Gene Symbol | tra-1 |
Entrez Gene ID | 176548 |
Full Name | Sex-determining transformer protein 1 |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » tra-1 cDNA ORF clone
Gene Symbol | tra-1 |
Entrez Gene ID | 176548 |
Full Name | Sex-determining transformer protein 1 |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
mRNA | Protein | Name |
---|---|---|
NM_001027709.2 | NP_001022880.2 | Sex-determining transformer protein 1 |
NM_001027709.1 | NP_001022880.1 | Sex-determining transformer protein 1 |
NM_001027710.2 | NP_001022881.1 | Sex-determining transformer protein 1 |
NM_001027710.4 | NP_001022881.2 | Sex-determining transformer protein 1 |
NM_001027710.3 | NP_001022881.2 | Sex-determining transformer protein 1 |
NM_001027709.3 | NP_001022880.2 | Sex-determining transformer protein 1 |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
WDR-5.1 associates with the fog-3 promoter and is required for TRA-1 to bind to fog-3 promoter.
Title: A role for WDR5 in TRA-1/Gli mediated transcriptional control of the sperm/oocyte switch in C. elegans.
TRA-1 promotes female development primarily by preventing the expression of genes involved in male development.
Title: TRA-1 ChIP-seq reveals regulators of sexual differentiation and multilevel feedback in nematode sex determination.
In the proximal germline, sperm-dependent physiological MPK-1 activation results in phosphorylation-based inactivation of NOS-3, FEM-CUL-2-mediated degradation of TRA-1 and the promotion of membrane organization during oogenesis.
Title: MPK-1 ERK controls membrane organization in C. elegans oogenesis via a sex-determination module.
xol-1 is a transcriptional target of the terminal sex-determining factor tra-1.
Title: xol-1, the master sex-switch gene in C. elegans, is a transcriptional target of the terminal sex-determining factor TRA-1.
The C. elegans p97/CDC-48-UFD-1-NPL-4 complex controls the sperm-oocyte switch by regulating CUL-2-mediated TRA-1A proteasome degradation.
Title: Caenorhabditis elegans p97 controls germline-specific sex determination by controlling the TRA-1 level in a CUL-2-dependent manner.
The following tra-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tra-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa340574 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027710.2 | |
Accession Version | NM_001027710.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 864bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-10 | |
Organism | Caenorhabditis elegans | |
Product | Sex-determining transformer protein 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_001027710.1. COMPLETENESS: incomplete on both ends. |
1 | ATGGCCCCCA GTACTGAGGA TCCCGATACG GTTGTCGAGG CTCAACGTCG TGGAAGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022881.1 |
CDS | 1..864 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027710.2 |
1 | ATGGCCCCCA GTACTGAGGA TCCCGATACG GTTGTCGAGG CTCAACGTCG TGGAAGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa602156 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027710.4 , NM_001027710.3 | |
Accession Version | NM_001027710.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 867bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Sex-determining transformer protein 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_001027710.3. |
1 | ATGATGGCCC CCAGTACTGA GGATCCCGAT ACGGTTGTCG AGGCTCAACG TCGTGGAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022881.2 |
CDS | 145..1011 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027710.4 |
1 | ATGATGGCCC CCAGTACTGA GGATCCCGAT ACGGTTGTCG AGGCTCAACG TCGTGGAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa602156 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027710.4 , NM_001027710.3 | |
Accession Version | NM_001027710.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 867bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Sex-determining transformer protein 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 5, 2018 this sequence version replaced NM_001027710.2. COMPLETENESS: incomplete on both ends. |
1 | ATGATGGCCC CCAGTACTGA GGATCCCGAT ACGGTTGTCG AGGCTCAACG TCGTGGAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022881.2 |
CDS | 1..867 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027710.3 |
1 | ATGATGGCCC CCAGTACTGA GGATCCCGAT ACGGTTGTCG AGGCTCAACG TCGTGGAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa340185 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027709.1 | |
Accession Version | NM_001027709.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3330bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-10 | |
Organism | Caenorhabditis elegans | |
Product | Sex-determining transformer protein 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). COMPLETENESS: incomplete on both ends. |
1 | ATGGCCCCCA GTACTGAGGA TCCCGATACG GTTGTCGAGG CTCAACGTCG TGGAAGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022880.1 |
CDS | 1..3330 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027709.1 |
1 | ATGGCCCCCA GTACTGAGGA TCCCGATACG GTTGTCGAGG CTCAACGTCG TGGAAGCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa602155 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027709.2 , NM_001027709.3 | |
Accession Version | NM_001027709.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3333bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Sex-determining transformer protein 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 5, 2018 this sequence version replaced NM_001027709.1. COMPLETENESS: incomplete on both ends. |
1 | ATGATGGCCC CCAGTACTGA GGATCCCGAT ACGGTTGTCG AGGCTCAACG TCGTGGAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022880.2 |
CDS | 1..3333 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027709.2 |
1 | ATGATGGCCC CCAGTACTGA GGATCCCGAT ACGGTTGTCG AGGCTCAACG TCGTGGAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa602155 | |
Clone ID Related Accession (Same CDS sequence) | NM_001027709.2 , NM_001027709.3 | |
Accession Version | NM_001027709.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3333bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Sex-determining transformer protein 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_001027709.2. |
1 | ATGATGGCCC CCAGTACTGA GGATCCCGAT ACGGTTGTCG AGGCTCAACG TCGTGGAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001022880.2 |
CDS | 145..3477 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001027709.3 |
1 | ATGATGGCCC CCAGTACTGA GGATCCCGAT ACGGTTGTCG AGGCTCAACG TCGTGGAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |