA GTGGTTTGTA 
TGTTATTTAA AATCTCGTGT TGTCAAATTA AAACTTCTCC GAAGCAATCT CCAATGCAAA 
GTAGATTGTC TGCGTACTGC ACTGGAAATA TTTGAAGAAC ATTACCAGCG AGAGACATCT 
TTACTGACAG TGATCACAAA TTTAGTGACC AGCCCTCCCG AGGTCAATGA ACTTAAGTTA 
TATTTCACTC AAATCACAGA GAAGGCGAAA ATTTTAAGAC AGATCCGCAC GGAATTTGAT 
CAGCTCAATG AATCTACGAA TCAGTTTGAT AAACTGATCA TCCAAGAAGA GATCCCAAGC 
TCCATCTTCG TGGATGAGGG ATCGCAAACC AACGACCGCC TCGAAGAGCG GATGAAAGTT 
GCTTCTGAAA AATCGAGAGA GATTAGCCGA CTTTTTAAAA CACACAAAAA AATCAGAAGA 
TTATCGCATA GTGATGATCA ACTCCATAAG TTTGAAAAAC AACGACTCGC AGAAGTCTGT 
GAAGCTTCTG TCACTCTTTT CACCGATAAA AGCGTCCCTG GGTGTAAACG GTTGCACAAA 
GAATCGATTA ATTGGTTCAG TAATATGAAT GAGTACCAGA AGAAGTTATG GAATTGTGAG 
ACTCGTATCA TGAGATTGAG TGACAGGTGT CAAGAACAGG AAGAATCCAT TCGTACGTTA 
CAACGAGTAT ATCGAGACAA ATTATCATTA GTTGAGTCAA TTTTAAAAGA AAATGCAAAA 
CCTTTATCAG CAGCATCGCT ACCTGGCCCC AACCTTAATG TTGTCCAGCC TAGTATAGCA 
GTTCCTTCAT CATGGCCTAA CTCCATTGAC AATCCCCGGT CTTCCCGGCA AAGGCAATTG 
AAACAGCTTC GCCAAGGTTT AATTGAGGCC AAAAACAGCC TCAATGAAGT CAGATGCGAA 
GTACAAACTG GTTCTGAAAT TTTAAAAAAA CTCAGTTCAT TAACAGCAAA CCGAAACTGT 
GCTTCCCCTG AAACACCTTC CAGACCATGC GTGCCAATGA GAACTAATGA TTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001072034.1
CDS	136..2529
Translation	MNPHPAHNSSPIRSTLNYVWSTTEILGQGATGFVFKGREKKTGQEYAIKVFNSLNYMARSLEARRREFEVLRKVDHKNVVRLFSVEEELTTKHDVIIMELCPNGSLYSMLDDPENLYGLPESEFHRVLSHITAGMKHLHDKGIVHRDLKPGNIMRSLDDDGTAVYKLTDFGAARELGDDEQFMSLYGTEEYLHPDIYERAVLRKHAGKMFSATVDLWSLGVTLYHVATGMLPFRPYGGARRNKDVMYRITTEKPSGVISGVQHSERGSIEWSRELPKTCRLSHGFKKIFTVVLSGILECNPHKIWTFDRYFAEVEDILSKKVINVFSVPNAMLHKVYISPEKTLVSFQEAVAELTEVRSSKQLLLFDGEQFEMEQFVAVKSYPHTTPEHPLILFSSDINDFQAITIPHTCKPPKVKPSLSLDNDSSLAKVCSSTLFDIRKSVSYLLLVQILIRLSVKWFVCYLKSRVVKLKLLRSNLQCKVDCLRTALEIFEEHYQRETSLLTVITNLVTSPPEVNELKLYFTQITEKAKILRQIRTEFDQLNESTNQFDKLIIQEEIPSSIFVDEGSQTNDRLEERMKVASEKSREISRLFKTHKKIRRLSHSDDQLHKFEKQRLAEVCEASVTLFTDKSVPGCKRLHKESINWFSNMNEYQKKLWNCETRIMRLSDRCQEQEESIRTLQRVYRDKLSLVESILKENAKPLSAASLPGPNLNVVQPSIAVPSSWPNSIDNPRSSRQRQLKQLRQGLIEAKNSLNEVRCEVQTGSEILKKLSSLTANRNCASPETPSRPCVPMRTND

Target ORF information:

RefSeq Version	NM_001078566.2
Organism	Ciona intestinalis(vase tunicate)
Definition	Ciona intestinalis IkappaB kinase (ikk-epsilon), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001078566.2

ORF Insert Sequence:

ATGAACCCCC ATCCTGCCCA CAACTCTTCT CCCATTAGAA GCACCCTCAA CTATGTGTGG 
TCGACCACTG AGATATTGGG GCAGGGGGCG ACAGGATTTG TGTTCAAAGG CCGGGAGAAG 
AAAACTGGGC AGGAGTATGC CATCAAGGTA TTCAATTCTC TCAACTACAT GGCTCGCAGT 
CTTGAAGCAC GACGAAGGGA ATTTGAAGTT TTAAGAAAAG TTGATCATAA GAATGTTGTG 
AGACTTTTCA GTGTGGAAGA AGAGTTGACA ACAAAGCACG ATGTAATAAT TATGGAGTTA 
TGTCCCAACG GTAGTTTGTA CTCCATGCTG GATGATCCTG AAAATCTCTA TGGACTACCC 
GAGTCGGAAT TCCATCGTGT GTTAAGCCAT ATAACTGCTG GTATGAAACA CCTTCACGAC 
AAAGGTATCG TACACAGAGA CCTTAAACCT GGTAATATCA TGCGTTCCCT CGATGACGAT 
GGAACGGCCG TGTACAAACT TACGGACTTT GGGGCAGCGA GAGAACTGGG AGATGATGAG 
CAGTTCATGT CGCTTTATGG AACAGAGGAA TATTTGCACC CAGACATATA CGAGAGAGCT 
GTTCTAAGAA AACATGCGGG TAAAATGTTT TCCGCAACTG TTGACCTTTG GAGTTTGGGA 
GTTACTCTAT ACCATGTTGC TACCGGCATG CTCCCATTTC GTCCTTATGG TGGCGCTAGA 
CGTAACAAAG ACGTGATGTA TAGGATTACA ACAGAAAAAC CAAGTGGTGT AATATCTGGG 
GTCCAACATT CAGAAAGGGG AAGTATTGAA TGGAGTCGAG AACTGCCCAA GACGTGCCGA 
CTGTCACATG GCTTTAAGAA AATTTTCACG GTTGTGCTTT CCGGTATCCT TGAATGCAAC 
CCCCACAAAA TTTGGACGTT TGATCGTTAC TTCGCTGAAG TAGAAGACAT CCTGAGCAAA 
AAAGTAATCA ACGTATTTAG CGTGCCCAAC GCCATGCTAC ATAAGGTTTA CATCAGTCCA 
GAAAAAACCT TGGTTTCATT CCAAGAGGCG GTGGCTGAAC TGACAGAAGT TCGCTCCAGC 
AAACAACTTC TTCTGTTCGA TGGGGAACAA TTTGAGATGG AGCAATTCGT TGCCGTTAAG 
AGTTACCCCC ATACAACCCC TGAACACCCT CTTATCTTGT TCAGTTCTGA TATCAATGAT 
TTCCAAGCGA TAACTATACC TCACACATGC AAACCTCCAA AGGTGAAACC TTCGCTCTCA 
CTTGATAATG ACTCAAGTTT AGCGAAAGTT TGTTCGAGTA CGTTGTTTGA TATTCGAAAG 
TCAGTCAGTT ACCTGCTGCT TGTGCAAATC CTTATTCGTC TCAGTGTAAA GTGGTTTGTA 
TGTTATTTAA AATCTCGTGT TGTCAAATTA AAACTTCTCC GAAGCAATCT CCAATGCAAA 
GTAGATTGTC TGCGTACTGC ACTGGAAATA TTTGAAGAAC ATTACCAGCG AGAGACATCT 
TTACTGACAG TGATCACAAA TTTAGTGACC AGCCCTCCCG AGGTCAATGA ACTTAAGTTA 
TATTTCACTC AAATCACAGA GAAGGCGAAA ATTTTAAGAC AGATCCGCAC GGAATTTGAT 
CAGCTCAATG AATCTACGAA TCAGTTTGAT AAACTGATCA TCCAAGAAGA GATCCCAAGC 
TCCATCTTCG TGGATGAGGG ATCGCAAACC AACGACCGCC TCGAAGAGCG GATGAAAGTT 
GCTTCTGAAA AATCGAGAGA GATTAGCCGA CTTTTTAAAA CACACAAAAA AATCAGAAGA 
TTATCGCATA GTGATGATCA ACTCCATAAG TTTGAAAAAC AACGACTCGC AGAAGTCTGT 
GAAGCTTCTG TCACTCTTTT CACCGATAAA AGCGTCCCTG GGTGTAAACG GTTGCACAAA 
GAATCGATTA ATTGGTTCAG TAATATGAAT GAGTACCAGA AGAAGTTATG GAATTGTGAG 
ACTCGTATCA TGAGATTGAG TGACAGGTGT CAAGAACAGG AAGAATCCAT TCGTACGTTA 
CAACGAGTAT ATCGAGACAA ATTATCATTA GTTGAGTCAA TTTTAAAAGA AAATGCAAAA 
CCTTTATCAG CAGCATCGCT ACCTGGCCCC AACCTTAATG TTGTCCAGCC TAGTATAGCA 
GTTCCTTCAT CATGGCCTAA CTCCATTGAC AATCCCCGGT CTTCCCGGCA AAGGCAATTG 
AAACAGCTTC GCCAAGGTTT AATTGAGGCC AAAAACAGCC TCAATGAAGT CAGATGCGAA 
GTACAAACTG GTTCTGAAAT TTTAAAAAAA CTCAGTTCAT TAACAGCAAA CCGAAACTGT 
GCTTCCCCTG AAACACCTTC CAGACCATGC GTGCCAATGA GAACTAATGA TTGA