LOC101242576 cDNA ORF clone, Ciona intestinalis(vase tunicate)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC101242576
Entrez Gene ID	101242576
Full Name	uncharacterized LOC101242576
Gene Type	protein-coding
Organism	Ciona intestinalis(vase tunicate)

mRNA and Protein(s)

mRNA	Protein	Name
XM_018815798.1	XP_018671343.1	uncharacterized protein LOC101242576

Pathways from BioSystems
Gene Ontology

The following LOC101242576 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC101242576 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCi69735	XM_018815798.1 Latest version!	Ciona intestinalis uncharacterized LOC101242576 (LOC101242576), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$713.30 $1019.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC101242576 ( XM_018815798.1 ) cDNA ORF clone, Ciona intestinalis(vase tunicate) -> XP_018671343.1 Ciona intestinalis uncharacterized LOC101242576 (LOC101242576), mRNA.

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CloneID	OCi69735
Clone ID Related Accession (Same CDS sequence)	XM_018815798.1
Accession Version	XM_018815798.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3849bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-20
Organism	Ciona intestinalis(vase tunicate)
Product	uncharacterized protein LOC101242576
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004190425.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ciona intestinalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END##

ATGGATGCGA GAGATCGCAA GGAATCCAGG TCCGCCTCAG TCGTGCACCA TATTTCGTAT 
AAAGTTATGA CTGAACTTGA TGAACTATTG GAAGGGCGAA AAATGCGTCG AATTTCTGTC 
GCTAGCGACG GTAACTGTCT TTACCACGCG TTGGCGCACC AGCTCTCCTT GCAAGGTGTG 
AACCATTCAT ACGATGAAGT GAGAAAAGCC TGTGTCAGTT ATCTGCAAAA GAACCCACGT 
TTTGGGAAGA TTGACTGGAT GAGAGCGGTA GACACGGGCG AAACAAGAGA GGAGTATCTT 
CATCGTAATT CCCAAGATGG AGAATGGAGT GATGACATTA TGCTCATGGC GGCGTCATCC 
GCGTTTGGTT ACGTCATTAA AATCGTGACG TTGAATGAAA CCGTCAACGT CCTGCCTAAC 
GTTAAGAAGT ACAAGCCTGA GCTTGTTGTG GCGAAAATCT CCGAGTATCA ATATGTCAGT 
GTGGAGAAAA AGGACGGCCA TGCGAACAAC ATGGAAGCGT CAAGAACCTT TGTACTAAAA 
GCGAAACAGA ACCCGAGTAT CAAGAAAACA AAAAAGGGGA CAGACGTTGT CCATTTAGAC 
AAGAGAAGCA AAGGGAAAAG AGGTAAAGCC ATGAACGGTC CAGGACTGGG ACCGAGTAAA 
TGGGATCCCG ATCAGGAATC CCTGCTGTTT GGCGCCAATG ACGTCGAAGA AGAAGAGGAG 
CTACCTTTAT ATGACCGGTT TACATGCGAA CCACCAGAAG ACGATTCGAG AACCTCATCA 
AATGTTGCAA AGTTTTTTGC CAAGACCTTC AAACTATCTT CCTACCTAAT ATTTGGTGGT 
CTATTGTTTG GCGGAGCTTT AATATCAAAG GCATGTCTTA TGATCTTAGT GAACAGCGCA 
AAAGTGTACC CGGGCGATCC AAACGATCAG TCTGTGATGA AAGATCATGA TGTAATAAGA 
GCATGGAGCT TTATTGTTAT ACTGCTCATG CTACTTCTAC CAGAAGTACT CACCATGATG 
TATTCACTAT ACCGGATAAT TATGAAAGCT GAACCGGATA TGGACATGAA CACTGTGATC 
TGGGGTGGAT TTTGGGAGTT TCTTCATGCT GTTGGGGAGG GGATTCTTTT CTTTAAAGTA 
TTGCCTTATT TGGATGCTAC TGTTGCCCTG TTGATGTTAC CATTGGTTGG AATTATTCCG 
AACTGTATTC ACATACAAGC AAAGGTCACT TCTATAACTC ATAACGAGAG GCGGCCCTCA 
CGAACTGCAA AACAAAGACG AATTAGGGAT TTGGTTCTTG CTGTGGTGGC ATTGGTCCTC 
CAACTGTGTG GATTACTTGT TTGTTTTGCT TGTTTCTTTG GGGATAACTG GTTAAGGTTT 
TTCTCCCTAA ATTACACATA CATTTGGGCA TTTTCTGGTA TTGTGCTTAC TTCCTGTCGG 
TATTGGGAAA ACTTTGTGAC AGGGGAGTTT ATTTTCTCCA AAAAGTTTTC GATTAAAGCG 
CAGACTTTGC AAAACAAACT TGATGCAACA AGATTTAAGA CATCCTTCAT TTTTTCGCTG 
ATGAAATGTG GAGTTCTGAT TGGGTTTTGT TTTCTAACTT TTGTAGTTCT TGAAAATGAA 
ACATATACCA GCAATTTTGT GAATCTCGAT ACAGACCCCT ATTCCACTGC TCGGTATAAC 
AAAATCATAT CGTTGCTCAG TACATCAGAT GGAAGGGTTA GGACCAGTGA CAGAAATGAC 
ATAATTGCGA GATTGATTTA CGTGTTCGTC ACTCAAGGCT GTTGTTCTTT CGCTGCATAT 
TTCTTTGGTC GGGTGGCTTG TCTTACCCTT ATTCAACGTG AAGCTTATGC ATTCCCCACA 
GTCTTGGTTA CCCCGGTCAT TGCTGCATTC TCTGCAGCAC TTGCTGTTTA CAGACAAGCT 
GGAGGAGATA AATTTAACTT CCTATCATTT GTCGGTTTGG GAAATACCTA CAAGAGTGTC 
CCAAATCTTA GCTACTACAT TGATTTCAAC AACAAACCCT TTGATAATAT TACTGACATT 
GGTGTTCTGC GTGGATATTG GACAGGGATT GTGTGTGTCG GTTTGTTATT TGGCTGGCTC 
TCTCTCATAC TCTTCACAGT ATTCATTTGG AACAGCAAAC ATGATCGCCT TCAAAGAACT 
GAAGTCATTT TTACTAAAGC ATTATATGGA GGGCCACTTA TTGACCAAGT GTTAATGCTC 
AATCGACGAC AATTTGAAAG CAATTATAAC AAGAATCAGA AAGCCTTAGA AGAGAAACAA 
GATAAGAAAA TTGAAGAAAG GCGAAAAAGC TCTAGCACAA GATCAAGAAG GAGATCTTCT 
CGTCGACTGA CAATGACAGC CAACCATAAG TTCACACCAC AGCTTTTCCT TTGTGCCACC 
ATGTGGCACG AAACTGAGCA AGAAATGACC CAAATTTTAA CATCACTTAT GAGATTGGAT 
AAGGACCAAG GAAGCCGGAG AGAAAACTCA CAAAAAGATC CAGATTATTA CAATTTCCAA 
ATCCATGTAA TGTTTGATGA TGCAATGGAA ACACCCAAGG GTTCAACTGA TATTAAAACA 
AACAAATTTG TTCAACAACT TTGTACTTTA ATTCCATTAG CAGCAAACAA AGTTGATCTT 
GGTACTGGTT ATGACCTTTC ACCCCCAGTT ATCTACCCAA CCCCTTATGG TGGTCGACTT 
GAATTTATTC TTCCACATGG CAACCTTATG GTAGTACATC TCAAGGATAA AGCAAAAATT 
AGGCATCGCA AACGTTGGTC ACAATGTATG TACATGTACT ACATCCTCGG CTATCTCCAA 
GCAACAAAGA AAGCTTACAA ACTTGACGAT GTGTTCTTGC TTGCTCTTGA TGGTGATGTT 
GACTTTCAAC CACACGCTGT ACACCTCTTG TTGGATCGAA TGAAGAGAAA TCCGGATGTT 
GGAGCTGCTT GTGGAAGAAT TCACCCTACA GGTTCAGGAC CAGTTGTATG GTTTCAGAAA 
TTTGAATATG CTGTTGGTCA TTGGCTTCAG AAAACTGCCG AACATGTTCT TGGTTGTGTC 
TTGTGTAGTC CTGGTTGTTT TAGCATGTTT CGAGGAAGTG CCATAGTTGA TGTTAATGTT 
GCTAAAATGT ACACTACCAA AGCTACAGAA GCCCTGCATT ATGTACAGTG GGATCAAGGT 
GAAGATCGTT GGTTGTGCAC ATTGTTGTTG AAACAAGGTT GGAGAATTGA ATACAGTGCA 
GCTTCCGATT CATATACTTT TGCACCTGAA GAATTCAAAG AGTTTTACAA CCAGCGTCGA 
CGATGGGGAC CTTCCACAAT GGCAAATATA TTTGATATTC TGATGGATGC AAAGCTTACA 
GTAAAGAACA ACATCTACAT CTCATGGGGT TATATTTCCT ACCAGATTGG TTTGATGGTT 
TCTTCAATTC TTGGTCCCGC AACTGTTGTT ATGATTGTCC AGGGAGCATA CCAATATGTG 
TTTCATTGGA GTAGTGCTGT GGCCCTTGTT GTATCCTTGA TACCAGTGAT CATATTCATT 
ATATTATGCT ATACAACATC AGCAGATACG CAGGTTGCAG TGGCGGGCAT TCTGACCATC 
TTATATGCTT TGGTGATGAT GGCTGTGATT GTTGGTGTTG TTGGTGCAAT GGCAACAAAT 
TCCATTCTTG ATCCAAACAA TATATTTATG ATAATGTTGG TTGGTTTGTA TGCTTTCACT 
GGTTTGGTAC ATCCACAAGA ACTAATGTGT CTTATCCATG GCATTCTCTA CTACCTATGT 
GTGCCATCTG CATTCATTTT CTTGATGGTC TACAGGTATA TATGGCATCA AATTTCACAT 
AAAATTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018671343.1
CDS	61..3909
Translation	MDARDRKESRSASVVHHISYKVMTELDELLEGRKMRRISVASDGNCLYHALAHQLSLQGVNHSYDEVRKACVSYLQKNPRFGKIDWMRAVDTGETREEYLHRNSQDGEWSDDIMLMAASSAFGYVIKIVTLNETVNVLPNVKKYKPELVVAKISEYQYVSVEKKDGHANNMEASRTFVLKAKQNPSIKKTKKGTDVVHLDKRSKGKRGKAMNGPGLGPSKWDPDQESLLFGANDVEEEEELPLYDRFTCEPPEDDSRTSSNVAKFFAKTFKLSSYLIFGGLLFGGALISKACLMILVNSAKVYPGDPNDQSVMKDHDVIRAWSFIVILLMLLLPEVLTMMYSLYRIIMKAEPDMDMNTVIWGGFWEFLHAVGEGILFFKVLPYLDATVALLMLPLVGIIPNCIHIQAKVTSITHNERRPSRTAKQRRIRDLVLAVVALVLQLCGLLVCFACFFGDNWLRFFSLNYTYIWAFSGIVLTSCRYWENFVTGEFIFSKKFSIKAQTLQNKLDATRFKTSFIFSLMKCGVLIGFCFLTFVVLENETYTSNFVNLDTDPYSTARYNKIISLLSTSDGRVRTSDRNDIIARLIYVFVTQGCCSFAAYFFGRVACLTLIQREAYAFPTVLVTPVIAAFSAALAVYRQAGGDKFNFLSFVGLGNTYKSVPNLSYYIDFNNKPFDNITDIGVLRGYWTGIVCVGLLFGWLSLILFTVFIWNSKHDRLQRTEVIFTKALYGGPLIDQVLMLNRRQFESNYNKNQKALEEKQDKKIEERRKSSSTRSRRRSSRRLTMTANHKFTPQLFLCATMWHETEQEMTQILTSLMRLDKDQGSRRENSQKDPDYYNFQIHVMFDDAMETPKGSTDIKTNKFVQQLCTLIPLAANKVDLGTGYDLSPPVIYPTPYGGRLEFILPHGNLMVVHLKDKAKIRHRKRWSQCMYMYYILGYLQATKKAYKLDDVFLLALDGDVDFQPHAVHLLLDRMKRNPDVGAACGRIHPTGSGPVVWFQKFEYAVGHWLQKTAEHVLGCVLCSPGCFSMFRGSAIVDVNVAKMYTTKATEALHYVQWDQGEDRWLCTLLLKQGWRIEYSAASDSYTFAPEEFKEFYNQRRRWGPSTMANIFDILMDAKLTVKNNIYISWGYISYQIGLMVSSILGPATVVMIVQGAYQYVFHWSSAVALVVSLIPVIIFIILCYTTSADTQVAVAGILTILYALVMMAVIVGVVGAMATNSILDPNNIFMIMLVGLYAFTGLVHPQELMCLIHGILYYLCVPSAFIFLMVYRYIWHQISHKI

Target ORF information:

RefSeq Version	XM_018815798.1
Organism	Ciona intestinalis(vase tunicate)
Definition	Ciona intestinalis uncharacterized LOC101242576 (LOC101242576), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018815798.1

ORF Insert Sequence:

ATGGATGCGA GAGATCGCAA GGAATCCAGG TCCGCCTCAG TCGTGCACCA TATTTCGTAT 
AAAGTTATGA CTGAACTTGA TGAACTATTG GAAGGGCGAA AAATGCGTCG AATTTCTGTC 
GCTAGCGACG GTAACTGTCT TTACCACGCG TTGGCGCACC AGCTCTCCTT GCAAGGTGTG 
AACCATTCAT ACGATGAAGT GAGAAAAGCC TGTGTCAGTT ATCTGCAAAA GAACCCACGT 
TTTGGGAAGA TTGACTGGAT GAGAGCGGTA GACACGGGCG AAACAAGAGA GGAGTATCTT 
CATCGTAATT CCCAAGATGG AGAATGGAGT GATGACATTA TGCTCATGGC GGCGTCATCC 
GCGTTTGGTT ACGTCATTAA AATCGTGACG TTGAATGAAA CCGTCAACGT CCTGCCTAAC 
GTTAAGAAGT ACAAGCCTGA GCTTGTTGTG GCGAAAATCT CCGAGTATCA ATATGTCAGT 
GTGGAGAAAA AGGACGGCCA TGCGAACAAC ATGGAAGCGT CAAGAACCTT TGTACTAAAA 
GCGAAACAGA ACCCGAGTAT CAAGAAAACA AAAAAGGGGA CAGACGTTGT CCATTTAGAC 
AAGAGAAGCA AAGGGAAAAG AGGTAAAGCC ATGAACGGTC CAGGACTGGG ACCGAGTAAA 
TGGGATCCCG ATCAGGAATC CCTGCTGTTT GGCGCCAATG ACGTCGAAGA AGAAGAGGAG 
CTACCTTTAT ATGACCGGTT TACATGCGAA CCACCAGAAG ACGATTCGAG AACCTCATCA 
AATGTTGCAA AGTTTTTTGC CAAGACCTTC AAACTATCTT CCTACCTAAT ATTTGGTGGT 
CTATTGTTTG GCGGAGCTTT AATATCAAAG GCATGTCTTA TGATCTTAGT GAACAGCGCA 
AAAGTGTACC CGGGCGATCC AAACGATCAG TCTGTGATGA AAGATCATGA TGTAATAAGA 
GCATGGAGCT TTATTGTTAT ACTGCTCATG CTACTTCTAC CAGAAGTACT CACCATGATG 
TATTCACTAT ACCGGATAAT TATGAAAGCT GAACCGGATA TGGACATGAA CACTGTGATC 
TGGGGTGGAT TTTGGGAGTT TCTTCATGCT GTTGGGGAGG GGATTCTTTT CTTTAAAGTA 
TTGCCTTATT TGGATGCTAC TGTTGCCCTG TTGATGTTAC CATTGGTTGG AATTATTCCG 
AACTGTATTC ACATACAAGC AAAGGTCACT TCTATAACTC ATAACGAGAG GCGGCCCTCA 
CGAACTGCAA AACAAAGACG AATTAGGGAT TTGGTTCTTG CTGTGGTGGC ATTGGTCCTC 
CAACTGTGTG GATTACTTGT TTGTTTTGCT TGTTTCTTTG GGGATAACTG GTTAAGGTTT 
TTCTCCCTAA ATTACACATA CATTTGGGCA TTTTCTGGTA TTGTGCTTAC TTCCTGTCGG 
TATTGGGAAA ACTTTGTGAC AGGGGAGTTT ATTTTCTCCA AAAAGTTTTC GATTAAAGCG 
CAGACTTTGC AAAACAAACT TGATGCAACA AGATTTAAGA CATCCTTCAT TTTTTCGCTG 
ATGAAATGTG GAGTTCTGAT TGGGTTTTGT TTTCTAACTT TTGTAGTTCT TGAAAATGAA 
ACATATACCA GCAATTTTGT GAATCTCGAT ACAGACCCCT ATTCCACTGC TCGGTATAAC 
AAAATCATAT CGTTGCTCAG TACATCAGAT GGAAGGGTTA GGACCAGTGA CAGAAATGAC 
ATAATTGCGA GATTGATTTA CGTGTTCGTC ACTCAAGGCT GTTGTTCTTT CGCTGCATAT 
TTCTTTGGTC GGGTGGCTTG TCTTACCCTT ATTCAACGTG AAGCTTATGC ATTCCCCACA 
GTCTTGGTTA CCCCGGTCAT TGCTGCATTC TCTGCAGCAC TTGCTGTTTA CAGACAAGCT 
GGAGGAGATA AATTTAACTT CCTATCATTT GTCGGTTTGG GAAATACCTA CAAGAGTGTC 
CCAAATCTTA GCTACTACAT TGATTTCAAC AACAAACCCT TTGATAATAT TACTGACATT 
GGTGTTCTGC GTGGATATTG GACAGGGATT GTGTGTGTCG GTTTGTTATT TGGCTGGCTC 
TCTCTCATAC TCTTCACAGT ATTCATTTGG AACAGCAAAC ATGATCGCCT TCAAAGAACT 
GAAGTCATTT TTACTAAAGC ATTATATGGA GGGCCACTTA TTGACCAAGT GTTAATGCTC 
AATCGACGAC AATTTGAAAG CAATTATAAC AAGAATCAGA AAGCCTTAGA AGAGAAACAA 
GATAAGAAAA TTGAAGAAAG GCGAAAAAGC TCTAGCACAA GATCAAGAAG GAGATCTTCT 
CGTCGACTGA CAATGACAGC CAACCATAAG TTCACACCAC AGCTTTTCCT TTGTGCCACC 
ATGTGGCACG AAACTGAGCA AGAAATGACC CAAATTTTAA CATCACTTAT GAGATTGGAT 
AAGGACCAAG GAAGCCGGAG AGAAAACTCA CAAAAAGATC CAGATTATTA CAATTTCCAA 
ATCCATGTAA TGTTTGATGA TGCAATGGAA ACACCCAAGG GTTCAACTGA TATTAAAACA 
AACAAATTTG TTCAACAACT TTGTACTTTA ATTCCATTAG CAGCAAACAA AGTTGATCTT 
GGTACTGGTT ATGACCTTTC ACCCCCAGTT ATCTACCCAA CCCCTTATGG TGGTCGACTT 
GAATTTATTC TTCCACATGG CAACCTTATG GTAGTACATC TCAAGGATAA AGCAAAAATT 
AGGCATCGCA AACGTTGGTC ACAATGTATG TACATGTACT ACATCCTCGG CTATCTCCAA 
GCAACAAAGA AAGCTTACAA ACTTGACGAT GTGTTCTTGC TTGCTCTTGA TGGTGATGTT 
GACTTTCAAC CACACGCTGT ACACCTCTTG TTGGATCGAA TGAAGAGAAA TCCGGATGTT 
GGAGCTGCTT GTGGAAGAAT TCACCCTACA GGTTCAGGAC CAGTTGTATG GTTTCAGAAA 
TTTGAATATG CTGTTGGTCA TTGGCTTCAG AAAACTGCCG AACATGTTCT TGGTTGTGTC 
TTGTGTAGTC CTGGTTGTTT TAGCATGTTT CGAGGAAGTG CCATAGTTGA TGTTAATGTT 
GCTAAAATGT ACACTACCAA AGCTACAGAA GCCCTGCATT ATGTACAGTG GGATCAAGGT 
GAAGATCGTT GGTTGTGCAC ATTGTTGTTG AAACAAGGTT GGAGAATTGA ATACAGTGCA 
GCTTCCGATT CATATACTTT TGCACCTGAA GAATTCAAAG AGTTTTACAA CCAGCGTCGA 
CGATGGGGAC CTTCCACAAT GGCAAATATA TTTGATATTC TGATGGATGC AAAGCTTACA 
GTAAAGAACA ACATCTACAT CTCATGGGGT TATATTTCCT ACCAGATTGG TTTGATGGTT 
TCTTCAATTC TTGGTCCCGC AACTGTTGTT ATGATTGTCC AGGGAGCATA CCAATATGTG 
TTTCATTGGA GTAGTGCTGT GGCCCTTGTT GTATCCTTGA TACCAGTGAT CATATTCATT 
ATATTATGCT ATACAACATC AGCAGATACG CAGGTTGCAG TGGCGGGCAT TCTGACCATC 
TTATATGCTT TGGTGATGAT GGCTGTGATT GTTGGTGTTG TTGGTGCAAT GGCAACAAAT 
TCCATTCTTG ATCCAAACAA TATATTTATG ATAATGTTGG TTGGTTTGTA TGCTTTCACT 
GGTTTGGTAC ATCCACAAGA ACTAATGTGT CTTATCCATG GCATTCTCTA CTACCTATGT 
GTGCCATCTG CATTCATTTT CTTGATGGTC TACAGGTATA TATGGCATCA AATTTCACAT 
AAAATTTAA