LOC103179120 cDNA ORF clone, Callorhinchus milii(elephant shark)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103179120
Entrez Gene ID	103179120
Full Name	blue-sensitive opsin-like
Synonyms	Rh2
Gene Type	protein-coding
Organism	Callorhinchus milii(elephant shark)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001293047.1	NP_001279976.1	blue-sensitive opsin-like

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Into the blue: gene duplication and loss underlie color vision adaptations in a deep-sea chimaera, the elephant shark Callorhinchus milii.
Davies WL, Carvalho LS, Tay BH, Brenner S, Hunt DM, Venkatesh B
Genome research19(3)415-26(2009 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC103179120 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103179120 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCa391276	NM_001293047.1 Latest version!	Callorhinchus milii blue-sensitive opsin-like (LOC103179120), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103179120 ( NM_001293047.1 ) cDNA ORF clone, Callorhinchus milii(elephant shark) -> NP_001279976.1 Callorhinchus milii blue-sensitive opsin-like (LOC103179120), mRNA.

Price & Availability↑

CloneID	OCa391276
Clone ID Related Accession (Same CDS sequence)	NM_001293047.1
Accession Version	NM_001293047.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2014-05-23
Organism	Callorhinchus milii(elephant shark)
Product	blue-sensitive opsin-like
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AAVX02012006.1. On May 24, 2014 this sequence version replaced XM_007894229.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: EF565168.1 [ECO:0000332] ##Evidence-Data-END##

ATGAACGGCA CAGAAGGGAG TAATTTTTAC ATCCCTATGT CCAACAGGAC TGGTGTAGTT 
CGCAATCCTT TTGAATACCC GCAGTATTAC TTGGCTGACC GATGGCTGTT CTCCTCGATT 
TCGGCTTACA TGTTCCTTCT CATATGTGCT GGGCTACCAA TCAATGGCTT GACACTGCTG 
GTGACAGTCA AACACAAGAA GCTCAGGCAG CCTCTAAATT ACATTCTAGT CAACCTGGCT 
GTCGCCAACC TGGTCATGAT CATGTTCGGA TTCGTGTTAA GCTTCTACAC GACCATGAAC 
GGTTATTTCA TCTTCGGGCC AATCGGCTGT ATTTTTGAAG GTTTCTTCGC AACGCTGGGA 
GGCCAGGTAG CCCTCTGGTC TCTGGTGGTT TTGGCCATAG AAAGGTACAT AGTGATATGC 
AAGCCAATGG GCAACTTCAG GTTTGGGACG TCTCATGCTC TAATGGGAAT GGGCTTCACG 
TGGTTCATGG CTCTAACGGC TGCAGTGCCC CCACTCGTTG GCTGGTCCAG GTTCATCCCA 
GAAGGATTCC AGTGTTCATG TACTCCAGAT TTCTACACCA CGAATCCACT GTACAACAAT 
GACTCTTACC TTATGTACTT GTTTAGCGTG CATTTTGCAT TTCCAGTTAC ACTCATATTC 
TTCTCATATG GACGTTTAAT CTGTAAAGTT AAGGAGGCCG CAGCGCAGCA GCAAGAGTCT 
GCAACCACCC AGAAGGCAGA GAAAGAAGTC ACCCGCATGG TCATTCTAAT GGTCATTGGA 
TTTTTGACCG CTTGGCTACC CTATGCCAGT TTGTCAATCT GGATCTTCAC TCATCAAGGG 
GCATGGATTT CACCTCTACT CATGACTATC CCCTCATTCT TCTCTAAAAG TTCTGTGTTG 
TACAATCCAA TCATCTACAT ACTAATGAAC AAGCAGTTCC GTAGCAGTAT GATCACCACA 
GTGTGCTGCG GCAAGAATCC GTTTGGAGAT GATGATTCTT CATCAGTAAC ATCTCAAAGC 
AAGACAGAGG TTTCTTCCGT ATCAACGAGT CAAGTCTCCC CGGCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001279976.1
CDS	1..1068
Translation	MNGTEGSNFYIPMSNRTGVVRNPFEYPQYYLADRWLFSSISAYMFLLICAGLPINGLTLLVTVKHKKLRQPLNYILVNLAVANLVMIMFGFVLSFYTTMNGYFIFGPIGCIFEGFFATLGGQVALWSLVVLAIERYIVICKPMGNFRFGTSHALMGMGFTWFMALTAAVPPLVGWSRFIPEGFQCSCTPDFYTTNPLYNNDSYLMYLFSVHFAFPVTLIFFSYGRLICKVKEAAAQQQESATTQKAEKEVTRMVILMVIGFLTAWLPYASLSIWIFTHQGAWISPLLMTIPSFFSKSSVLYNPIIYILMNKQFRSSMITTVCCGKNPFGDDDSSSVTSQSKTEVSSVSTSQVSPA

Target ORF information:

RefSeq Version	NM_001293047.1
Organism	Callorhinchus milii(elephant shark)
Definition	Callorhinchus milii blue-sensitive opsin-like (LOC103179120), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001293047.1

ORF Insert Sequence:

ATGAACGGCA CAGAAGGGAG TAATTTTTAC ATCCCTATGT CCAACAGGAC TGGTGTAGTT 
CGCAATCCTT TTGAATACCC GCAGTATTAC TTGGCTGACC GATGGCTGTT CTCCTCGATT 
TCGGCTTACA TGTTCCTTCT CATATGTGCT GGGCTACCAA TCAATGGCTT GACACTGCTG 
GTGACAGTCA AACACAAGAA GCTCAGGCAG CCTCTAAATT ACATTCTAGT CAACCTGGCT 
GTCGCCAACC TGGTCATGAT CATGTTCGGA TTCGTGTTAA GCTTCTACAC GACCATGAAC 
GGTTATTTCA TCTTCGGGCC AATCGGCTGT ATTTTTGAAG GTTTCTTCGC AACGCTGGGA 
GGCCAGGTAG CCCTCTGGTC TCTGGTGGTT TTGGCCATAG AAAGGTACAT AGTGATATGC 
AAGCCAATGG GCAACTTCAG GTTTGGGACG TCTCATGCTC TAATGGGAAT GGGCTTCACG 
TGGTTCATGG CTCTAACGGC TGCAGTGCCC CCACTCGTTG GCTGGTCCAG GTTCATCCCA 
GAAGGATTCC AGTGTTCATG TACTCCAGAT TTCTACACCA CGAATCCACT GTACAACAAT 
GACTCTTACC TTATGTACTT GTTTAGCGTG CATTTTGCAT TTCCAGTTAC ACTCATATTC 
TTCTCATATG GACGTTTAAT CTGTAAAGTT AAGGAGGCCG CAGCGCAGCA GCAAGAGTCT 
GCAACCACCC AGAAGGCAGA GAAAGAAGTC ACCCGCATGG TCATTCTAAT GGTCATTGGA 
TTTTTGACCG CTTGGCTACC CTATGCCAGT TTGTCAATCT GGATCTTCAC TCATCAAGGG 
GCATGGATTT CACCTCTACT CATGACTATC CCCTCATTCT TCTCTAAAAG TTCTGTGTTG 
TACAATCCAA TCATCTACAT ACTAATGAAC AAGCAGTTCC GTAGCAGTAT GATCACCACA 
GTGTGCTGCG GCAAGAATCC GTTTGGAGAT GATGATTCTT CATCAGTAAC ATCTCAAAGC 
AAGACAGAGG TTTCTTCCGT ATCAACGAGT CAAGTCTCCC CGGCATAG