LOC100176044 cDNA ORF clone, Ciona intestinalis(vase tunicate)

The following LOC100176044 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100176044 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OCi08106 XM_002127473.5
Latest version!
Ciona intestinalis uncharacterized LOC100176044 (LOC100176044), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OCi154331 XM_026837151.1
Latest version!
Ciona intestinalis uncharacterized LOC100176044 (LOC100176044), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OCi08106 XM_002127473.4 Ciona intestinalis uncharacterized LOC100176044 (LOC100176044), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OCi08106
    Clone ID Related Accession (Same CDS sequence) XM_002127473.4 , XM_002127473.5
    Accession Version XM_002127473.4 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1782bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-10-20
    Organism Ciona intestinalis(vase tunicate)
    Product uncharacterized protein LOC100176044
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_020177.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 21, 2016 this sequence version replaced XM_002127473.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ciona intestinalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAGTTTCG AAATAAAGAT AGTTGTCCTT CTTCTGTCGG CATGCTGTAC ACTAATCAAC 
    CTCTTTGCAT TGGTTTGCAT CGTAAGCAAC TTCAAACGAC TTCGACAGCG GATGTATATC
    TTCATTATCA ACCTTACCAT TGTTGACGTC ATAGTGGGGG TCGCGTATAT GATCGACGTC
    GTGACCAAGA TCCTTCGAAG CGAAGCCTCT GTGACGTCAC AATCTGAGGG TTTTGGAGCG
    ACAGCGGCGA CGGAAGGCTT GAAAATTGCG TCAATTCTCC TCTCGGCTTT GAACACCAGC
    GTCGTGACGT ACGCCCTACA TAAGCGGACC ACAAGTATGG GGCGCCACCG TGCGGAGTCC
    CTTAACAACG ACACAACGGG GAATCCCCTA CACATCCCTG CCTTCGACAC GATGCTACGT
    GTGTTGTCGC TTGGCACTCA GACACCCAGC GCCAATCGAA AGGGTTCACG CCTCAACCAA
    TCAAGCCCCA GGAAGCAGCC AAGCGTAAAC GGGAATTCTC CAAAGCACAT CAATGGCGAT
    TGCCTCGAAT GCGAGGAAGA AGAAACGAGC TTGGCTAAAA AAAACGAATC GGACAGACGG
    ATCGGCCAGC AGAGACTTTC GCCCGGAGAT AAGCAAGAAT CCTCGAGTAA ATCACGAAGG
    AAGAAAAGCA TGTCACGACT TACAGCTATG CTCTTGCCCC GTACAAGCCT CGTCAGCATT
    CGTCCCTCCA ACTTCCCACG CTCCATGACG TCATCAACTT ACAGCCAATC ATACGTTGGT
    CGCCATGGCA ACTCGGTGGT CAGCGTCCGT ACAACAGTCG CCATCTTATT GGTTATTTGG
    ATTGTTTTCC TAATCACGTG GTTGTTGCCA GTAGCAACGA GAGCTGTGAT GAAAGCAAGC
    GGGTCATCAA ATCAAGTAGC AGAAATTTTT TCTTGCTCTC TGGAGTGCGA AACGGAATAT
    TTTCCAAATA TTGAGCAAAC CAATAATGAT GAAAAAAATC AAAGTCCATT TTCTGACAGC
    AATGATTATG ATACGGGCGT AATGGCATCG AATCTTTCAA CCGGCTACGT GAAAAGTGAA
    GAAAACAGTA CAGGACTTCA CCCGAACCCG ATACGACGCA TTAGGCACAC AAAATCTCGA
    ATCAGGAGAT ATAAAGATGC CTTATTTAAC GAGAGTGGTT TCGTGGCCCA CTCGCTATTA
    ACTGTGACGT CAGAATCGAA CTACACAGAC GTCAACTCAT CCGGGGATTT CCCGATTCCA
    TGGGAACAGC GCCCCATGTG TCCAGAATCG TGTTCAAATC TTTTTTATCC AATCAGCAAG
    CTACACGTGA TTTTTCATGC TCTGGTTATC ACAGTCACGT GGCTGTTTAT GCTCATTATC
    TCGCTACGCC TCTTGTGGCT GAGAAAGCAT TCGAAGAACG TGTTTGTGCG CTGTAGCGCA
    CTCTGGCGGT TTATACTCTA TACCGCAGTA TTTTACTTGG TGGCGTACGC GACTTACGTC
    GCCGTATGCG TGCTCGATGC AATGCACACG AACACACCGA ACGATGCAAA TCGCGCAACA
    TCTATTATGA TGCTGAACGT GACAATGAAC TATGACCGAA CAAATAGATC TATGACGTCA
    CAACCTGCAA ATCTGGTACC CCCGCATGGG TTTGAACCCA GTTTGTTATT ACTAGAAGTG
    GCGTCGTGTC TCGTTCTTTT TCATTCCACA ATAGCACCAT CTTTATACAT GGTAAGGCTG
    CTCGGCTTTA GACGTCTTCT CGCCGGTATT CGGTTTAGAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002127509.1
    CDS88..1869
    Translation

    Target ORF information:

    RefSeq Version XM_002127473.4
    Organism Ciona intestinalis(vase tunicate)
    Definition Ciona intestinalis uncharacterized LOC100176044 (LOC100176044), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002127473.4

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAGTTTCG AAATAAAGAT AGTTGTCCTT CTTCTGTCGG CATGCTGTAC ACTAATCAAC 
    CTCTTTGCAT TGGTTTGCAT CGTAAGCAAC TTCAAACGAC TTCGACAGCG GATGTATATC
    TTCATTATCA ACCTTACCAT TGTTGACGTC ATAGTGGGGG TCGCGTATAT GATCGACGTC
    GTGACCAAGA TCCTTCGAAG CGAAGCCTCT GTGACGTCAC AATCTGAGGG TTTTGGAGCG
    ACAGCGGCGA CGGAAGGCTT GAAAATTGCG TCAATTCTCC TCTCGGCTTT GAACACCAGC
    GTCGTGACGT ACGCCCTACA TAAGCGGACC ACAAGTATGG GGCGCCACCG TGCGGAGTCC
    CTTAACAACG ACACAACGGG GAATCCCCTA CACATCCCTG CCTTCGACAC GATGCTACGT
    GTGTTGTCGC TTGGCACTCA GACACCCAGC GCCAATCGAA AGGGTTCACG CCTCAACCAA
    TCAAGCCCCA GGAAGCAGCC AAGCGTAAAC GGGAATTCTC CAAAGCACAT CAATGGCGAT
    TGCCTCGAAT GCGAGGAAGA AGAAACGAGC TTGGCTAAAA AAAACGAATC GGACAGACGG
    ATCGGCCAGC AGAGACTTTC GCCCGGAGAT AAGCAAGAAT CCTCGAGTAA ATCACGAAGG
    AAGAAAAGCA TGTCACGACT TACAGCTATG CTCTTGCCCC GTACAAGCCT CGTCAGCATT
    CGTCCCTCCA ACTTCCCACG CTCCATGACG TCATCAACTT ACAGCCAATC ATACGTTGGT
    CGCCATGGCA ACTCGGTGGT CAGCGTCCGT ACAACAGTCG CCATCTTATT GGTTATTTGG
    ATTGTTTTCC TAATCACGTG GTTGTTGCCA GTAGCAACGA GAGCTGTGAT GAAAGCAAGC
    GGGTCATCAA ATCAAGTAGC AGAAATTTTT TCTTGCTCTC TGGAGTGCGA AACGGAATAT
    TTTCCAAATA TTGAGCAAAC CAATAATGAT GAAAAAAATC AAAGTCCATT TTCTGACAGC
    AATGATTATG ATACGGGCGT AATGGCATCG AATCTTTCAA CCGGCTACGT GAAAAGTGAA
    GAAAACAGTA CAGGACTTCA CCCGAACCCG ATACGACGCA TTAGGCACAC AAAATCTCGA
    ATCAGGAGAT ATAAAGATGC CTTATTTAAC GAGAGTGGTT TCGTGGCCCA CTCGCTATTA
    ACTGTGACGT CAGAATCGAA CTACACAGAC GTCAACTCAT CCGGGGATTT CCCGATTCCA
    TGGGAACAGC GCCCCATGTG TCCAGAATCG TGTTCAAATC TTTTTTATCC AATCAGCAAG
    CTACACGTGA TTTTTCATGC TCTGGTTATC ACAGTCACGT GGCTGTTTAT GCTCATTATC
    TCGCTACGCC TCTTGTGGCT GAGAAAGCAT TCGAAGAACG TGTTTGTGCG CTGTAGCGCA
    CTCTGGCGGT TTATACTCTA TACCGCAGTA TTTTACTTGG TGGCGTACGC GACTTACGTC
    GCCGTATGCG TGCTCGATGC AATGCACACG AACACACCGA ACGATGCAAA TCGCGCAACA
    TCTATTATGA TGCTGAACGT GACAATGAAC TATGACCGAA CAAATAGATC TATGACGTCA
    CAACCTGCAA ATCTGGTACC CCCGCATGGG TTTGAACCCA GTTTGTTATT ACTAGAAGTG
    GCGTCGTGTC TCGTTCTTTT TCATTCCACA ATAGCACCAT CTTTATACAT GGTAAGGCTG
    CTCGGCTTTA GACGTCTTCT CGCCGGTATT CGGTTTAGAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OCi08106
    Clone ID Related Accession (Same CDS sequence) XM_002127473.4 , XM_002127473.5
    Accession Version XM_002127473.5 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1782bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-10-21
    Organism Ciona intestinalis(vase tunicate)
    Product uncharacterized protein LOC100176044 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_020177.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 22, 2018 this sequence version replaced XM_002127473.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Ciona intestinalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAGTTTCG AAATAAAGAT AGTTGTCCTT CTTCTGTCGG CATGCTGTAC ACTAATCAAC 
    CTCTTTGCAT TGGTTTGCAT CGTAAGCAAC TTCAAACGAC TTCGACAGCG GATGTATATC
    TTCATTATCA ACCTTACCAT TGTTGACGTC ATAGTGGGGG TCGCGTATAT GATCGACGTC
    GTGACCAAGA TCCTTCGAAG CGAAGCCTCT GTGACGTCAC AATCTGAGGG TTTTGGAGCG
    ACAGCGGCGA CGGAAGGCTT GAAAATTGCG TCAATTCTCC TCTCGGCTTT GAACACCAGC
    GTCGTGACGT ACGCCCTACA TAAGCGGACC ACAAGTATGG GGCGCCACCG TGCGGAGTCC
    CTTAACAACG ACACAACGGG GAATCCCCTA CACATCCCTG CCTTCGACAC GATGCTACGT
    GTGTTGTCGC TTGGCACTCA GACACCCAGC GCCAATCGAA AGGGTTCACG CCTCAACCAA
    TCAAGCCCCA GGAAGCAGCC AAGCGTAAAC GGGAATTCTC CAAAGCACAT CAATGGCGAT
    TGCCTCGAAT GCGAGGAAGA AGAAACGAGC TTGGCTAAAA AAAACGAATC GGACAGACGG
    ATCGGCCAGC AGAGACTTTC GCCCGGAGAT AAGCAAGAAT CCTCGAGTAA ATCACGAAGG
    AAGAAAAGCA TGTCACGACT TACAGCTATG CTCTTGCCCC GTACAAGCCT CGTCAGCATT
    CGTCCCTCCA ACTTCCCACG CTCCATGACG TCATCAACTT ACAGCCAATC ATACGTTGGT
    CGCCATGGCA ACTCGGTGGT CAGCGTCCGT ACAACAGTCG CCATCTTATT GGTTATTTGG
    ATTGTTTTCC TAATCACGTG GTTGTTGCCA GTAGCAACGA GAGCTGTGAT GAAAGCAAGC
    GGGTCATCAA ATCAAGTAGC AGAAATTTTT TCTTGCTCTC TGGAGTGCGA AACGGAATAT
    TTTCCAAATA TTGAGCAAAC CAATAATGAT GAAAAAAATC AAAGTCCATT TTCTGACAGC
    AATGATTATG ATACGGGCGT AATGGCATCG AATCTTTCAA CCGGCTACGT GAAAAGTGAA
    GAAAACAGTA CAGGACTTCA CCCGAACCCG ATACGACGCA TTAGGCACAC AAAATCTCGA
    ATCAGGAGAT ATAAAGATGC CTTATTTAAC GAGAGTGGTT TCGTGGCCCA CTCGCTATTA
    ACTGTGACGT CAGAATCGAA CTACACAGAC GTCAACTCAT CCGGGGATTT CCCGATTCCA
    TGGGAACAGC GCCCCATGTG TCCAGAATCG TGTTCAAATC TTTTTTATCC AATCAGCAAG
    CTACACGTGA TTTTTCATGC TCTGGTTATC ACAGTCACGT GGCTGTTTAT GCTCATTATC
    TCGCTACGCC TCTTGTGGCT GAGAAAGCAT TCGAAGAACG TGTTTGTGCG CTGTAGCGCA
    CTCTGGCGGT TTATACTCTA TACCGCAGTA TTTTACTTGG TGGCGTACGC GACTTACGTC
    GCCGTATGCG TGCTCGATGC AATGCACACG AACACACCGA ACGATGCAAA TCGCGCAACA
    TCTATTATGA TGCTGAACGT GACAATGAAC TATGACCGAA CAAATAGATC TATGACGTCA
    CAACCTGCAA ATCTGGTACC CCCGCATGGG TTTGAACCCA GTTTGTTATT ACTAGAAGTG
    GCGTCGTGTC TCGTTCTTTT TCATTCCACA ATAGCACCAT CTTTATACAT GGTAAGGCTG
    CTCGGCTTTA GACGTCTTCT CGCCGGTATT CGGTTTAGAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002127509.1
    CDS262..2043
    Translation

    Target ORF information:

    RefSeq Version XM_002127473.5
    Organism Ciona intestinalis(vase tunicate)
    Definition Ciona intestinalis uncharacterized LOC100176044 (LOC100176044), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002127473.5

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAGTTTCG AAATAAAGAT AGTTGTCCTT CTTCTGTCGG CATGCTGTAC ACTAATCAAC 
    CTCTTTGCAT TGGTTTGCAT CGTAAGCAAC TTCAAACGAC TTCGACAGCG GATGTATATC
    TTCATTATCA ACCTTACCAT TGTTGACGTC ATAGTGGGGG TCGCGTATAT GATCGACGTC
    GTGACCAAGA TCCTTCGAAG CGAAGCCTCT GTGACGTCAC AATCTGAGGG TTTTGGAGCG
    ACAGCGGCGA CGGAAGGCTT GAAAATTGCG TCAATTCTCC TCTCGGCTTT GAACACCAGC
    GTCGTGACGT ACGCCCTACA TAAGCGGACC ACAAGTATGG GGCGCCACCG TGCGGAGTCC
    CTTAACAACG ACACAACGGG GAATCCCCTA CACATCCCTG CCTTCGACAC GATGCTACGT
    GTGTTGTCGC TTGGCACTCA GACACCCAGC GCCAATCGAA AGGGTTCACG CCTCAACCAA
    TCAAGCCCCA GGAAGCAGCC AAGCGTAAAC GGGAATTCTC CAAAGCACAT CAATGGCGAT
    TGCCTCGAAT GCGAGGAAGA AGAAACGAGC TTGGCTAAAA AAAACGAATC GGACAGACGG
    ATCGGCCAGC AGAGACTTTC GCCCGGAGAT AAGCAAGAAT CCTCGAGTAA ATCACGAAGG
    AAGAAAAGCA TGTCACGACT TACAGCTATG CTCTTGCCCC GTACAAGCCT CGTCAGCATT
    CGTCCCTCCA ACTTCCCACG CTCCATGACG TCATCAACTT ACAGCCAATC ATACGTTGGT
    CGCCATGGCA ACTCGGTGGT CAGCGTCCGT ACAACAGTCG CCATCTTATT GGTTATTTGG
    ATTGTTTTCC TAATCACGTG GTTGTTGCCA GTAGCAACGA GAGCTGTGAT GAAAGCAAGC
    GGGTCATCAA ATCAAGTAGC AGAAATTTTT TCTTGCTCTC TGGAGTGCGA AACGGAATAT
    TTTCCAAATA TTGAGCAAAC CAATAATGAT GAAAAAAATC AAAGTCCATT TTCTGACAGC
    AATGATTATG ATACGGGCGT AATGGCATCG AATCTTTCAA CCGGCTACGT GAAAAGTGAA
    GAAAACAGTA CAGGACTTCA CCCGAACCCG ATACGACGCA TTAGGCACAC AAAATCTCGA
    ATCAGGAGAT ATAAAGATGC CTTATTTAAC GAGAGTGGTT TCGTGGCCCA CTCGCTATTA
    ACTGTGACGT CAGAATCGAA CTACACAGAC GTCAACTCAT CCGGGGATTT CCCGATTCCA
    TGGGAACAGC GCCCCATGTG TCCAGAATCG TGTTCAAATC TTTTTTATCC AATCAGCAAG
    CTACACGTGA TTTTTCATGC TCTGGTTATC ACAGTCACGT GGCTGTTTAT GCTCATTATC
    TCGCTACGCC TCTTGTGGCT GAGAAAGCAT TCGAAGAACG TGTTTGTGCG CTGTAGCGCA
    CTCTGGCGGT TTATACTCTA TACCGCAGTA TTTTACTTGG TGGCGTACGC GACTTACGTC
    GCCGTATGCG TGCTCGATGC AATGCACACG AACACACCGA ACGATGCAAA TCGCGCAACA
    TCTATTATGA TGCTGAACGT GACAATGAAC TATGACCGAA CAAATAGATC TATGACGTCA
    CAACCTGCAA ATCTGGTACC CCCGCATGGG TTTGAACCCA GTTTGTTATT ACTAGAAGTG
    GCGTCGTGTC TCGTTCTTTT TCATTCCACA ATAGCACCAT CTTTATACAT GGTAAGGCTG
    CTCGGCTTTA GACGTCTTCT CGCCGGTATT CGGTTTAGAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OCi154331
    Clone ID Related Accession (Same CDS sequence) XM_026837151.1
    Accession Version XM_026837151.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1785bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-10-21
    Organism Ciona intestinalis(vase tunicate)
    Product uncharacterized protein LOC100176044 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_020177.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Ciona intestinalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAGTTTCG AAATAAAGAT AGTTGTCCTT CTTCTGTCGG CATGCTGTAC ACTAATCAAC 
    CTCTTTGCAT TGGTTTGCAT CGTAAGCAAC TTCAAACGAC TTCGACAGCG GATGTATATC
    TTCATTATCA ACCTTACCAT TGTTGACGTC ATAGTGGGGG TCGCGTATAT GATCGACGTC
    GTGACCAAGA TCCTTCGAAG CGAAGCCTCT GTGACGTCAC AATCTGAGGG TTTTGGAGCG
    ACAGCGGCGA CGGAAGGCTT GAAAATTGCG TCAATTCTCC TCTCGGCTTT GAACACCAGC
    GTCGTGACGT ACGCCCTACA TAAGCGGACC ACAAGTATGG GGCGCCACCG TGCGGAGTCC
    CTTAACAACG ACACAACGGG GAATCCCCTA CACATCCCTG CCTTCGACAC GATGCTACGT
    GTGTTGTCGC TTGGCACTCA GACACCCAGC GCCAATCGAA AGGGTTCACG CCTCAACCAA
    TCAAGCCCCA GGAAGCAGCC AAGCGTAAAC GGGAATTCTC CAAAGCACAT CAATGGCGAT
    TGCCTCGAAT GCGAGGAAGA AGAAACGAGC TTGGCTAAAA AAAACGCAGA ATCGGACAGA
    CGGATCGGCC AGCAGAGACT TTCGCCCGGA GATAAGCAAG AATCCTCGAG TAAATCACGA
    AGGAAGAAAA GCATGTCACG ACTTACAGCT ATGCTCTTGC CCCGTACAAG CCTCGTCAGC
    ATTCGTCCCT CCAACTTCCC ACGCTCCATG ACGTCATCAA CTTACAGCCA ATCATACGTT
    GGTCGCCATG GCAACTCGGT GGTCAGCGTC CGTACAACAG TCGCCATCTT ATTGGTTATT
    TGGATTGTTT TCCTAATCAC GTGGTTGTTG CCAGTAGCAA CGAGAGCTGT GATGAAAGCA
    AGCGGGTCAT CAAATCAAGT AGCAGAAATT TTTTCTTGCT CTCTGGAGTG CGAAACGGAA
    TATTTTCCAA ATATTGAGCA AACCAATAAT GATGAAAAAA ATCAAAGTCC ATTTTCTGAC
    AGCAATGATT ATGATACGGG CGTAATGGCA TCGAATCTTT CAACCGGCTA CGTGAAAAGT
    GAAGAAAACA GTACAGGACT TCACCCGAAC CCGATACGAC GCATTAGGCA CACAAAATCT
    CGAATCAGGA GATATAAAGA TGCCTTATTT AACGAGAGTG GTTTCGTGGC CCACTCGCTA
    TTAACTGTGA CGTCAGAATC GAACTACACA GACGTCAACT CATCCGGGGA TTTCCCGATT
    CCATGGGAAC AGCGCCCCAT GTGTCCAGAA TCGTGTTCAA ATCTTTTTTA TCCAATCAGC
    AAGCTACACG TGATTTTTCA TGCTCTGGTT ATCACAGTCA CGTGGCTGTT TATGCTCATT
    ATCTCGCTAC GCCTCTTGTG GCTGAGAAAG CATTCGAAGA ACGTGTTTGT GCGCTGTAGC
    GCACTCTGGC GGTTTATACT CTATACCGCA GTATTTTACT TGGTGGCGTA CGCGACTTAC
    GTCGCCGTAT GCGTGCTCGA TGCAATGCAC ACGAACACAC CGAACGATGC AAATCGCGCA
    ACATCTATTA TGATGCTGAA CGTGACAATG AACTATGACC GAACAAATAG ATCTATGACG
    TCACAACCTG CAAATCTGGT ACCCCCGCAT GGGTTTGAAC CCAGTTTGTT ATTACTAGAA
    GTGGCGTCGT GTCTCGTTCT TTTTCATTCC ACAATAGCAC CATCTTTATA CATGGTAAGG
    CTGCTCGGCT TTAGACGTCT TCTCGCCGGT ATTCGGTTTA GATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026692952.1
    CDS267..2051
    Translation

    Target ORF information:

    RefSeq Version XM_026837151.1
    Organism Ciona intestinalis(vase tunicate)
    Definition Ciona intestinalis uncharacterized LOC100176044 (LOC100176044), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_026837151.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAGTTTCG AAATAAAGAT AGTTGTCCTT CTTCTGTCGG CATGCTGTAC ACTAATCAAC 
    CTCTTTGCAT TGGTTTGCAT CGTAAGCAAC TTCAAACGAC TTCGACAGCG GATGTATATC
    TTCATTATCA ACCTTACCAT TGTTGACGTC ATAGTGGGGG TCGCGTATAT GATCGACGTC
    GTGACCAAGA TCCTTCGAAG CGAAGCCTCT GTGACGTCAC AATCTGAGGG TTTTGGAGCG
    ACAGCGGCGA CGGAAGGCTT GAAAATTGCG TCAATTCTCC TCTCGGCTTT GAACACCAGC
    GTCGTGACGT ACGCCCTACA TAAGCGGACC ACAAGTATGG GGCGCCACCG TGCGGAGTCC
    CTTAACAACG ACACAACGGG GAATCCCCTA CACATCCCTG CCTTCGACAC GATGCTACGT
    GTGTTGTCGC TTGGCACTCA GACACCCAGC GCCAATCGAA AGGGTTCACG CCTCAACCAA
    TCAAGCCCCA GGAAGCAGCC AAGCGTAAAC GGGAATTCTC CAAAGCACAT CAATGGCGAT
    TGCCTCGAAT GCGAGGAAGA AGAAACGAGC TTGGCTAAAA AAAACGCAGA ATCGGACAGA
    CGGATCGGCC AGCAGAGACT TTCGCCCGGA GATAAGCAAG AATCCTCGAG TAAATCACGA
    AGGAAGAAAA GCATGTCACG ACTTACAGCT ATGCTCTTGC CCCGTACAAG CCTCGTCAGC
    ATTCGTCCCT CCAACTTCCC ACGCTCCATG ACGTCATCAA CTTACAGCCA ATCATACGTT
    GGTCGCCATG GCAACTCGGT GGTCAGCGTC CGTACAACAG TCGCCATCTT ATTGGTTATT
    TGGATTGTTT TCCTAATCAC GTGGTTGTTG CCAGTAGCAA CGAGAGCTGT GATGAAAGCA
    AGCGGGTCAT CAAATCAAGT AGCAGAAATT TTTTCTTGCT CTCTGGAGTG CGAAACGGAA
    TATTTTCCAA ATATTGAGCA AACCAATAAT GATGAAAAAA ATCAAAGTCC ATTTTCTGAC
    AGCAATGATT ATGATACGGG CGTAATGGCA TCGAATCTTT CAACCGGCTA CGTGAAAAGT
    GAAGAAAACA GTACAGGACT TCACCCGAAC CCGATACGAC GCATTAGGCA CACAAAATCT
    CGAATCAGGA GATATAAAGA TGCCTTATTT AACGAGAGTG GTTTCGTGGC CCACTCGCTA
    TTAACTGTGA CGTCAGAATC GAACTACACA GACGTCAACT CATCCGGGGA TTTCCCGATT
    CCATGGGAAC AGCGCCCCAT GTGTCCAGAA TCGTGTTCAA ATCTTTTTTA TCCAATCAGC
    AAGCTACACG TGATTTTTCA TGCTCTGGTT ATCACAGTCA CGTGGCTGTT TATGCTCATT
    ATCTCGCTAC GCCTCTTGTG GCTGAGAAAG CATTCGAAGA ACGTGTTTGT GCGCTGTAGC
    GCACTCTGGC GGTTTATACT CTATACCGCA GTATTTTACT TGGTGGCGTA CGCGACTTAC
    GTCGCCGTAT GCGTGCTCGA TGCAATGCAC ACGAACACAC CGAACGATGC AAATCGCGCA
    ACATCTATTA TGATGCTGAA CGTGACAATG AACTATGACC GAACAAATAG ATCTATGACG
    TCACAACCTG CAAATCTGGT ACCCCCGCAT GGGTTTGAAC CCAGTTTGTT ATTACTAGAA
    GTGGCGTCGT GTCTCGTTCT TTTTCATTCC ACAATAGCAC CATCTTTATA CATGGTAAGG
    CTGCTCGGCT TTAGACGTCT TCTCGCCGGT ATTCGGTTTA GATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.