Gene Symbol | HMGB1 |
Entrez Gene ID | 403170 |
Full Name | high mobility group box 1 |
Synonyms | HMG1 |
Gene Type | protein-coding |
Organism | Canis lupus familiaris(dog) |
ORF » Species Summary » Canis lupus familiaris » HMGB1 cDNA ORF clone
Gene Symbol | HMGB1 |
Entrez Gene ID | 403170 |
Full Name | high mobility group box 1 |
Synonyms | HMG1 |
Gene Type | protein-coding |
Organism | Canis lupus familiaris(dog) |
mRNA | Protein | Name |
---|---|---|
XM_014107323.1 | XP_013962798.1 | high mobility group protein B1 isoform X1 |
NM_001002937.2 | NP_001002937.1 | high mobility group protein B1 |
XM_022409535.1 | XP_022265243.1 | high mobility group protein B1 isoform X1 |
Bos taurus (cattle) | HMGB1 | NP_788785.1 |
Gallus gallus (chicken) | HMGB1 | NP_990233.1 |
HMGB1 | XP_001100203.1 | |
Canis lupus familiaris (dog) | HMGB1 | NP_001002937.1 |
Rattus norvegicus (Norway rat) | LOC685520 | XP_003749961.1 |
Pan troglodytes (chimpanzee) | HMGB1 | XP_509611.1 |
Danio rerio (zebrafish) | hmgb1a | NP_955849.2 |
Homo sapiens (human) | HMGB1 | NP_002119.1 |
TNF-? induced secretion of HMGB1 from non-immune canine mammary epithelial cells (MTH53A).
Willenbrock S, Braun O, Baumgart J, Lange S, Junghanss C, Heisterkamp A, Nolte I, Bullerdiek J, Murua Escobar H
Cytokine57(2)210-20(2012 Feb)
Quantitative PCR and immunohistochemical analyses of HMGB1 and RAGE expression in canine disseminated histiocytic sarcoma (malignant histiocytosis).
Sterenczak KA, Kleinschmidt S, Wefstaedt P, Eberle N, Hewicker-Trautwein M, Bullerdiek J, Nolte I, Murua Escobar H
Anticancer research31(5)1541-8(2011 May)
Molecular characterization of the canine HMGB1.
Murua Escobar H, Meyer B, Richter A, Becker K, Flohr AM, Bullerdiek J, Nolte I
Cytogenetic and genome research101(1)33-8(2003)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The observed HMGB1 release kinetics showed a clearly time-dependent manner with a peak release 24h after TNF-alpha stimulation, while stimulation with IFN-gamma had only small effects on the HMGB1 release.
Title: TNF-? induced secretion of HMGB1 from non-immune canine mammary epithelial cells (MTH53A).
RAGE and HMGB1 expression down-regulation in canine disseminated histiocytic sarcoma points to a role in the progression of histiocytic disorders
Title: Quantitative PCR and immunohistochemical analyses of HMGB1 and RAGE expression in canine disseminated histiocytic sarcoma (malignant histiocytosis).
The following HMGB1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HMGB1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCe00169 | |
Clone ID Related Accession (Same CDS sequence) | XM_014107323.1 , NM_001002937.2 , XM_022409535.1 | |
Accession Version | NM_001002937.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 648bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-28 | |
Organism | Canis lupus familiaris(dog) | |
Product | high mobility group protein B1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DN349572.1, AY135519.1, DN878449.1, DN355565.1 and AAEX03014230.1. On May 9, 2015 this sequence version replaced NM_001002937.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: DN349572.1, AY135519.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA103936001, SAMEA103936002 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGCAAAG GAGATCCTAA GAAGCCGAGA GGCAAAATGT CATCATATGC ATTCTTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001002937.1 |
CDS | 168..815 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001002937.2 |
1 | ATGGGCAAAG GAGATCCTAA GAAGCCGAGA GGCAAAATGT CATCATATGC ATTCTTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCe00169 | |
Clone ID Related Accession (Same CDS sequence) | XM_014107323.1 , NM_001002937.2 , XM_022409535.1 | |
Accession Version | XM_014107323.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 648bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-16 | |
Organism | Canis lupus familiaris(Dog) | |
Product | high mobility group protein B1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003726102.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Canis lupus familiaris Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCAAAG GAGATCCTAA GAAGCCGAGA GGCAAAATGT CATCATATGC ATTCTTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013962798.1 |
CDS | 38..685 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014107323.1 |
1 | ATGGGCAAAG GAGATCCTAA GAAGCCGAGA GGCAAAATGT CATCATATGC ATTCTTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCe00169 | |
Clone ID Related Accession (Same CDS sequence) | XM_014107323.1 , NM_001002937.2 , XM_022409535.1 | |
Accession Version | XM_022409535.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 648bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-04 | |
Organism | Canis lupus familiaris(dog) | |
Product | high mobility group protein B1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006607.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Canis lupus familiaris Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCAAAG GAGATCCTAA GAAGCCGAGA GGCAAAATGT CATCATATGC ATTCTTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_022265243.1 |
CDS | 175..822 |
Translation |
Target ORF information:
Target ORF information:
|
XM_022409535.1 |
1 | ATGGGCAAAG GAGATCCTAA GAAGCCGAGA GGCAAAATGT CATCATATGC ATTCTTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
TNF-? induced secretion of HMGB1 from non-immune canine mammary epithelial cells (MTH53A). |
Quantitative PCR and immunohistochemical analyses of HMGB1 and RAGE expression in canine disseminated histiocytic sarcoma (malignant histiocytosis). |
Molecular characterization of the canine HMGB1. |